RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 CC2D2AQ9P2K1 1620 aa19.85■□□□□ 0.77
COL6A4P2-202ENST00000504443 PPP1R15AO75807 674 aaPredicted RBP19.83■□□□□ 0.77
COL6A4P2-202ENST00000504443 PAK3O75914 559 aaPredicted RBP19.83■□□□□ 0.77
COL6A4P2-202ENST00000504443 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.81■□□□□ 0.76
COL6A4P2-202ENST00000504443 SYNJ1O43426 1573 aa19.81■□□□□ 0.76
COL6A4P2-202ENST00000504443 IL27Q8NEV9 243 aa19.8■□□□□ 0.76
COL6A4P2-202ENST00000504443 NCAPD3P42695 1498 aa19.8■□□□□ 0.76
COL6A4P2-202ENST00000504443 ANP32CO43423 234 aa19.79■□□□□ 0.76
COL6A4P2-202ENST00000504443 MAPKBP1O60336 1514 aa19.78■□□□□ 0.76
COL6A4P2-202ENST00000504443 WDR97A6NE52 1622 aa19.78■□□□□ 0.76
COL6A4P2-202ENST00000504443 SIN3AQ96ST3 1273 aa19.78■□□□□ 0.76
COL6A4P2-202ENST00000504443 RRBP1Q9P2E9 1410 aaKnown RBP19.76■□□□□ 0.75
COL6A4P2-202ENST00000504443 NOP58Q9Y2X3 529 aaKnown RBP19.75■□□□□ 0.75
COL6A4P2-202ENST00000504443 CUX2O14529 1486 aa19.74■□□□□ 0.75
COL6A4P2-202ENST00000504443 HNRNPUQ00839 825 aaKnown RBP eCLIP19.74■□□□□ 0.75
COL6A4P2-202ENST00000504443 RAB3GAP2Q9H2M9 1393 aa19.73■□□□□ 0.75
COL6A4P2-202ENST00000504443 CCER2I3L3R5 266 aa19.72■□□□□ 0.75
COL6A4P2-202ENST00000504443 B4GALNT3Q6L9W6 998 aa19.72■□□□□ 0.75
COL6A4P2-202ENST00000504443 ARAP1Q96P48 1450 aa19.72■□□□□ 0.75
COL6A4P2-202ENST00000504443 CCNB3Q8WWL7 1395 aa19.7■□□□□ 0.74
COL6A4P2-202ENST00000504443 ERICH6BQ5W0A0 696 aa19.64■□□□□ 0.73
COL6A4P2-202ENST00000504443 HMGXB3Q12766 1538 aa19.63■□□□□ 0.73
COL6A4P2-202ENST00000504443 PPP4R2Q9NY27 417 aa19.63■□□□□ 0.73
COL6A4P2-202ENST00000504443 RTL5Q5HYW3 569 aaPredicted RBP19.6■□□□□ 0.73
COL6A4P2-202ENST00000504443 UBE2Q2Q8WVN8 375 aa19.52■□□□□ 0.72
COL6A4P2-202ENST00000504443 SETD5Q9C0A6 1442 aa19.51■□□□□ 0.71
COL6A4P2-202ENST00000504443 NESP48681 1621 aa19.51■□□□□ 0.71
COL6A4P2-202ENST00000504443 ZBTB47Q9UFB7 747 aaPredicted RBP19.47■□□□□ 0.71
COL6A4P2-202ENST00000504443 IPO9Q96P70 1041 aaKnown RBP19.46■□□□□ 0.71
COL6A4P2-202ENST00000504443 EIF5BO60841 1220 aaKnown RBP19.45■□□□□ 0.7
COL6A4P2-202ENST00000504443 PRXQ9BXM0 1461 aa19.45■□□□□ 0.7
COL6A4P2-202ENST00000504443 CCDC184Q52MB2 194 aa19.44■□□□□ 0.7
COL6A4P2-202ENST00000504443 CADPSQ9ULU8 1353 aa19.44■□□□□ 0.7
COL6A4P2-202ENST00000504443 ANP32AP39687 249 aaKnown RBP19.44■□□□□ 0.7
COL6A4P2-202ENST00000504443 FAM50AQ14320 339 aaKnown RBP19.43■□□□□ 0.7
COL6A4P2-202ENST00000504443 CFTRP13569 1480 aa19.42■□□□□ 0.7
COL6A4P2-202ENST00000504443 LAS1LQ9Y4W2 734 aaKnown RBP19.4■□□□□ 0.7
COL6A4P2-202ENST00000504443 ERICH3Q5RHP9 1530 aa19.4■□□□□ 0.7
COL6A4P2-202ENST00000504443 FAM9BQ8IZU0 186 aa19.39■□□□□ 0.7
COL6A4P2-202ENST00000504443 ARHGAP35Q9NRY4 1499 aa19.39■□□□□ 0.69
COL6A4P2-202ENST00000504443 NPM2Q86SE8 214 aaKnown RBP19.38■□□□□ 0.69
COL6A4P2-202ENST00000504443 TIMELESSQ9UNS1 1208 aa19.37■□□□□ 0.69
COL6A4P2-202ENST00000504443 PHLDB1Q86UU1 1377 aa19.37■□□□□ 0.69
COL6A4P2-202ENST00000504443 NEFMP07197 916 aa19.34■□□□□ 0.69
COL6A4P2-202ENST00000504443 BRPF3Q9ULD4 1205 aa19.34■□□□□ 0.69
COL6A4P2-202ENST00000504443 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
COL6A4P2-202ENST00000504443 SENP3-EIF4A1A0A087X0R7 540 aa19.32■□□□□ 0.68
COL6A4P2-202ENST00000504443 TONSLQ96HA7 1378 aa19.31■□□□□ 0.68
COL6A4P2-202ENST00000504443 WASHC2AQ641Q2 1341 aa19.3■□□□□ 0.68
COL6A4P2-202ENST00000504443 TIAM1Q13009 1591 aa19.26■□□□□ 0.67
COL6A4P2-202ENST00000504443 CUX1P39880 1505 aa19.26■□□□□ 0.67
COL6A4P2-202ENST00000504443 FANCD2Q9BXW9 1451 aa19.25■□□□□ 0.67
COL6A4P2-202ENST00000504443 LRRC9Q6ZRR7 1453 aa19.23■□□□□ 0.67
COL6A4P2-202ENST00000504443 CNGB1Q14028 1251 aaPredicted RBP19.22■□□□□ 0.67
COL6A4P2-202ENST00000504443 MRS2Q9HD23 443 aa19.22■□□□□ 0.67
COL6A4P2-202ENST00000504443 AKNAQ7Z591 1439 aa19.2■□□□□ 0.66
COL6A4P2-202ENST00000504443 HSPA5P11021 654 aaKnown RBP19.18■□□□□ 0.66
COL6A4P2-202ENST00000504443 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
COL6A4P2-202ENST00000504443 ZBED9Q6R2W3 1325 aa19.17■□□□□ 0.66
COL6A4P2-202ENST00000504443 WASHC2CQ9Y4E1 1318 aa19.17■□□□□ 0.66
COL6A4P2-202ENST00000504443 ATP1B4Q9UN42 357 aaPredicted RBP19.16■□□□□ 0.66
COL6A4P2-202ENST00000504443 C11orf95C9JLR9 678 aaPredicted RBP19.15■□□□□ 0.66
COL6A4P2-202ENST00000504443 FHAD1B1AJZ9 1412 aa19.14■□□□□ 0.65
COL6A4P2-202ENST00000504443 KIF27Q86VH2 1401 aa19.13■□□□□ 0.65
COL6A4P2-202ENST00000504443 PRKRIP1Q9H875 184 aaPredicted RBP19.13■□□□□ 0.65
COL6A4P2-202ENST00000504443 KDM5BQ9UGL1 1544 aa19.12■□□□□ 0.65
COL6A4P2-202ENST00000504443 P3H3Q8IVL6 736 aa19.11■□□□□ 0.65
COL6A4P2-202ENST00000504443 MAP3K1Q13233 1512 aa19.1■□□□□ 0.65
COL6A4P2-202ENST00000504443 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
COL6A4P2-202ENST00000504443 PKNOX2Q96KN3 472 aa19.09■□□□□ 0.65
COL6A4P2-202ENST00000504443 USP35Q9P2H5 1018 aa19.09■□□□□ 0.65
COL6A4P2-202ENST00000504443 CNTLNQ9NXG0 1405 aa19.08■□□□□ 0.65
COL6A4P2-202ENST00000504443 GSE1Q14687 1217 aa19.07■□□□□ 0.64
COL6A4P2-202ENST00000504443 CCDC18Q5T9S5 1454 aa19.07■□□□□ 0.64
COL6A4P2-202ENST00000504443 FGD5Q6ZNL6 1462 aa19.07■□□□□ 0.64
COL6A4P2-202ENST00000504443 AQRO60306 1485 aaKnown RBP eCLIP19.06■□□□□ 0.64
COL6A4P2-202ENST00000504443 PDS5BQ9NTI5 1447 aa19.05■□□□□ 0.64
COL6A4P2-202ENST00000504443 FRAT1Q92837 279 aaPredicted RBP19.04■□□□□ 0.64
COL6A4P2-202ENST00000504443 NCOA2Q15596 1464 aa19.04■□□□□ 0.64
COL6A4P2-202ENST00000504443 LAMC3Q9Y6N6 1575 aa19.04■□□□□ 0.64
COL6A4P2-202ENST00000504443 PDE4AP27815 886 aa19.04■□□□□ 0.64
COL6A4P2-202ENST00000504443 SLC4A3P48751 1232 aa19.03■□□□□ 0.64
COL6A4P2-202ENST00000504443 PTPRKQ15262 1439 aa19.03■□□□□ 0.64
COL6A4P2-202ENST00000504443 PRDM2Q13029 1718 aa19.02■□□□□ 0.64
COL6A4P2-202ENST00000504443 PPM1GO15355 546 aaPredicted RBP19.02■□□□□ 0.64
COL6A4P2-202ENST00000504443 URB2Q14146 1524 aaKnown RBP19.02■□□□□ 0.64
COL6A4P2-202ENST00000504443 UACAQ9BZF9 1416 aa19.02■□□□□ 0.63
COL6A4P2-202ENST00000504443 EIF4G2P78344 907 aaKnown RBP eCLIP19.02■□□□□ 0.63
COL6A4P2-202ENST00000504443 KIF21AQ7Z4S6 1674 aa19.02■□□□□ 0.63
COL6A4P2-202ENST00000504443 TOPBP1Q92547 1522 aa19■□□□□ 0.63
COL6A4P2-202ENST00000504443 SKAP1Q86WV1 359 aa19■□□□□ 0.63
COL6A4P2-202ENST00000504443 NUDCQ9Y266 331 aa19■□□□□ 0.63
COL6A4P2-202ENST00000504443 PCF11O94913 1555 aaKnown RBP18.99■□□□□ 0.63
COL6A4P2-202ENST00000504443 SMG6Q86US8 1419 aaKnown RBP18.99■□□□□ 0.63
COL6A4P2-202ENST00000504443 NFKBIBQ15653 356 aa18.98■□□□□ 0.63
COL6A4P2-202ENST00000504443 TDRD9Q8NDG6 1382 aaKnown RBP18.98■□□□□ 0.63
COL6A4P2-202ENST00000504443 CCDC7Q96M83 1385 aa18.97■□□□□ 0.63
COL6A4P2-202ENST00000504443 RNF123Q5XPI4 1314 aa18.97■□□□□ 0.63
COL6A4P2-202ENST00000504443 CFAP43Q8NDM7 1665 aa18.96■□□□□ 0.63
COL6A4P2-202ENST00000504443 POLA1P09884 1462 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms