RNA–Protein interactions for RNA: ENST00000504241.1

TRIM7-206, Transcript of tripartite motif containing 7, humanhuman

TSL 2

Gene TRIM7, Length 4,357 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM7-206ENST00000504241 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
TRIM7-206ENST00000504241 NCAPD3P42695 1498 aa16.64■□□□□ 0.25
TRIM7-206ENST00000504241 RAPGEF2Q9Y4G8 1499 aa16.64■□□□□ 0.25
TRIM7-206ENST00000504241 RRP7BPQ9NSQ0 103 aa16.63■□□□□ 0.25
TRIM7-206ENST00000504241 CARMIL1Q5VZK9 1371 aa16.62■□□□□ 0.25
TRIM7-206ENST00000504241 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
TRIM7-206ENST00000504241 FAM9BQ8IZU0 186 aa16.61■□□□□ 0.25
TRIM7-206ENST00000504241 ANP32EQ9BTT0 268 aa16.6■□□□□ 0.25
TRIM7-206ENST00000504241 KANK4Q5T7N3 995 aaPredicted RBP16.58■□□□□ 0.24
TRIM7-206ENST00000504241 NESP48681 1621 aa16.56■□□□□ 0.24
TRIM7-206ENST00000504241 ERCC6Q03468 1493 aa16.56■□□□□ 0.24
TRIM7-206ENST00000504241 SYNJ1O43426 1573 aa16.54■□□□□ 0.24
TRIM7-206ENST00000504241 FANCD2Q9BXW9 1451 aa16.53■□□□□ 0.24
TRIM7-206ENST00000504241 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.53■□□□□ 0.24
TRIM7-206ENST00000504241 SIN3AQ96ST3 1273 aa16.53■□□□□ 0.24
TRIM7-206ENST00000504241 KDM2AQ9Y2K7 1162 aa16.52■□□□□ 0.23
TRIM7-206ENST00000504241 CC2D2AQ9P2K1 1620 aa16.51■□□□□ 0.23
TRIM7-206ENST00000504241 SALL2Q9Y467 1007 aaPredicted RBP16.51■□□□□ 0.23
TRIM7-206ENST00000504241 TSPY4P0CV99 314 aa16.5■□□□□ 0.23
TRIM7-206ENST00000504241 TSPY10P0CW01 314 aa16.5■□□□□ 0.23
TRIM7-206ENST00000504241 RAD54L2Q9Y4B4 1467 aa16.49■□□□□ 0.23
TRIM7-206ENST00000504241 NBR1Q14596 966 aa16.48■□□□□ 0.23
TRIM7-206ENST00000504241 PDS5BQ9NTI5 1447 aa16.48■□□□□ 0.23
TRIM7-206ENST00000504241 MRS2Q9HD23 443 aa16.47■□□□□ 0.23
TRIM7-206ENST00000504241 CHGAP10645 457 aaKnown RBP16.45■□□□□ 0.22
TRIM7-206ENST00000504241 EIF4G2P78344 907 aaKnown RBP eCLIP16.45■□□□□ 0.22
TRIM7-206ENST00000504241 VPS8Q8N3P4 1428 aa16.45■□□□□ 0.22
TRIM7-206ENST00000504241 CCNB3Q8WWL7 1395 aa16.44■□□□□ 0.22
TRIM7-206ENST00000504241 IRX6P78412 446 aaPredicted RBP16.44■□□□□ 0.22
TRIM7-206ENST00000504241 FGD5Q6ZNL6 1462 aa16.43■□□□□ 0.22
TRIM7-206ENST00000504241 CFTRP13569 1480 aa16.42■□□□□ 0.22
TRIM7-206ENST00000504241 TMC1Q8TDI8 760 aa16.42■□□□□ 0.22
TRIM7-206ENST00000504241 CANXP27824 592 aaKnown RBP16.4■□□□□ 0.22
TRIM7-206ENST00000504241 IGF1RP08069 1367 aa16.4■□□□□ 0.22
TRIM7-206ENST00000504241 SENP3-EIF4A1A0A087X0R7 540 aa16.37■□□□□ 0.21
TRIM7-206ENST00000504241 PLEKHD1A6NEE1 506 aa16.36■□□□□ 0.21
TRIM7-206ENST00000504241 NPM2Q86SE8 214 aaKnown RBP16.36■□□□□ 0.21
TRIM7-206ENST00000504241 KCNH8Q96L42 1107 aa16.36■□□□□ 0.21
TRIM7-206ENST00000504241 CFDP1Q9UEE9 299 aaPredicted RBP16.36■□□□□ 0.21
TRIM7-206ENST00000504241 CUX1P39880 1505 aa16.35■□□□□ 0.21
TRIM7-206ENST00000504241 FHOD3Q2V2M9 1422 aa16.35■□□□□ 0.21
TRIM7-206ENST00000504241 HMGXB3Q12766 1538 aa16.34■□□□□ 0.21
TRIM7-206ENST00000504241 RGL3Q3MIN7 710 aa16.33■□□□□ 0.2
TRIM7-206ENST00000504241 RTN4Q9NQC3 1192 aaKnown RBP16.33■□□□□ 0.2
TRIM7-206ENST00000504241 FHAD1B1AJZ9 1412 aa16.32■□□□□ 0.2
TRIM7-206ENST00000504241 ANP32AP39687 249 aaKnown RBP16.3■□□□□ 0.2
TRIM7-206ENST00000504241 PEG3Q9GZU2 1588 aa16.3■□□□□ 0.2
TRIM7-206ENST00000504241 NPM1P06748 294 aaKnown RBP eCLIP16.3■□□□□ 0.2
TRIM7-206ENST00000504241 CCDC136Q96JN2 1154 aa16.29■□□□□ 0.2
TRIM7-206ENST00000504241 AQRO60306 1485 aaKnown RBP eCLIP16.27■□□□□ 0.19
TRIM7-206ENST00000504241 NEFMP07197 916 aa16.24■□□□□ 0.19
TRIM7-206ENST00000504241 TOP2BQ02880 1626 aa16.23■□□□□ 0.19
TRIM7-206ENST00000504241 SENP3Q9H4L4 574 aaPredicted RBP16.22■□□□□ 0.19
TRIM7-206ENST00000504241 SUPT16HQ9Y5B9 1047 aaKnown RBP16.22■□□□□ 0.19
TRIM7-206ENST00000504241 SETD5Q9C0A6 1442 aa16.22■□□□□ 0.19
TRIM7-206ENST00000504241 SLC24A1O60721 1099 aa16.22■□□□□ 0.19
TRIM7-206ENST00000504241 STAG3Q9UJ98 1225 aa16.22■□□□□ 0.19
TRIM7-206ENST00000504241 RAB3GAP2Q9H2M9 1393 aa16.21■□□□□ 0.19
TRIM7-206ENST00000504241 ZBTB47Q9UFB7 747 aaPredicted RBP16.2■□□□□ 0.18
TRIM7-206ENST00000504241 CARD11Q9BXL7 1154 aa16.19■□□□□ 0.18
TRIM7-206ENST00000504241 GAPVD1Q14C86 1478 aa16.18■□□□□ 0.18
TRIM7-206ENST00000504241 POLA1P09884 1462 aaPredicted RBP16.18■□□□□ 0.18
TRIM7-206ENST00000504241 WDR43Q15061 677 aaKnown RBP eCLIP16.18■□□□□ 0.18
TRIM7-206ENST00000504241 FOXD1Q16676 465 aa16.17■□□□□ 0.18
TRIM7-206ENST00000504241 TOPBP1Q92547 1522 aa16.17■□□□□ 0.18
TRIM7-206ENST00000504241 ARAP1Q96P48 1450 aa16.17■□□□□ 0.18
TRIM7-206ENST00000504241 KIF21BO75037 1637 aa16.16■□□□□ 0.18
TRIM7-206ENST00000504241 ESF1Q9H501 851 aaKnown RBP16.16■□□□□ 0.18
TRIM7-206ENST00000504241 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
TRIM7-206ENST00000504241 PRXQ9BXM0 1461 aa16.15■□□□□ 0.18
TRIM7-206ENST00000504241 ARHGAP35Q9NRY4 1499 aa16.14■□□□□ 0.17
TRIM7-206ENST00000504241 TIMELESSQ9UNS1 1208 aa16.14■□□□□ 0.17
TRIM7-206ENST00000504241 JPH4Q96JJ6 628 aa16.1■□□□□ 0.17
TRIM7-206ENST00000504241 GLIPR1L2Q4G1C9 344 aa16.1■□□□□ 0.17
TRIM7-206ENST00000504241 HSPA5P11021 654 aaKnown RBP16.08■□□□□ 0.16
TRIM7-206ENST00000504241 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.07■□□□□ 0.16
TRIM7-206ENST00000504241 DCAF11Q8TEB1 546 aa16.06■□□□□ 0.16
TRIM7-206ENST00000504241 PPP1R15AO75807 674 aaPredicted RBP16.06■□□□□ 0.16
TRIM7-206ENST00000504241 FMN1Q68DA7 1419 aa16.06■□□□□ 0.16
TRIM7-206ENST00000504241 ARXQ96QS3 562 aa16.05■□□□□ 0.16
TRIM7-206ENST00000504241 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.05■□□□□ 0.16
TRIM7-206ENST00000504241 DHX57Q6P158 1386 aaKnown RBP16.04■□□□□ 0.16
TRIM7-206ENST00000504241 DEKP35659 375 aaKnown RBP16.03■□□□□ 0.16
TRIM7-206ENST00000504241 PKD2Q13563 968 aa16.03■□□□□ 0.16
TRIM7-206ENST00000504241 MPHOSPH9Q99550 1183 aa16.03■□□□□ 0.16
TRIM7-206ENST00000504241 TSHZ2Q9NRE2 1034 aa16.02■□□□□ 0.16
TRIM7-206ENST00000504241 KNSTRNQ9Y448 316 aa16.01■□□□□ 0.15
TRIM7-206ENST00000504241 URB2Q14146 1524 aaKnown RBP16.01■□□□□ 0.15
TRIM7-206ENST00000504241 CCER2I3L3R5 266 aa16■□□□□ 0.15
TRIM7-206ENST00000504241 PHLDB1Q86UU1 1377 aa15.99■□□□□ 0.15
TRIM7-206ENST00000504241 CC2D1BQ5T0F9 858 aaKnown RBP15.98■□□□□ 0.15
TRIM7-206ENST00000504241 DNMBPQ6XZF7 1577 aa15.98■□□□□ 0.15
TRIM7-206ENST00000504241 RBM19Q9Y4C8 960 aaKnown RBP15.98■□□□□ 0.15
TRIM7-206ENST00000504241 B4GALNT3Q6L9W6 998 aa15.98■□□□□ 0.15
TRIM7-206ENST00000504241 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
TRIM7-206ENST00000504241 L3MBTL2Q969R5 705 aa15.96■□□□□ 0.15
TRIM7-206ENST00000504241 UPF2Q9HAU5 1272 aaKnown RBP15.95■□□□□ 0.14
TRIM7-206ENST00000504241 ZNF644Q9H582 1327 aaPredicted RBP15.95■□□□□ 0.14
TRIM7-206ENST00000504241 PPP4R2Q9NY27 417 aa15.94■□□□□ 0.14
TRIM7-206ENST00000504241 MRC2Q9UBG0 1479 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms