RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 ABCC8Q09428 1581 aa5.42□□□□□ -1.54
PCDH11X-208ENST00000504220 ERICH6BQ5W0A0 696 aa5.4□□□□□ -1.54
PCDH11X-208ENST00000504220 SAMD1Q6SPF0 538 aaPredicted RBP5.4□□□□□ -1.54
PCDH11X-208ENST00000504220 BIVM-ERCC5R4GMW8 1640 aa5.4□□□□□ -1.54
PCDH11X-208ENST00000504220 ZMYND15Q9H091 742 aa5.4□□□□□ -1.55
PCDH11X-208ENST00000504220 SUPT16HQ9Y5B9 1047 aaKnown RBP5.4□□□□□ -1.55
PCDH11X-208ENST00000504220 TOPBP1Q92547 1522 aa5.39□□□□□ -1.55
PCDH11X-208ENST00000504220 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.39□□□□□ -1.55
PCDH11X-208ENST00000504220 IL27Q8NEV9 243 aa5.39□□□□□ -1.55
PCDH11X-208ENST00000504220 FOXD1Q16676 465 aa5.39□□□□□ -1.55
PCDH11X-208ENST00000504220 IFT140Q96RY7 1462 aa5.38□□□□□ -1.55
PCDH11X-208ENST00000504220 EIF4G3O43432 1585 aaKnown RBP5.37□□□□□ -1.55
PCDH11X-208ENST00000504220 RBM10P98175 930 aaKnown RBP5.37□□□□□ -1.55
PCDH11X-208ENST00000504220 ATP1B4Q9UN42 357 aaPredicted RBP5.37□□□□□ -1.55
PCDH11X-208ENST00000504220 ZEB1P37275 1124 aaPredicted RBP5.37□□□□□ -1.55
PCDH11X-208ENST00000504220 RSPH4AQ5TD94 716 aa5.36□□□□□ -1.55
PCDH11X-208ENST00000504220 CUX1P39880 1505 aa5.36□□□□□ -1.55
PCDH11X-208ENST00000504220 ABCA5Q8WWZ7 1642 aa5.35□□□□□ -1.55
PCDH11X-208ENST00000504220 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.35□□□□□ -1.55
PCDH11X-208ENST00000504220 TRIM41Q8WV44 630 aa5.35□□□□□ -1.55
PCDH11X-208ENST00000504220 PBRM1Q86U86 1689 aa5.35□□□□□ -1.55
PCDH11X-208ENST00000504220 CNGB1Q14028 1251 aaPredicted RBP5.35□□□□□ -1.55
PCDH11X-208ENST00000504220 TOP2BQ02880 1626 aa5.35□□□□□ -1.55
PCDH11X-208ENST00000504220 POLA1P09884 1462 aaPredicted RBP5.33□□□□□ -1.56
PCDH11X-208ENST00000504220 CHD1O14646 1710 aa5.33□□□□□ -1.56
PCDH11X-208ENST00000504220 DHX37Q8IY37 1157 aaKnown RBP5.33□□□□□ -1.56
PCDH11X-208ENST00000504220 PRDM4Q9UKN5 801 aa5.33□□□□□ -1.56
PCDH11X-208ENST00000504220 DEKP35659 375 aaKnown RBP5.32□□□□□ -1.56
PCDH11X-208ENST00000504220 CHMP4AQ9BY43 222 aa5.32□□□□□ -1.56
PCDH11X-208ENST00000504220 UBTFP17480 764 aaKnown RBP5.32□□□□□ -1.56
PCDH11X-208ENST00000504220 CHRM1P11229 460 aaPredicted RBP5.32□□□□□ -1.56
PCDH11X-208ENST00000504220 TAF7LQ5H9L4 462 aa5.31□□□□□ -1.56
PCDH11X-208ENST00000504220 SYNJ1O43426 1573 aa5.31□□□□□ -1.56
PCDH11X-208ENST00000504220 ABCA10Q8WWZ4 1543 aa5.3□□□□□ -1.56
PCDH11X-208ENST00000504220 NEFLP07196 543 aa5.3□□□□□ -1.56
PCDH11X-208ENST00000504220 ZNF608Q9ULD9 1512 aaPredicted RBP5.3□□□□□ -1.56
PCDH11X-208ENST00000504220 FGD5Q6ZNL6 1462 aa5.3□□□□□ -1.56
PCDH11X-208ENST00000504220 RBM19Q9Y4C8 960 aaKnown RBP5.3□□□□□ -1.56
PCDH11X-208ENST00000504220 CLASP1Q7Z460 1538 aa5.29□□□□□ -1.56
PCDH11X-208ENST00000504220 ITGAEP38570 1179 aa5.29□□□□□ -1.56
PCDH11X-208ENST00000504220 PPP6R1Q9UPN7 881 aa5.28□□□□□ -1.56
PCDH11X-208ENST00000504220 MAGI1Q96QZ7 1491 aaPredicted RBP5.28□□□□□ -1.56
PCDH11X-208ENST00000504220 ADAMTS12P58397 1594 aa5.27□□□□□ -1.57
PCDH11X-208ENST00000504220 A0A0U1RQG5 324 aaPredicted RBP5.27□□□□□ -1.57
PCDH11X-208ENST00000504220 SHROOM2Q13796 1616 aa5.26□□□□□ -1.57
PCDH11X-208ENST00000504220 TULP1O00294 542 aaPredicted RBP5.26□□□□□ -1.57
PCDH11X-208ENST00000504220 GTF2E1P29083 439 aaPredicted RBP5.26□□□□□ -1.57
PCDH11X-208ENST00000504220 ERICH3Q5RHP9 1530 aa5.26□□□□□ -1.57
PCDH11X-208ENST00000504220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.26□□□□□ -1.57
PCDH11X-208ENST00000504220 TRIM26Q12899 539 aaPredicted RBP5.26□□□□□ -1.57
PCDH11X-208ENST00000504220 HNRNPUL2Q1KMD3 747 aaKnown RBP5.26□□□□□ -1.57
PCDH11X-208ENST00000504220 POLR3GLQ9BT43 218 aa5.26□□□□□ -1.57
PCDH11X-208ENST00000504220 RIMBP3CA6NJZ7 1639 aa5.25□□□□□ -1.57
PCDH11X-208ENST00000504220 RIMBP3BA6NNM3 1639 aa5.25□□□□□ -1.57
PCDH11X-208ENST00000504220 RIMBP3Q9UFD9 1639 aa5.25□□□□□ -1.57
PCDH11X-208ENST00000504220 RAD54L2Q9Y4B4 1467 aa5.25□□□□□ -1.57
PCDH11X-208ENST00000504220 PAXIP1Q6ZW49 1069 aaPredicted RBP5.25□□□□□ -1.57
PCDH11X-208ENST00000504220 GRIN2BQ13224 1484 aa5.25□□□□□ -1.57
PCDH11X-208ENST00000504220 FANCIQ9NVI1 1328 aa5.24□□□□□ -1.57
PCDH11X-208ENST00000504220 SOGA1O94964 1423 aa5.24□□□□□ -1.57
PCDH11X-208ENST00000504220 KCNG1Q9UIX4 513 aa5.24□□□□□ -1.57
PCDH11X-208ENST00000504220 CUL7Q14999 1698 aa5.24□□□□□ -1.57
PCDH11X-208ENST00000504220 C11orf95C9JLR9 678 aaPredicted RBP5.23□□□□□ -1.57
PCDH11X-208ENST00000504220 BCANQ96GW7 911 aa5.23□□□□□ -1.57
PCDH11X-208ENST00000504220 SYNJ2O15056 1496 aa5.23□□□□□ -1.57
PCDH11X-208ENST00000504220 WRNQ14191 1432 aaPredicted RBP eCLIP5.23□□□□□ -1.57
PCDH11X-208ENST00000504220 SNAPC4Q5SXM2 1469 aa5.23□□□□□ -1.57
PCDH11X-208ENST00000504220 DIEXFQ68CQ4 756 aaKnown RBP5.22□□□□□ -1.57
PCDH11X-208ENST00000504220 AQRO60306 1485 aaKnown RBP eCLIP5.22□□□□□ -1.57
PCDH11X-208ENST00000504220 GAPVD1Q14C86 1478 aa5.22□□□□□ -1.57
PCDH11X-208ENST00000504220 CNKSR2Q8WXI2 1034 aa5.21□□□□□ -1.57
PCDH11X-208ENST00000504220 CEP170Q5SW79 1584 aa5.21□□□□□ -1.58
PCDH11X-208ENST00000504220 RUSC2Q8N2Y8 1516 aa5.21□□□□□ -1.58
PCDH11X-208ENST00000504220 WASHC2CQ9Y4E1 1318 aa5.21□□□□□ -1.58
PCDH11X-208ENST00000504220 ARHGEF11O15085 1522 aa5.2□□□□□ -1.58
PCDH11X-208ENST00000504220 NUP160Q12769 1436 aa5.2□□□□□ -1.58
PCDH11X-208ENST00000504220 WASHC2AQ641Q2 1341 aa5.2□□□□□ -1.58
PCDH11X-208ENST00000504220 RNF216Q9NWF9 866 aaPredicted RBP5.2□□□□□ -1.58
PCDH11X-208ENST00000504220 GRIN2AQ12879 1464 aa5.19□□□□□ -1.58
PCDH11X-208ENST00000504220 BRD2P25440 801 aaKnown RBP5.19□□□□□ -1.58
PCDH11X-208ENST00000504220 FBLN2P98095 1184 aa5.18□□□□□ -1.58
PCDH11X-208ENST00000504220 STAC3Q96MF2 364 aa5.18□□□□□ -1.58
PCDH11X-208ENST00000504220 FHAD1B1AJZ9 1412 aa5.18□□□□□ -1.58
PCDH11X-208ENST00000504220 MIER1Q8N108 512 aa5.18□□□□□ -1.58
PCDH11X-208ENST00000504220 HOMEZQ8IX15 550 aa5.17□□□□□ -1.58
PCDH11X-208ENST00000504220 ARAP1Q96P48 1450 aa5.16□□□□□ -1.58
PCDH11X-208ENST00000504220 TDRD9Q8NDG6 1382 aaKnown RBP5.16□□□□□ -1.58
PCDH11X-208ENST00000504220 OSCARQ8IYS5 282 aa5.16□□□□□ -1.58
PCDH11X-208ENST00000504220 CTTNBP2Q8WZ74 1663 aa5.16□□□□□ -1.58
PCDH11X-208ENST00000504220 NAP1L2Q9ULW6 460 aaPredicted RBP5.15□□□□□ -1.58
PCDH11X-208ENST00000504220 ZFP91Q96JP5 570 aaPredicted RBP5.15□□□□□ -1.58
PCDH11X-208ENST00000504220 VSIG10Q8N0Z9 540 aa5.15□□□□□ -1.59
PCDH11X-208ENST00000504220 CHMP4BQ9H444 224 aaKnown RBP5.15□□□□□ -1.59
PCDH11X-208ENST00000504220 SECISBP2LQ93073 1101 aaKnown RBP5.14□□□□□ -1.59
PCDH11X-208ENST00000504220 PAK3O75914 559 aaPredicted RBP5.13□□□□□ -1.59
PCDH11X-208ENST00000504220 IRX6P78412 446 aaPredicted RBP5.13□□□□□ -1.59
PCDH11X-208ENST00000504220 CLSPNQ9HAW4 1339 aa5.13□□□□□ -1.59
PCDH11X-208ENST00000504220 SENP3Q9H4L4 574 aaPredicted RBP5.13□□□□□ -1.59
PCDH11X-208ENST00000504220 TAOK2Q9UL54 1235 aa5.13□□□□□ -1.59
PCDH11X-208ENST00000504220 ERCC6L2Q5T890 1561 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms