RNA–Protein interactions for RNA: ENST00000504020.2

CCDC110-203, Transcript of coiled-coil domain containing 110, humanhuman

TSL 5

Gene CCDC110, Length 470 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-203ENST00000504020 TSPOAP1O95153 1857 aa10.53□□□□□ -0.72
CCDC110-203ENST00000504020 CERKQ8TCT0 537 aa10.52□□□□□ -0.73
CCDC110-203ENST00000504020 CFTRP13569 1480 aa10.51□□□□□ -0.73
CCDC110-203ENST00000504020 SPINK5Q9NQ38 1064 aaPredicted RBP10.51□□□□□ -0.73
CCDC110-203ENST00000504020 DIP2BQ9P265 1576 aa10.51□□□□□ -0.73
CCDC110-203ENST00000504020 CAPN15O75808 1086 aa10.48□□□□□ -0.73
CCDC110-203ENST00000504020 TOP2BQ02880 1626 aa10.47□□□□□ -0.73
CCDC110-203ENST00000504020 TARBP1Q13395 1621 aaKnown RBP10.47□□□□□ -0.73
CCDC110-203ENST00000504020 TOPBP1Q92547 1522 aa10.43□□□□□ -0.74
CCDC110-203ENST00000504020 CHMP7Q8WUX9 453 aaPredicted RBP10.42□□□□□ -0.74
CCDC110-203ENST00000504020 U3KPZ7 1027 aaPredicted RBP10.42□□□□□ -0.74
CCDC110-203ENST00000504020 MROH2BQ7Z745 1585 aa10.42□□□□□ -0.74
CCDC110-203ENST00000504020 PRDM2Q13029 1718 aa10.41□□□□□ -0.74
CCDC110-203ENST00000504020 MAPKBP1O60336 1514 aa10.41□□□□□ -0.74
CCDC110-203ENST00000504020 SNAPC4Q5SXM2 1469 aa10.41□□□□□ -0.74
CCDC110-203ENST00000504020 MAGI1Q96QZ7 1491 aaPredicted RBP10.36□□□□□ -0.75
CCDC110-203ENST00000504020 PCF11O94913 1555 aaKnown RBP10.35□□□□□ -0.75
CCDC110-203ENST00000504020 ABCC8Q09428 1581 aa10.33□□□□□ -0.76
CCDC110-203ENST00000504020 PPRC1Q5VV67 1664 aaKnown RBP10.31□□□□□ -0.76
CCDC110-203ENST00000504020 CEP170Q5SW79 1584 aa10.31□□□□□ -0.76
CCDC110-203ENST00000504020 NCBP3Q53F19 620 aaKnown RBP10.31□□□□□ -0.76
CCDC110-203ENST00000504020 WDR97A6NE52 1622 aa10.29□□□□□ -0.76
CCDC110-203ENST00000504020 DNMBPQ6XZF7 1577 aa10.29□□□□□ -0.76
CCDC110-203ENST00000504020 TDRD9Q8NDG6 1382 aaKnown RBP10.27□□□□□ -0.76
CCDC110-203ENST00000504020 NPM1P06748 294 aaKnown RBP eCLIP10.27□□□□□ -0.77
CCDC110-203ENST00000504020 COL17A1Q9UMD9 1497 aaPredicted RBP10.27□□□□□ -0.77
CCDC110-203ENST00000504020 SHROOM2Q13796 1616 aa10.26□□□□□ -0.77
CCDC110-203ENST00000504020 POLA1P09884 1462 aaPredicted RBP10.23□□□□□ -0.77
CCDC110-203ENST00000504020 PTPRMP28827 1452 aa10.23□□□□□ -0.77
CCDC110-203ENST00000504020 NPM3O75607 178 aaKnown RBP10.22□□□□□ -0.77
CCDC110-203ENST00000504020 ABCB7O75027 752 aa10.21□□□□□ -0.77
CCDC110-203ENST00000504020 GRIN2BQ13224 1484 aa10.21□□□□□ -0.78
CCDC110-203ENST00000504020 RAD54L2Q9Y4B4 1467 aa10.2□□□□□ -0.78
CCDC110-203ENST00000504020 ADCY10Q96PN6 1610 aa10.19□□□□□ -0.78
CCDC110-203ENST00000504020 WIZO95785 1651 aa10.18□□□□□ -0.78
CCDC110-203ENST00000504020 MED1Q15648 1581 aaPredicted RBP10.18□□□□□ -0.78
CCDC110-203ENST00000504020 ADAMTSL3P82987 1691 aa10.17□□□□□ -0.78
CCDC110-203ENST00000504020 PBRM1Q86U86 1689 aa10.16□□□□□ -0.78
CCDC110-203ENST00000504020 KIF21BO75037 1637 aa10.16□□□□□ -0.78
CCDC110-203ENST00000504020 GLI2P10070 1586 aa10.15□□□□□ -0.78
CCDC110-203ENST00000504020 HSPA2P54652 639 aa10.15□□□□□ -0.78
CCDC110-203ENST00000504020 SOGA1O94964 1423 aa10.15□□□□□ -0.79
CCDC110-203ENST00000504020 CHRDL2Q6WN34 429 aa10.13□□□□□ -0.79
CCDC110-203ENST00000504020 NUP160Q12769 1436 aa10.11□□□□□ -0.79
CCDC110-203ENST00000504020 IQSEC2Q5JU85 1478 aa10.1□□□□□ -0.79
CCDC110-203ENST00000504020 PRG4Q92954 1404 aaPredicted RBP10.09□□□□□ -0.79
CCDC110-203ENST00000504020 SP7Q8TDD2 431 aaPredicted RBP10.09□□□□□ -0.79
CCDC110-203ENST00000504020 GRIN2AQ12879 1464 aa10.09□□□□□ -0.79
CCDC110-203ENST00000504020 TEX14Q8IWB6 1497 aa10.08□□□□□ -0.8
CCDC110-203ENST00000504020 MAP3K4Q9Y6R4 1608 aa10.07□□□□□ -0.8
CCDC110-203ENST00000504020 SRCAPQ6ZRS2 3230 aa10.07□□□□□ -0.8
CCDC110-203ENST00000504020 ZNF219Q9P2Y4 722 aaPredicted RBP10.05□□□□□ -0.8
CCDC110-203ENST00000504020 MADDQ8WXG6 1647 aa10.04□□□□□ -0.8
CCDC110-203ENST00000504020 RBM42Q9BTD8 480 aaKnown RBP10.03□□□□□ -0.8
CCDC110-203ENST00000504020 STRCQ7RTU9 1775 aa10.02□□□□□ -0.81
CCDC110-203ENST00000504020 BCORL1Q5H9F3 1711 aa10.02□□□□□ -0.81
CCDC110-203ENST00000504020 LTBP4Q8N2S1 1624 aa10□□□□□ -0.81
CCDC110-203ENST00000504020 PLB1Q6P1J6 1458 aa9.99□□□□□ -0.81
CCDC110-203ENST00000504020 KIAA0586Q9BVV6 1533 aa9.99□□□□□ -0.81
CCDC110-203ENST00000504020 IFFO2Q5TF58 517 aa9.98□□□□□ -0.81
CCDC110-203ENST00000504020 RIMS1Q86UR5 1692 aaKnown RBP9.98□□□□□ -0.81
CCDC110-203ENST00000504020 ASXL2Q76L83 1435 aa9.98□□□□□ -0.81
CCDC110-203ENST00000504020 FGD5Q6ZNL6 1462 aa9.98□□□□□ -0.81
CCDC110-203ENST00000504020 YEATS2Q9ULM3 1422 aa9.97□□□□□ -0.81
CCDC110-203ENST00000504020 JPH4Q96JJ6 628 aa9.96□□□□□ -0.82
CCDC110-203ENST00000504020 SLC4A2P04920 1241 aa9.95□□□□□ -0.82
CCDC110-203ENST00000504020 APLP2Q06481 763 aa9.95□□□□□ -0.82
CCDC110-203ENST00000504020 TOP2AP11388 1531 aaKnown RBP9.95□□□□□ -0.82
CCDC110-203ENST00000504020 ABCA5Q8WWZ7 1642 aa9.94□□□□□ -0.82
CCDC110-203ENST00000504020 ADAMTS12P58397 1594 aa9.94□□□□□ -0.82
CCDC110-203ENST00000504020 CFAP43Q8NDM7 1665 aa9.93□□□□□ -0.82
CCDC110-203ENST00000504020 EPRSP07814 1512 aaKnown RBP9.93□□□□□ -0.82
CCDC110-203ENST00000504020 PTPRTO14522 1441 aa9.93□□□□□ -0.82
CCDC110-203ENST00000504020 CUL7Q14999 1698 aa9.91□□□□□ -0.82
CCDC110-203ENST00000504020 UBAP1LF5GYI3 381 aa9.91□□□□□ -0.82
CCDC110-203ENST00000504020 ABCC2Q92887 1545 aa9.91□□□□□ -0.82
CCDC110-203ENST00000504020 HSPA1LP34931 641 aa9.9□□□□□ -0.82
CCDC110-203ENST00000504020 PREX1Q8TCU6 1659 aa9.89□□□□□ -0.83
CCDC110-203ENST00000504020 RGS17Q9UGC6 210 aaPredicted RBP9.86□□□□□ -0.83
CCDC110-203ENST00000504020 RUSC2Q8N2Y8 1516 aa9.84□□□□□ -0.83
CCDC110-203ENST00000504020 SETD1AO15047 1707 aaKnown RBP9.83□□□□□ -0.84
CCDC110-203ENST00000504020 CCDC88BA6NC98 1476 aa9.83□□□□□ -0.84
CCDC110-203ENST00000504020 FHAD1B1AJZ9 1412 aa9.82□□□□□ -0.84
CCDC110-203ENST00000504020 MAGI3Q5TCQ9 1506 aa9.82□□□□□ -0.84
CCDC110-203ENST00000504020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.82□□□□□ -0.84
CCDC110-203ENST00000504020 HNRNPUL2Q1KMD3 747 aaKnown RBP9.82□□□□□ -0.84
CCDC110-203ENST00000504020 ABCA10Q8WWZ4 1543 aa9.82□□□□□ -0.84
CCDC110-203ENST00000504020 ARAP3Q8WWN8 1544 aa9.8□□□□□ -0.84
CCDC110-203ENST00000504020 ARID4BQ4LE39 1312 aaPredicted RBP9.8□□□□□ -0.84
CCDC110-203ENST00000504020 CUX1P39880 1505 aa9.78□□□□□ -0.84
CCDC110-203ENST00000504020 HAX1O00165 279 aa9.77□□□□□ -0.85
CCDC110-203ENST00000504020 TTC37Q6PGP7 1564 aa9.76□□□□□ -0.85
CCDC110-203ENST00000504020 SETD1BQ9UPS6 1966 aaKnown RBP9.76□□□□□ -0.85
CCDC110-203ENST00000504020 PIP4P2Q8N4L2 257 aa9.76□□□□□ -0.85
CCDC110-203ENST00000504020 PTPRGP23470 1445 aa9.75□□□□□ -0.85
CCDC110-203ENST00000504020 UHRF1BP1LA0JNW5 1464 aa9.75□□□□□ -0.85
CCDC110-203ENST00000504020 POLA2Q14181 598 aa9.75□□□□□ -0.85
CCDC110-203ENST00000504020 SAMD1Q6SPF0 538 aaPredicted RBP9.75□□□□□ -0.85
CCDC110-203ENST00000504020 FER1L4A9Z1Z3 1794 aa9.75□□□□□ -0.85
CCDC110-203ENST00000504020 CD109Q6YHK3 1445 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms