RNA–Protein interactions for RNA: ENST00000503716.5

LRBA-203, Transcript of LPS responsive beige-like anchor protein, humanhuman

TSL 1 (best)

Gene LRBA, Length 3,712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRBA-203ENST00000503716 RUSC2Q8N2Y8 1516 aa8.94□□□□□ -0.98
LRBA-203ENST00000503716 TAF7LQ5H9L4 462 aa8.92□□□□□ -0.98
LRBA-203ENST00000503716 SAMD1Q6SPF0 538 aaPredicted RBP8.91□□□□□ -0.98
LRBA-203ENST00000503716 PLCB2Q00722 1185 aa8.91□□□□□ -0.98
LRBA-203ENST00000503716 CCDC136Q96JN2 1154 aa8.91□□□□□ -0.98
LRBA-203ENST00000503716 TMEM132AQ24JP5 1023 aa8.9□□□□□ -0.98
LRBA-203ENST00000503716 FBXO3Q9UK99 471 aa8.9□□□□□ -0.99
LRBA-203ENST00000503716 NCAPD3P42695 1498 aa8.89□□□□□ -0.99
LRBA-203ENST00000503716 PEG3Q9GZU2 1588 aa8.88□□□□□ -0.99
LRBA-203ENST00000503716 CDK11BP21127 795 aaKnown RBP8.88□□□□□ -0.99
LRBA-203ENST00000503716 CDK11AQ9UQ88 783 aaPredicted RBP8.88□□□□□ -0.99
LRBA-203ENST00000503716 FAM50AQ14320 339 aaKnown RBP8.87□□□□□ -0.99
LRBA-203ENST00000503716 ZNF316A6NFI3 1004 aaPredicted RBP8.87□□□□□ -0.99
LRBA-203ENST00000503716 BRD2P25440 801 aaKnown RBP8.87□□□□□ -0.99
LRBA-203ENST00000503716 A0A0U1RQG5 324 aaPredicted RBP8.87□□□□□ -0.99
LRBA-203ENST00000503716 CC2D2AQ9P2K1 1620 aa8.86□□□□□ -0.99
LRBA-203ENST00000503716 ANP32EQ9BTT0 268 aa8.85□□□□□ -0.99
LRBA-203ENST00000503716 POLR3GLQ9BT43 218 aa8.84□□□□□ -0.99
LRBA-203ENST00000503716 FGD1P98174 961 aa8.83□□□□□ -1
LRBA-203ENST00000503716 SYNJ1O43426 1573 aa8.83□□□□□ -1
LRBA-203ENST00000503716 KCNH8Q96L42 1107 aa8.82□□□□□ -1
LRBA-203ENST00000503716 CEP162Q5TB80 1403 aa8.81□□□□□ -1
LRBA-203ENST00000503716 CFAP44Q96MT7 982 aa8.8□□□□□ -1
LRBA-203ENST00000503716 NESP48681 1621 aa8.8□□□□□ -1
LRBA-203ENST00000503716 CADPSQ9ULU8 1353 aa8.79□□□□□ -1
LRBA-203ENST00000503716 HMGXB3Q12766 1538 aa8.79□□□□□ -1
LRBA-203ENST00000503716 IRX6P78412 446 aaPredicted RBP8.78□□□□□ -1
LRBA-203ENST00000503716 KANK4Q5T7N3 995 aaPredicted RBP8.78□□□□□ -1
LRBA-203ENST00000503716 TRIM52Q96A61 297 aa8.78□□□□□ -1
LRBA-203ENST00000503716 DDX10Q13206 875 aaKnown RBP8.77□□□□□ -1.01
LRBA-203ENST00000503716 PAXIP1Q6ZW49 1069 aaPredicted RBP8.77□□□□□ -1.01
LRBA-203ENST00000503716 CFTRP13569 1480 aa8.75□□□□□ -1.01
LRBA-203ENST00000503716 SIN3AQ96ST3 1273 aa8.75□□□□□ -1.01
LRBA-203ENST00000503716 CNKSR2Q8WXI2 1034 aa8.74□□□□□ -1.01
LRBA-203ENST00000503716 RAPGEF2Q9Y4G8 1499 aa8.73□□□□□ -1.01
LRBA-203ENST00000503716 CUX1P39880 1505 aa8.72□□□□□ -1.01
LRBA-203ENST00000503716 GOLGA3Q08378 1498 aa8.72□□□□□ -1.01
LRBA-203ENST00000503716 PPP6R1Q9UPN7 881 aa8.72□□□□□ -1.01
LRBA-203ENST00000503716 EEA1Q15075 1411 aa8.72□□□□□ -1.01
LRBA-203ENST00000503716 TNIKQ9UKE5 1360 aa8.72□□□□□ -1.01
LRBA-203ENST00000503716 SALL2Q9Y467 1007 aaPredicted RBP8.71□□□□□ -1.01
LRBA-203ENST00000503716 IGSF3O75054 1194 aa8.71□□□□□ -1.01
LRBA-203ENST00000503716 CUX2O14529 1486 aa8.71□□□□□ -1.02
LRBA-203ENST00000503716 FANCD2Q9BXW9 1451 aa8.71□□□□□ -1.02
LRBA-203ENST00000503716 CHIC2Q9UKJ5 165 aa8.71□□□□□ -1.02
LRBA-203ENST00000503716 ZNF326Q5BKZ1 582 aaKnown RBP8.69□□□□□ -1.02
LRBA-203ENST00000503716 CLIP1P30622 1438 aa8.69□□□□□ -1.02
LRBA-203ENST00000503716 KIF27Q86VH2 1401 aa8.69□□□□□ -1.02
LRBA-203ENST00000503716 CEP164Q9UPV0 1460 aa8.68□□□□□ -1.02
LRBA-203ENST00000503716 RAD54L2Q9Y4B4 1467 aa8.68□□□□□ -1.02
LRBA-203ENST00000503716 TDRD9Q8NDG6 1382 aaKnown RBP8.67□□□□□ -1.02
LRBA-203ENST00000503716 TOP2BQ02880 1626 aa8.67□□□□□ -1.02
LRBA-203ENST00000503716 FGD5Q6ZNL6 1462 aa8.66□□□□□ -1.02
LRBA-203ENST00000503716 FKBP8Q14318 412 aa8.66□□□□□ -1.02
LRBA-203ENST00000503716 NAP1L5Q96NT1 182 aaPredicted RBP8.65□□□□□ -1.03
LRBA-203ENST00000503716 SLC4A1APQ9BWU0 796 aaKnown RBP8.65□□□□□ -1.03
LRBA-203ENST00000503716 HSP90B1P14625 803 aaKnown RBP8.64□□□□□ -1.03
LRBA-203ENST00000503716 AAMPQ13685 434 aa8.63□□□□□ -1.03
LRBA-203ENST00000503716 CARMIL1Q5VZK9 1371 aa8.62□□□□□ -1.03
LRBA-203ENST00000503716 IGF1RP08069 1367 aa8.62□□□□□ -1.03
LRBA-203ENST00000503716 FBLN2P98095 1184 aa8.62□□□□□ -1.03
LRBA-203ENST00000503716 PDS5BQ9NTI5 1447 aa8.61□□□□□ -1.03
LRBA-203ENST00000503716 CLSPNQ9HAW4 1339 aa8.6□□□□□ -1.03
LRBA-203ENST00000503716 FOXD1Q16676 465 aa8.6□□□□□ -1.03
LRBA-203ENST00000503716 SENP3Q9H4L4 574 aaPredicted RBP8.6□□□□□ -1.03
LRBA-203ENST00000503716 PHF23Q9BUL5 403 aaPredicted RBP8.6□□□□□ -1.03
LRBA-203ENST00000503716 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.59□□□□□ -1.03
LRBA-203ENST00000503716 RRP7BPQ9NSQ0 103 aa8.59□□□□□ -1.03
LRBA-203ENST00000503716 TOPBP1Q92547 1522 aa8.59□□□□□ -1.04
LRBA-203ENST00000503716 DEKP35659 375 aaKnown RBP8.58□□□□□ -1.04
LRBA-203ENST00000503716 RBM10P98175 930 aaKnown RBP8.58□□□□□ -1.04
LRBA-203ENST00000503716 KDM2AQ9Y2K7 1162 aa8.58□□□□□ -1.04
LRBA-203ENST00000503716 BIVM-ERCC5R4GMW8 1640 aa8.58□□□□□ -1.04
LRBA-203ENST00000503716 POLA1P09884 1462 aaPredicted RBP8.58□□□□□ -1.04
LRBA-203ENST00000503716 PRXQ9BXM0 1461 aa8.57□□□□□ -1.04
LRBA-203ENST00000503716 URB2Q14146 1524 aaKnown RBP8.56□□□□□ -1.04
LRBA-203ENST00000503716 ZNF777Q9ULD5 760 aaPredicted RBP8.56□□□□□ -1.04
LRBA-203ENST00000503716 SUPT16HQ9Y5B9 1047 aaKnown RBP8.56□□□□□ -1.04
LRBA-203ENST00000503716 ERCC6Q03468 1493 aa8.56□□□□□ -1.04
LRBA-203ENST00000503716 FAM9BQ8IZU0 186 aa8.55□□□□□ -1.04
LRBA-203ENST00000503716 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.55□□□□□ -1.04
LRBA-203ENST00000503716 KIF21BO75037 1637 aa8.55□□□□□ -1.04
LRBA-203ENST00000503716 CCDC9Q9Y3X0 531 aaKnown RBP8.55□□□□□ -1.04
LRBA-203ENST00000503716 RSPH4AQ5TD94 716 aa8.54□□□□□ -1.04
LRBA-203ENST00000503716 VPS8Q8N3P4 1428 aa8.54□□□□□ -1.04
LRBA-203ENST00000503716 AQRO60306 1485 aaKnown RBP eCLIP8.53□□□□□ -1.04
LRBA-203ENST00000503716 HNRNPUQ00839 825 aaKnown RBP eCLIP8.53□□□□□ -1.04
LRBA-203ENST00000503716 ARID3AQ99856 593 aa8.53□□□□□ -1.04
LRBA-203ENST00000503716 ARAP1Q96P48 1450 aa8.52□□□□□ -1.05
LRBA-203ENST00000503716 DNMBPQ6XZF7 1577 aa8.51□□□□□ -1.05
LRBA-203ENST00000503716 LAMC3Q9Y6N6 1575 aa8.51□□□□□ -1.05
LRBA-203ENST00000503716 RSPH6AQ9H0K4 717 aa8.51□□□□□ -1.05
LRBA-203ENST00000503716 GLIPR1L2Q4G1C9 344 aa8.51□□□□□ -1.05
LRBA-203ENST00000503716 BCCIPQ9P287 314 aaKnown RBP eCLIP8.51□□□□□ -1.05
LRBA-203ENST00000503716 MYT1LQ9UL68 1186 aa8.5□□□□□ -1.05
LRBA-203ENST00000503716 FHOD3Q2V2M9 1422 aa8.49□□□□□ -1.05
LRBA-203ENST00000503716 ANP32CO43423 234 aa8.49□□□□□ -1.05
LRBA-203ENST00000503716 BRPF3Q9ULD4 1205 aa8.49□□□□□ -1.05
LRBA-203ENST00000503716 GAPVD1Q14C86 1478 aa8.49□□□□□ -1.05
LRBA-203ENST00000503716 KIF21AQ7Z4S6 1674 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 320 ms