RNA–Protein interactions for RNA: ENST00000503088.1

LIFR-203, Transcript of LIF receptor alpha, humanhuman

TSL 1 (best)

Gene LIFR, Length 2,371 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIFR-203ENST00000503088 POLA1P09884 1462 aaPredicted RBP10.55□□□□□ -0.72
LIFR-203ENST00000503088 URB2Q14146 1524 aaKnown RBP10.55□□□□□ -0.72
LIFR-203ENST00000503088 VPS8Q8N3P4 1428 aa10.53□□□□□ -0.72
LIFR-203ENST00000503088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.53□□□□□ -0.72
LIFR-203ENST00000503088 TPRNQ4KMQ1 711 aa10.53□□□□□ -0.72
LIFR-203ENST00000503088 ARAP1Q96P48 1450 aa10.52□□□□□ -0.73
LIFR-203ENST00000503088 CARMIL1Q5VZK9 1371 aa10.5□□□□□ -0.73
LIFR-203ENST00000503088 SCAF1Q9H7N4 1312 aaKnown RBP10.48□□□□□ -0.73
LIFR-203ENST00000503088 ABCA10Q8WWZ4 1543 aa10.48□□□□□ -0.73
LIFR-203ENST00000503088 NPM2Q86SE8 214 aaKnown RBP10.47□□□□□ -0.73
LIFR-203ENST00000503088 ARHGAP35Q9NRY4 1499 aa10.47□□□□□ -0.73
LIFR-203ENST00000503088 TDRD9Q8NDG6 1382 aaKnown RBP10.47□□□□□ -0.73
LIFR-203ENST00000503088 PDS5BQ9NTI5 1447 aa10.46□□□□□ -0.73
LIFR-203ENST00000503088 WDR97A6NE52 1622 aa10.46□□□□□ -0.74
LIFR-203ENST00000503088 ZEB1P37275 1124 aaPredicted RBP10.45□□□□□ -0.74
LIFR-203ENST00000503088 KANK4Q5T7N3 995 aaPredicted RBP10.45□□□□□ -0.74
LIFR-203ENST00000503088 P3H3Q8IVL6 736 aa10.44□□□□□ -0.74
LIFR-203ENST00000503088 UBE2Q2Q8WVN8 375 aa10.44□□□□□ -0.74
LIFR-203ENST00000503088 HNRNPUL2Q1KMD3 747 aaKnown RBP10.43□□□□□ -0.74
LIFR-203ENST00000503088 GTF3C3Q9Y5Q9 886 aa10.43□□□□□ -0.74
LIFR-203ENST00000503088 CCER1Q8TC90 406 aaPredicted RBP10.42□□□□□ -0.74
LIFR-203ENST00000503088 BCANQ96GW7 911 aa10.41□□□□□ -0.74
LIFR-203ENST00000503088 PDIA4P13667 645 aaKnown RBP10.41□□□□□ -0.74
LIFR-203ENST00000503088 ABCA5Q8WWZ7 1642 aa10.4□□□□□ -0.74
LIFR-203ENST00000503088 TARBP1Q13395 1621 aaKnown RBP10.4□□□□□ -0.75
LIFR-203ENST00000503088 GAPVD1Q14C86 1478 aa10.39□□□□□ -0.75
LIFR-203ENST00000503088 CUL7Q14999 1698 aa10.38□□□□□ -0.75
LIFR-203ENST00000503088 CTTNBP2Q8WZ74 1663 aa10.37□□□□□ -0.75
LIFR-203ENST00000503088 AQRO60306 1485 aaKnown RBP eCLIP10.36□□□□□ -0.75
LIFR-203ENST00000503088 C14orf37Q86TY3 774 aa10.36□□□□□ -0.75
LIFR-203ENST00000503088 FHOD3Q2V2M9 1422 aa10.35□□□□□ -0.75
LIFR-203ENST00000503088 MRC2Q9UBG0 1479 aa10.34□□□□□ -0.75
LIFR-203ENST00000503088 ATP1B4Q9UN42 357 aaPredicted RBP10.34□□□□□ -0.75
LIFR-203ENST00000503088 PBRM1Q86U86 1689 aa10.34□□□□□ -0.75
LIFR-203ENST00000503088 ZNF608Q9ULD9 1512 aaPredicted RBP10.33□□□□□ -0.76
LIFR-203ENST00000503088 PCF11O94913 1555 aaKnown RBP10.33□□□□□ -0.76
LIFR-203ENST00000503088 POTEDQ86YR6 584 aa10.31□□□□□ -0.76
LIFR-203ENST00000503088 TIAM1Q13009 1591 aa10.3□□□□□ -0.76
LIFR-203ENST00000503088 ERCC6Q03468 1493 aa10.28□□□□□ -0.76
LIFR-203ENST00000503088 ITGAEP38570 1179 aa10.28□□□□□ -0.76
LIFR-203ENST00000503088 WDR62O43379 1518 aa10.28□□□□□ -0.76
LIFR-203ENST00000503088 LRRIQ1Q96JM4 1722 aa10.27□□□□□ -0.77
LIFR-203ENST00000503088 ADAMTS12P58397 1594 aa10.26□□□□□ -0.77
LIFR-203ENST00000503088 CFAP43Q8NDM7 1665 aa10.25□□□□□ -0.77
LIFR-203ENST00000503088 THOC2Q8NI27 1593 aaKnown RBP10.25□□□□□ -0.77
LIFR-203ENST00000503088 ACIN1Q9UKV3 1341 aaKnown RBP10.25□□□□□ -0.77
LIFR-203ENST00000503088 EFCAB5A4FU69 1503 aa10.25□□□□□ -0.77
LIFR-203ENST00000503088 LRRC9Q6ZRR7 1453 aa10.25□□□□□ -0.77
LIFR-203ENST00000503088 FHAD1B1AJZ9 1412 aa10.24□□□□□ -0.77
LIFR-203ENST00000503088 RRBP1Q9P2E9 1410 aaKnown RBP10.24□□□□□ -0.77
LIFR-203ENST00000503088 SAMD9Q5K651 1589 aa10.24□□□□□ -0.77
LIFR-203ENST00000503088 PDE4CQ08493 712 aa10.24□□□□□ -0.77
LIFR-203ENST00000503088 PHLDB1Q86UU1 1377 aa10.23□□□□□ -0.77
LIFR-203ENST00000503088 EIF4G3O43432 1585 aaKnown RBP10.23□□□□□ -0.77
LIFR-203ENST00000503088 GRIN2BQ13224 1484 aa10.22□□□□□ -0.77
LIFR-203ENST00000503088 IFT140Q96RY7 1462 aa10.22□□□□□ -0.77
LIFR-203ENST00000503088 PKNOX2Q96KN3 472 aa10.22□□□□□ -0.77
LIFR-203ENST00000503088 CCNB3Q8WWL7 1395 aa10.22□□□□□ -0.77
LIFR-203ENST00000503088 SNAPC4Q5SXM2 1469 aa10.22□□□□□ -0.77
LIFR-203ENST00000503088 CHMP4AQ9BY43 222 aa10.22□□□□□ -0.77
LIFR-203ENST00000503088 FBXO3Q9UK99 471 aa10.22□□□□□ -0.77
LIFR-203ENST00000503088 CASKIN1Q8WXD9 1431 aa10.21□□□□□ -0.77
LIFR-203ENST00000503088 FYCO1Q9BQS8 1478 aa10.21□□□□□ -0.78
LIFR-203ENST00000503088 MAP3K1Q13233 1512 aa10.2□□□□□ -0.78
LIFR-203ENST00000503088 ARID3CA6NKF2 412 aa10.2□□□□□ -0.78
LIFR-203ENST00000503088 PLCB2Q00722 1185 aa10.19□□□□□ -0.78
LIFR-203ENST00000503088 TMEM132AQ24JP5 1023 aa10.19□□□□□ -0.78
LIFR-203ENST00000503088 IQGAP2Q13576 1575 aa10.19□□□□□ -0.78
LIFR-203ENST00000503088 FAM50AQ14320 339 aaKnown RBP10.18□□□□□ -0.78
LIFR-203ENST00000503088 FMN1Q68DA7 1419 aa10.18□□□□□ -0.78
LIFR-203ENST00000503088 HAP1P54257 671 aaPredicted RBP10.17□□□□□ -0.78
LIFR-203ENST00000503088 FBLN2P98095 1184 aa10.16□□□□□ -0.78
LIFR-203ENST00000503088 SAMD1Q6SPF0 538 aaPredicted RBP10.16□□□□□ -0.78
LIFR-203ENST00000503088 CENPBP07199 599 aaPredicted RBP10.15□□□□□ -0.78
LIFR-203ENST00000503088 DHX57Q6P158 1386 aaKnown RBP10.15□□□□□ -0.78
LIFR-203ENST00000503088 MAGI3Q5TCQ9 1506 aa10.14□□□□□ -0.79
LIFR-203ENST00000503088 GRIN2AQ12879 1464 aa10.14□□□□□ -0.79
LIFR-203ENST00000503088 DHX37Q8IY37 1157 aaKnown RBP10.14□□□□□ -0.79
LIFR-203ENST00000503088 MTUS2Q5JR59 1369 aa10.13□□□□□ -0.79
LIFR-203ENST00000503088 CDK13Q14004 1512 aaKnown RBP10.12□□□□□ -0.79
LIFR-203ENST00000503088 CEP170Q5SW79 1584 aa10.12□□□□□ -0.79
LIFR-203ENST00000503088 RAB3GAP2Q9H2M9 1393 aa10.12□□□□□ -0.79
LIFR-203ENST00000503088 CHMP7Q8WUX9 453 aaPredicted RBP10.11□□□□□ -0.79
LIFR-203ENST00000503088 NEUROD1Q13562 356 aa10.11□□□□□ -0.79
LIFR-203ENST00000503088 ANO8Q9HCE9 1232 aaPredicted RBP10.11□□□□□ -0.79
LIFR-203ENST00000503088 DISP1Q96F81 1524 aa10.11□□□□□ -0.79
LIFR-203ENST00000503088 UGGT2Q9NYU1 1516 aa10.1□□□□□ -0.79
LIFR-203ENST00000503088 KIAA0586Q9BVV6 1533 aa10.09□□□□□ -0.79
LIFR-203ENST00000503088 NCOA2Q15596 1464 aa10.09□□□□□ -0.79
LIFR-203ENST00000503088 NEFLP07196 543 aa10.09□□□□□ -0.79
LIFR-203ENST00000503088 KIAA0556O60303 1618 aa10.09□□□□□ -0.79
LIFR-203ENST00000503088 FGD6Q6ZV73 1430 aa10.09□□□□□ -0.79
LIFR-203ENST00000503088 MAGI1Q96QZ7 1491 aaPredicted RBP10.08□□□□□ -0.8
LIFR-203ENST00000503088 EPRSP07814 1512 aaKnown RBP10.08□□□□□ -0.8
LIFR-203ENST00000503088 SUPT6HQ7KZ85 1726 aaKnown RBP10.07□□□□□ -0.8
LIFR-203ENST00000503088 SYNJ2O15056 1496 aa10.07□□□□□ -0.8
LIFR-203ENST00000503088 PTPRKQ15262 1439 aa10.07□□□□□ -0.8
LIFR-203ENST00000503088 HECW1Q76N89 1606 aa10.07□□□□□ -0.8
LIFR-203ENST00000503088 BCL11BQ9C0K0 894 aaPredicted RBP10.07□□□□□ -0.8
LIFR-203ENST00000503088 TAF7LQ5H9L4 462 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms