RNA–Protein interactions for RNA: ENST00000502875.1

TNRC18P1-201, Transcript of trinucleotide repeat containing 18 pseudogene 1, humanhuman

BASIC

Gene TNRC18P1, Length 3,650 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18P1-201ENST00000502875 IGF1RP08069 1367 aa19.07■□□□□ 0.64
TNRC18P1-201ENST00000502875 KCNH8Q96L42 1107 aa19.06■□□□□ 0.64
TNRC18P1-201ENST00000502875 ZNF777Q9ULD5 760 aaPredicted RBP19.04■□□□□ 0.64
TNRC18P1-201ENST00000502875 NCAPD3P42695 1498 aa19.03■□□□□ 0.64
TNRC18P1-201ENST00000502875 SETD5Q9C0A6 1442 aa19.02■□□□□ 0.64
TNRC18P1-201ENST00000502875 MYT1Q01538 1121 aa19.01■□□□□ 0.63
TNRC18P1-201ENST00000502875 TDRD9Q8NDG6 1382 aaKnown RBP19.01■□□□□ 0.63
TNRC18P1-201ENST00000502875 PRXQ9BXM0 1461 aa19.01■□□□□ 0.63
TNRC18P1-201ENST00000502875 FHOD3Q2V2M9 1422 aa19■□□□□ 0.63
TNRC18P1-201ENST00000502875 SUPT16HQ9Y5B9 1047 aaKnown RBP18.99■□□□□ 0.63
TNRC18P1-201ENST00000502875 FHAD1B1AJZ9 1412 aa18.99■□□□□ 0.63
TNRC18P1-201ENST00000502875 ERICH6Q7L0X2 663 aa18.99■□□□□ 0.63
TNRC18P1-201ENST00000502875 HNRNPUQ00839 825 aaKnown RBP eCLIP18.98■□□□□ 0.63
TNRC18P1-201ENST00000502875 TOP2BQ02880 1626 aa18.97■□□□□ 0.63
TNRC18P1-201ENST00000502875 CUX1P39880 1505 aa18.96■□□□□ 0.63
TNRC18P1-201ENST00000502875 ARHGAP35Q9NRY4 1499 aa18.93■□□□□ 0.62
TNRC18P1-201ENST00000502875 PEG3Q9GZU2 1588 aa18.92■□□□□ 0.62
TNRC18P1-201ENST00000502875 IRX6P78412 446 aaPredicted RBP18.92■□□□□ 0.62
TNRC18P1-201ENST00000502875 CFTRP13569 1480 aa18.91■□□□□ 0.62
TNRC18P1-201ENST00000502875 FGD5Q6ZNL6 1462 aa18.91■□□□□ 0.62
TNRC18P1-201ENST00000502875 FAM9BQ8IZU0 186 aa18.89■□□□□ 0.62
TNRC18P1-201ENST00000502875 PHLDB1Q86UU1 1377 aa18.89■□□□□ 0.61
TNRC18P1-201ENST00000502875 RAD54L2Q9Y4B4 1467 aa18.88■□□□□ 0.61
TNRC18P1-201ENST00000502875 PPP1R15AO75807 674 aaPredicted RBP18.87■□□□□ 0.61
TNRC18P1-201ENST00000502875 ERICH3Q5RHP9 1530 aa18.86■□□□□ 0.61
TNRC18P1-201ENST00000502875 FOXD1Q16676 465 aa18.85■□□□□ 0.61
TNRC18P1-201ENST00000502875 FANCD2Q9BXW9 1451 aa18.85■□□□□ 0.61
TNRC18P1-201ENST00000502875 CDK11AQ9UQ88 783 aaPredicted RBP18.84■□□□□ 0.61
TNRC18P1-201ENST00000502875 SENP3-EIF4A1A0A087X0R7 540 aa18.82■□□□□ 0.6
TNRC18P1-201ENST00000502875 RRBP1Q9P2E9 1410 aaKnown RBP18.82■□□□□ 0.6
TNRC18P1-201ENST00000502875 EIF4G2P78344 907 aaKnown RBP eCLIP18.81■□□□□ 0.6
TNRC18P1-201ENST00000502875 SLC4A1APQ9BWU0 796 aaKnown RBP18.81■□□□□ 0.6
TNRC18P1-201ENST00000502875 TIMELESSQ9UNS1 1208 aa18.77■□□□□ 0.59
TNRC18P1-201ENST00000502875 LRRC9Q6ZRR7 1453 aa18.75■□□□□ 0.59
TNRC18P1-201ENST00000502875 MRS2Q9HD23 443 aa18.75■□□□□ 0.59
TNRC18P1-201ENST00000502875 MYT1LQ9UL68 1186 aa18.75■□□□□ 0.59
TNRC18P1-201ENST00000502875 CHMP7Q8WUX9 453 aaPredicted RBP18.75■□□□□ 0.59
TNRC18P1-201ENST00000502875 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
TNRC18P1-201ENST00000502875 FMN1Q68DA7 1419 aa18.73■□□□□ 0.59
TNRC18P1-201ENST00000502875 KDM2AQ9Y2K7 1162 aa18.73■□□□□ 0.59
TNRC18P1-201ENST00000502875 NESP48681 1621 aa18.72■□□□□ 0.59
TNRC18P1-201ENST00000502875 HSPA5P11021 654 aaKnown RBP18.7■□□□□ 0.58
TNRC18P1-201ENST00000502875 DNAJC5BQ9UF47 199 aa18.68■□□□□ 0.58
TNRC18P1-201ENST00000502875 CFDP1Q9UEE9 299 aaPredicted RBP18.67■□□□□ 0.58
TNRC18P1-201ENST00000502875 SALL2Q9Y467 1007 aaPredicted RBP18.65■□□□□ 0.58
TNRC18P1-201ENST00000502875 MPHOSPH9Q99550 1183 aa18.65■□□□□ 0.58
TNRC18P1-201ENST00000502875 CCER2I3L3R5 266 aa18.64■□□□□ 0.57
TNRC18P1-201ENST00000502875 TSHZ2Q9NRE2 1034 aa18.63■□□□□ 0.57
TNRC18P1-201ENST00000502875 L3MBTL2Q969R5 705 aa18.63■□□□□ 0.57
TNRC18P1-201ENST00000502875 BIVM-ERCC5R4GMW8 1640 aa18.62■□□□□ 0.57
TNRC18P1-201ENST00000502875 PDS5BQ9NTI5 1447 aa18.62■□□□□ 0.57
TNRC18P1-201ENST00000502875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.61■□□□□ 0.57
TNRC18P1-201ENST00000502875 FGD6Q6ZV73 1430 aa18.59■□□□□ 0.57
TNRC18P1-201ENST00000502875 TIAM1Q13009 1591 aa18.59■□□□□ 0.57
TNRC18P1-201ENST00000502875 TSPY4P0CV99 314 aa18.59■□□□□ 0.57
TNRC18P1-201ENST00000502875 TSPY10P0CW01 314 aa18.59■□□□□ 0.57
TNRC18P1-201ENST00000502875 CCDC18Q5T9S5 1454 aa18.57■□□□□ 0.56
TNRC18P1-201ENST00000502875 POLA1P09884 1462 aaPredicted RBP18.57■□□□□ 0.56
TNRC18P1-201ENST00000502875 GAPVD1Q14C86 1478 aa18.55■□□□□ 0.56
TNRC18P1-201ENST00000502875 PLEKHD1A6NEE1 506 aa18.55■□□□□ 0.56
TNRC18P1-201ENST00000502875 CASKIN1Q8WXD9 1431 aa18.55■□□□□ 0.56
TNRC18P1-201ENST00000502875 TMC1Q8TDI8 760 aa18.55■□□□□ 0.56
TNRC18P1-201ENST00000502875 CC2D2AQ9P2K1 1620 aa18.54■□□□□ 0.56
TNRC18P1-201ENST00000502875 RGL3Q3MIN7 710 aa18.54■□□□□ 0.56
TNRC18P1-201ENST00000502875 WDR97A6NE52 1622 aa18.53■□□□□ 0.56
TNRC18P1-201ENST00000502875 TOPBP1Q92547 1522 aa18.53■□□□□ 0.56
TNRC18P1-201ENST00000502875 ZNF644Q9H582 1327 aaPredicted RBP18.53■□□□□ 0.56
TNRC18P1-201ENST00000502875 AQRO60306 1485 aaKnown RBP eCLIP18.48■□□□□ 0.55
TNRC18P1-201ENST00000502875 PKD2Q13563 968 aa18.48■□□□□ 0.55
TNRC18P1-201ENST00000502875 NCOA2Q15596 1464 aa18.47■□□□□ 0.55
TNRC18P1-201ENST00000502875 MYOM3Q5VTT5 1437 aa18.47■□□□□ 0.55
TNRC18P1-201ENST00000502875 CARD11Q9BXL7 1154 aa18.46■□□□□ 0.55
TNRC18P1-201ENST00000502875 B4GALNT3Q6L9W6 998 aa18.46■□□□□ 0.55
TNRC18P1-201ENST00000502875 RBM19Q9Y4C8 960 aaKnown RBP18.46■□□□□ 0.55
TNRC18P1-201ENST00000502875 FYCO1Q9BQS8 1478 aa18.46■□□□□ 0.54
TNRC18P1-201ENST00000502875 PCF11O94913 1555 aaKnown RBP18.45■□□□□ 0.54
TNRC18P1-201ENST00000502875 UACAQ9BZF9 1416 aa18.45■□□□□ 0.54
TNRC18P1-201ENST00000502875 ANP32EQ9BTT0 268 aa18.42■□□□□ 0.54
TNRC18P1-201ENST00000502875 CCDC136Q96JN2 1154 aa18.41■□□□□ 0.54
TNRC18P1-201ENST00000502875 DCAF11Q8TEB1 546 aa18.4■□□□□ 0.54
TNRC18P1-201ENST00000502875 WASHC2AQ641Q2 1341 aa18.4■□□□□ 0.54
TNRC18P1-201ENST00000502875 MAPKBP1O60336 1514 aa18.4■□□□□ 0.54
TNRC18P1-201ENST00000502875 ABCA10Q8WWZ4 1543 aa18.39■□□□□ 0.53
TNRC18P1-201ENST00000502875 ERCC6Q03468 1493 aa18.37■□□□□ 0.53
TNRC18P1-201ENST00000502875 DNMBPQ6XZF7 1577 aa18.37■□□□□ 0.53
TNRC18P1-201ENST00000502875 NPM2Q86SE8 214 aaKnown RBP18.35■□□□□ 0.53
TNRC18P1-201ENST00000502875 PRKRIP1Q9H875 184 aaPredicted RBP18.35■□□□□ 0.53
TNRC18P1-201ENST00000502875 PPP4R2Q9NY27 417 aa18.35■□□□□ 0.53
TNRC18P1-201ENST00000502875 HFM1A2PYH4 1435 aa18.35■□□□□ 0.53
TNRC18P1-201ENST00000502875 NAIPQ13075 1403 aa18.34■□□□□ 0.53
TNRC18P1-201ENST00000502875 CCDC184Q52MB2 194 aa18.34■□□□□ 0.53
TNRC18P1-201ENST00000502875 JPH4Q96JJ6 628 aa18.34■□□□□ 0.53
TNRC18P1-201ENST00000502875 MAP3K1Q13233 1512 aa18.33■□□□□ 0.53
TNRC18P1-201ENST00000502875 PTPRKQ15262 1439 aa18.33■□□□□ 0.53
TNRC18P1-201ENST00000502875 HNRNPMP52272 730 aaKnown RBP eCLIP18.33■□□□□ 0.53
TNRC18P1-201ENST00000502875 EFCAB5A4FU69 1503 aa18.33■□□□□ 0.52
TNRC18P1-201ENST00000502875 NUP155O75694 1391 aa18.32■□□□□ 0.52
TNRC18P1-201ENST00000502875 NBPF8Q3BBV2 869 aa18.31■□□□□ 0.52
TNRC18P1-201ENST00000502875 URB2Q14146 1524 aaKnown RBP18.29■□□□□ 0.52
TNRC18P1-201ENST00000502875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms