RNA–Protein interactions for RNA: ENST00000502479.1

LINC00939-201, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best) BASIC

Gene LINC00939, Length 4,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-201ENST00000502479 ARHGAP35Q9NRY4 1499 aa9.39□□□□□ -0.91
LINC00939-201ENST00000502479 IGF1RP08069 1367 aa9.39□□□□□ -0.91
LINC00939-201ENST00000502479 HNRNPUL2Q1KMD3 747 aaKnown RBP9.38□□□□□ -0.91
LINC00939-201ENST00000502479 CCNB3Q8WWL7 1395 aa9.38□□□□□ -0.91
LINC00939-201ENST00000502479 CCDC18Q5T9S5 1454 aa9.37□□□□□ -0.91
LINC00939-201ENST00000502479 RANGAP1P46060 587 aaPredicted RBP9.36□□□□□ -0.91
LINC00939-201ENST00000502479 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.36□□□□□ -0.91
LINC00939-201ENST00000502479 CASKIN1Q8WXD9 1431 aa9.36□□□□□ -0.91
LINC00939-201ENST00000502479 LRRC9Q6ZRR7 1453 aa9.34□□□□□ -0.91
LINC00939-201ENST00000502479 POLA1P09884 1462 aaPredicted RBP9.34□□□□□ -0.92
LINC00939-201ENST00000502479 TIMELESSQ9UNS1 1208 aa9.33□□□□□ -0.92
LINC00939-201ENST00000502479 ABCA5Q8WWZ7 1642 aa9.33□□□□□ -0.92
LINC00939-201ENST00000502479 EHBP1L1Q8N3D4 1523 aa9.32□□□□□ -0.92
LINC00939-201ENST00000502479 HECW1Q76N89 1606 aa9.32□□□□□ -0.92
LINC00939-201ENST00000502479 PCF11O94913 1555 aaKnown RBP9.32□□□□□ -0.92
LINC00939-201ENST00000502479 SETD5Q9C0A6 1442 aa9.31□□□□□ -0.92
LINC00939-201ENST00000502479 MRC2Q9UBG0 1479 aa9.3□□□□□ -0.92
LINC00939-201ENST00000502479 GAPVD1Q14C86 1478 aa9.3□□□□□ -0.92
LINC00939-201ENST00000502479 PBRM1Q86U86 1689 aa9.3□□□□□ -0.92
LINC00939-201ENST00000502479 SUPT6HQ7KZ85 1726 aaKnown RBP9.3□□□□□ -0.92
LINC00939-201ENST00000502479 SAMD9Q5K651 1589 aa9.28□□□□□ -0.92
LINC00939-201ENST00000502479 IFT140Q96RY7 1462 aa9.27□□□□□ -0.93
LINC00939-201ENST00000502479 DHX57Q6P158 1386 aaKnown RBP9.27□□□□□ -0.93
LINC00939-201ENST00000502479 RAD54L2Q9Y4B4 1467 aa9.25□□□□□ -0.93
LINC00939-201ENST00000502479 URB2Q14146 1524 aaKnown RBP9.25□□□□□ -0.93
LINC00939-201ENST00000502479 ATP1B4Q9UN42 357 aaPredicted RBP9.25□□□□□ -0.93
LINC00939-201ENST00000502479 MTUS2Q5JR59 1369 aa9.25□□□□□ -0.93
LINC00939-201ENST00000502479 FAM50AQ14320 339 aaKnown RBP9.24□□□□□ -0.93
LINC00939-201ENST00000502479 GRIN2BQ13224 1484 aa9.23□□□□□ -0.93
LINC00939-201ENST00000502479 ADAMTS12P58397 1594 aa9.23□□□□□ -0.93
LINC00939-201ENST00000502479 IQGAP2Q13576 1575 aa9.23□□□□□ -0.93
LINC00939-201ENST00000502479 MYT1Q01538 1121 aa9.22□□□□□ -0.93
LINC00939-201ENST00000502479 KANK4Q5T7N3 995 aaPredicted RBP9.21□□□□□ -0.93
LINC00939-201ENST00000502479 FHOD3Q2V2M9 1422 aa9.21□□□□□ -0.94
LINC00939-201ENST00000502479 CDK11AQ9UQ88 783 aaPredicted RBP9.21□□□□□ -0.94
LINC00939-201ENST00000502479 TARBP1Q13395 1621 aaKnown RBP9.2□□□□□ -0.94
LINC00939-201ENST00000502479 RAB3GAP2Q9H2M9 1393 aa9.2□□□□□ -0.94
LINC00939-201ENST00000502479 WDR62O43379 1518 aa9.2□□□□□ -0.94
LINC00939-201ENST00000502479 NESP48681 1621 aa9.19□□□□□ -0.94
LINC00939-201ENST00000502479 MYOM3Q5VTT5 1437 aa9.19□□□□□ -0.94
LINC00939-201ENST00000502479 FGD6Q6ZV73 1430 aa9.19□□□□□ -0.94
LINC00939-201ENST00000502479 SNAPC4Q5SXM2 1469 aa9.18□□□□□ -0.94
LINC00939-201ENST00000502479 MIA2Q96PC5 1412 aa9.17□□□□□ -0.94
LINC00939-201ENST00000502479 UGGT2Q9NYU1 1516 aa9.17□□□□□ -0.94
LINC00939-201ENST00000502479 PTPN23Q9H3S7 1636 aa9.16□□□□□ -0.94
LINC00939-201ENST00000502479 AKNAQ7Z591 1439 aa9.16□□□□□ -0.94
LINC00939-201ENST00000502479 TCOF1Q13428 1488 aaKnown RBP9.16□□□□□ -0.94
LINC00939-201ENST00000502479 GCC2Q8IWJ2 1684 aa9.15□□□□□ -0.94
LINC00939-201ENST00000502479 ERICH6Q7L0X2 663 aa9.15□□□□□ -0.94
LINC00939-201ENST00000502479 NCOA2Q15596 1464 aa9.15□□□□□ -0.94
LINC00939-201ENST00000502479 ITGAEP38570 1179 aa9.15□□□□□ -0.94
LINC00939-201ENST00000502479 ITSN2Q9NZM3 1697 aa9.15□□□□□ -0.94
LINC00939-201ENST00000502479 TONSLQ96HA7 1378 aa9.15□□□□□ -0.95
LINC00939-201ENST00000502479 ERCC6Q03468 1493 aa9.14□□□□□ -0.95
LINC00939-201ENST00000502479 MAGI1Q96QZ7 1491 aaPredicted RBP9.14□□□□□ -0.95
LINC00939-201ENST00000502479 PHLDB1Q86UU1 1377 aa9.14□□□□□ -0.95
LINC00939-201ENST00000502479 CARMIL2Q6F5E8 1435 aa9.13□□□□□ -0.95
LINC00939-201ENST00000502479 UACAQ9BZF9 1416 aa9.13□□□□□ -0.95
LINC00939-201ENST00000502479 HFM1A2PYH4 1435 aa9.13□□□□□ -0.95
LINC00939-201ENST00000502479 KIAA0586Q9BVV6 1533 aa9.12□□□□□ -0.95
LINC00939-201ENST00000502479 P3H3Q8IVL6 736 aa9.12□□□□□ -0.95
LINC00939-201ENST00000502479 KIAA0556O60303 1618 aa9.11□□□□□ -0.95
LINC00939-201ENST00000502479 TDRD9Q8NDG6 1382 aaKnown RBP9.11□□□□□ -0.95
LINC00939-201ENST00000502479 RAPGEF6Q8TEU7 1601 aa9.11□□□□□ -0.95
LINC00939-201ENST00000502479 SCAF1Q9H7N4 1312 aaKnown RBP9.1□□□□□ -0.95
LINC00939-201ENST00000502479 ARHGEF11O15085 1522 aa9.1□□□□□ -0.95
LINC00939-201ENST00000502479 MAPKBP1O60336 1514 aa9.1□□□□□ -0.95
LINC00939-201ENST00000502479 EPRSP07814 1512 aaKnown RBP9.09□□□□□ -0.95
LINC00939-201ENST00000502479 GTF3C3Q9Y5Q9 886 aa9.09□□□□□ -0.96
LINC00939-201ENST00000502479 ADGBQ8N7X0 1667 aa9.08□□□□□ -0.96
LINC00939-201ENST00000502479 ROCK1Q13464 1354 aa9.08□□□□□ -0.96
LINC00939-201ENST00000502479 ANP32CO43423 234 aa9.08□□□□□ -0.96
LINC00939-201ENST00000502479 YTHDC1Q96MU7 727 aaKnown RBP9.07□□□□□ -0.96
LINC00939-201ENST00000502479 SYNJ2O15056 1496 aa9.07□□□□□ -0.96
LINC00939-201ENST00000502479 ADCY10Q96PN6 1610 aa9.06□□□□□ -0.96
LINC00939-201ENST00000502479 NEUROD1Q13562 356 aa9.06□□□□□ -0.96
LINC00939-201ENST00000502479 EIF4G3O43432 1585 aaKnown RBP9.06□□□□□ -0.96
LINC00939-201ENST00000502479 GRIN2AQ12879 1464 aa9.06□□□□□ -0.96
LINC00939-201ENST00000502479 MIER1Q8N108 512 aa9.06□□□□□ -0.96
LINC00939-201ENST00000502479 CCER2I3L3R5 266 aa9.06□□□□□ -0.96
LINC00939-201ENST00000502479 NEFLP07196 543 aa9.05□□□□□ -0.96
LINC00939-201ENST00000502479 DNMT1P26358 1616 aaKnown RBP9.04□□□□□ -0.96
LINC00939-201ENST00000502479 KIF14Q15058 1648 aa9.03□□□□□ -0.96
LINC00939-201ENST00000502479 TRIM52Q96A61 297 aa9.03□□□□□ -0.96
LINC00939-201ENST00000502479 LRRIQ1Q96JM4 1722 aa9.03□□□□□ -0.96
LINC00939-201ENST00000502479 CHMP7Q8WUX9 453 aaPredicted RBP9.02□□□□□ -0.97
LINC00939-201ENST00000502479 DAPK1P53355 1430 aa9□□□□□ -0.97
LINC00939-201ENST00000502479 CROCC2H7BZ55 1655 aa8.99□□□□□ -0.97
LINC00939-201ENST00000502479 PPP1R15AO75807 674 aaPredicted RBP8.99□□□□□ -0.97
LINC00939-201ENST00000502479 NAIPQ13075 1403 aa8.99□□□□□ -0.97
LINC00939-201ENST00000502479 SHANK2Q9UPX8 1470 aa8.99□□□□□ -0.97
LINC00939-201ENST00000502479 TROQ12816 1431 aaPredicted RBP8.99□□□□□ -0.97
LINC00939-201ENST00000502479 ANKRD30AQ9BXX3 1397 aa8.98□□□□□ -0.97
LINC00939-201ENST00000502479 RSPH4AQ5TD94 716 aa8.96□□□□□ -0.97
LINC00939-201ENST00000502479 DISP1Q96F81 1524 aa8.96□□□□□ -0.98
LINC00939-201ENST00000502479 PLEKHH2Q8IVE3 1493 aa8.96□□□□□ -0.98
LINC00939-201ENST00000502479 CDK13Q14004 1512 aaKnown RBP8.96□□□□□ -0.98
LINC00939-201ENST00000502479 ADGRL2O95490 1459 aa8.95□□□□□ -0.98
LINC00939-201ENST00000502479 CAMSAP2Q08AD1 1489 aa8.95□□□□□ -0.98
LINC00939-201ENST00000502479 CEP170Q5SW79 1584 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms