RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 CUL7Q14999 1698 aa22.46■■□□□ 1.19
NEAT1-201ENST00000499732 CARMIL1Q5VZK9 1371 aa22.45■■□□□ 1.18
NEAT1-201ENST00000499732 CHMP7Q8WUX9 453 aaPredicted RBP22.44■■□□□ 1.18
NEAT1-201ENST00000499732 CHD1O14646 1710 aa22.44■■□□□ 1.18
NEAT1-201ENST00000499732 GRIN2BQ13224 1484 aa22.43■■□□□ 1.18
NEAT1-201ENST00000499732 SNAPC4Q5SXM2 1469 aa22.43■■□□□ 1.18
NEAT1-201ENST00000499732 MAGI1Q96QZ7 1491 aaPredicted RBP22.42■■□□□ 1.18
NEAT1-201ENST00000499732 CYB5RLQ6IPT4 315 aa22.42■■□□□ 1.18
NEAT1-201ENST00000499732 ADAMTS12P58397 1594 aa22.36■■□□□ 1.17
NEAT1-201ENST00000499732 CLIP1P30622 1438 aa22.34■■□□□ 1.17
NEAT1-201ENST00000499732 SYNJ2O15056 1496 aa22.34■■□□□ 1.17
NEAT1-201ENST00000499732 FHAD1B1AJZ9 1412 aa22.3■■□□□ 1.16
NEAT1-201ENST00000499732 ARAP1Q96P48 1450 aa22.3■■□□□ 1.16
NEAT1-201ENST00000499732 CLASP1Q7Z460 1538 aa22.27■■□□□ 1.16
NEAT1-201ENST00000499732 TRHP20396 242 aaPredicted RBP22.2■■□□□ 1.14
NEAT1-201ENST00000499732 VPS8Q8N3P4 1428 aa22.18■■□□□ 1.14
NEAT1-201ENST00000499732 CTTNBP2Q8WZ74 1663 aa22.17■■□□□ 1.14
NEAT1-201ENST00000499732 GRIN2AQ12879 1464 aa22.16■■□□□ 1.14
NEAT1-201ENST00000499732 RANGAP1P46060 587 aaPredicted RBP22.15■■□□□ 1.14
NEAT1-201ENST00000499732 PELP1Q8IZL8 1130 aaKnown RBP22.11■■□□□ 1.13
NEAT1-201ENST00000499732 ARHGAP35Q9NRY4 1499 aa22.1■■□□□ 1.13
NEAT1-201ENST00000499732 CEP170Q5SW79 1584 aa22.05■■□□□ 1.12
NEAT1-201ENST00000499732 NUP160Q12769 1436 aa22.03■■□□□ 1.12
NEAT1-201ENST00000499732 CCER1Q8TC90 406 aaPredicted RBP22.03■■□□□ 1.12
NEAT1-201ENST00000499732 IQGAP2Q13576 1575 aa22.02■■□□□ 1.12
NEAT1-201ENST00000499732 SCAF1Q9H7N4 1312 aaKnown RBP22.01■■□□□ 1.11
NEAT1-201ENST00000499732 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.99■■□□□ 1.11
NEAT1-201ENST00000499732 KIAA0586Q9BVV6 1533 aa21.98■■□□□ 1.11
NEAT1-201ENST00000499732 EFCAB5A4FU69 1503 aa21.97■■□□□ 1.11
NEAT1-201ENST00000499732 TTBK1Q5TCY1 1321 aaPredicted RBP21.92■■□□□ 1.1
NEAT1-201ENST00000499732 SAMD9Q5K651 1589 aa21.91■■□□□ 1.1
NEAT1-201ENST00000499732 UGGT2Q9NYU1 1516 aa21.89■■□□□ 1.1
NEAT1-201ENST00000499732 APLP2Q06481 763 aa21.87■■□□□ 1.09
NEAT1-201ENST00000499732 SHROOM2Q13796 1616 aa21.86■■□□□ 1.09
NEAT1-201ENST00000499732 ERCC6L2Q5T890 1561 aa21.85■■□□□ 1.09
NEAT1-201ENST00000499732 JPH4Q96JJ6 628 aa21.85■■□□□ 1.09
NEAT1-201ENST00000499732 FHOD3Q2V2M9 1422 aa21.83■■□□□ 1.09
NEAT1-201ENST00000499732 PRG4Q92954 1404 aaPredicted RBP21.83■■□□□ 1.09
NEAT1-201ENST00000499732 P3H3Q8IVL6 736 aa21.83■■□□□ 1.08
NEAT1-201ENST00000499732 KIAA0556O60303 1618 aa21.81■■□□□ 1.08
NEAT1-201ENST00000499732 ACIN1Q9UKV3 1341 aaKnown RBP21.79■■□□□ 1.08
NEAT1-201ENST00000499732 DISP1Q96F81 1524 aa21.79■■□□□ 1.08
NEAT1-201ENST00000499732 PCF11O94913 1555 aaKnown RBP21.79■■□□□ 1.08
NEAT1-201ENST00000499732 FMN1Q68DA7 1419 aa21.78■■□□□ 1.08
NEAT1-201ENST00000499732 DIEXFQ68CQ4 756 aaKnown RBP21.77■■□□□ 1.08
NEAT1-201ENST00000499732 MAP3K1Q13233 1512 aa21.76■■□□□ 1.07
NEAT1-201ENST00000499732 TIAM1Q13009 1591 aa21.75■■□□□ 1.07
NEAT1-201ENST00000499732 KANK4Q5T7N3 995 aaPredicted RBP21.73■■□□□ 1.07
NEAT1-201ENST00000499732 CFAP43Q8NDM7 1665 aa21.72■■□□□ 1.07
NEAT1-201ENST00000499732 FYCO1Q9BQS8 1478 aa21.72■■□□□ 1.07
NEAT1-201ENST00000499732 CARMIL2Q6F5E8 1435 aa21.72■■□□□ 1.07
NEAT1-201ENST00000499732 NPM1P06748 294 aaKnown RBP eCLIP21.7■■□□□ 1.06
NEAT1-201ENST00000499732 CASKIN1Q8WXD9 1431 aa21.7■■□□□ 1.06
NEAT1-201ENST00000499732 CENPBP07199 599 aaPredicted RBP21.69■■□□□ 1.06
NEAT1-201ENST00000499732 NEUROD1Q13562 356 aa21.65■■□□□ 1.06
NEAT1-201ENST00000499732 LRRC9Q6ZRR7 1453 aa21.62■■□□□ 1.05
NEAT1-201ENST00000499732 LRRIQ1Q96JM4 1722 aa21.61■■□□□ 1.05
NEAT1-201ENST00000499732 ZNF316A6NFI3 1004 aaPredicted RBP21.59■■□□□ 1.05
NEAT1-201ENST00000499732 ATP1B4Q9UN42 357 aaPredicted RBP21.57■■□□□ 1.04
NEAT1-201ENST00000499732 HECW1Q76N89 1606 aa21.57■■□□□ 1.04
NEAT1-201ENST00000499732 AEBP2Q6ZN18 517 aaPredicted RBP21.56■■□□□ 1.04
NEAT1-201ENST00000499732 RRBP1Q9P2E9 1410 aaKnown RBP21.55■■□□□ 1.04
NEAT1-201ENST00000499732 RAPGEF6Q8TEU7 1601 aa21.55■■□□□ 1.04
NEAT1-201ENST00000499732 FAM69CQ0P6D2 419 aa21.54■■□□□ 1.04
NEAT1-201ENST00000499732 MAPKBP1O60336 1514 aa21.54■■□□□ 1.04
NEAT1-201ENST00000499732 ABCC10Q5T3U5 1492 aa21.53■■□□□ 1.04
NEAT1-201ENST00000499732 PTPRGP23470 1445 aa21.53■■□□□ 1.04
NEAT1-201ENST00000499732 PLB1Q6P1J6 1458 aa21.52■■□□□ 1.04
NEAT1-201ENST00000499732 CCDC18Q5T9S5 1454 aa21.51■■□□□ 1.03
NEAT1-201ENST00000499732 ABCA8O94911 1581 aa21.5■■□□□ 1.03
NEAT1-201ENST00000499732 ADCY10Q96PN6 1610 aa21.49■■□□□ 1.03
NEAT1-201ENST00000499732 EPRSP07814 1512 aaKnown RBP21.47■■□□□ 1.03
NEAT1-201ENST00000499732 GTF3C3Q9Y5Q9 886 aa21.47■■□□□ 1.03
NEAT1-201ENST00000499732 NUP153P49790 1475 aaKnown RBP21.47■■□□□ 1.03
NEAT1-201ENST00000499732 HNRNPUL2Q1KMD3 747 aaKnown RBP21.45■■□□□ 1.03
NEAT1-201ENST00000499732 CCNB3Q8WWL7 1395 aa21.45■■□□□ 1.02
NEAT1-201ENST00000499732 KIF13AQ9H1H9 1805 aa21.44■■□□□ 1.02
NEAT1-201ENST00000499732 PHLDB1Q86UU1 1377 aa21.44■■□□□ 1.02
NEAT1-201ENST00000499732 CDK13Q14004 1512 aaKnown RBP21.43■■□□□ 1.02
NEAT1-201ENST00000499732 UACAQ9BZF9 1416 aa21.41■■□□□ 1.02
NEAT1-201ENST00000499732 DIP2BQ9P265 1576 aa21.41■■□□□ 1.02
NEAT1-201ENST00000499732 ARID3CA6NKF2 412 aa21.4■■□□□ 1.02
NEAT1-201ENST00000499732 EHBP1L1Q8N3D4 1523 aa21.4■■□□□ 1.02
NEAT1-201ENST00000499732 MTUS2Q5JR59 1369 aa21.38■■□□□ 1.01
NEAT1-201ENST00000499732 ABCC2Q92887 1545 aa21.38■■□□□ 1.01
NEAT1-201ENST00000499732 MAGI3Q5TCQ9 1506 aa21.38■■□□□ 1.01
NEAT1-201ENST00000499732 SUPT6HQ7KZ85 1726 aaKnown RBP21.36■■□□□ 1.01
NEAT1-201ENST00000499732 UHRF1BP1LA0JNW5 1464 aa21.35■■□□□ 1.01
NEAT1-201ENST00000499732 CDK11AQ9UQ88 783 aaPredicted RBP21.34■■□□□ 1.01
NEAT1-201ENST00000499732 CLSPNQ9HAW4 1339 aa21.33■■□□□ 1.01
NEAT1-201ENST00000499732 NCOA2Q15596 1464 aa21.32■■□□□ 1
NEAT1-201ENST00000499732 ATP10BO94823 1461 aa21.31■■□□□ 1
NEAT1-201ENST00000499732 ASXL2Q76L83 1435 aa21.3■■□□□ 1
NEAT1-201ENST00000499732 FGD6Q6ZV73 1430 aa21.27■□□□□ 0.99
NEAT1-201ENST00000499732 ZCCHC11Q5TAX3 1644 aaKnown RBP21.26■□□□□ 0.99
NEAT1-201ENST00000499732 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.26■□□□□ 0.993e-43■□□□□ 11.1
NEAT1-201ENST00000499732 KDM6BO15054 1643 aa21.24■□□□□ 0.99
NEAT1-201ENST00000499732 TROQ12816 1431 aaPredicted RBP21.24■□□□□ 0.99
NEAT1-201ENST00000499732 MYOM3Q5VTT5 1437 aa21.24■□□□□ 0.99
NEAT1-201ENST00000499732 KDM5BQ9UGL1 1544 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms