RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 RIMBP3CA6NJZ7 1639 aa26.38■■□□□ 1.81
SSBP1-214ENST00000498107 RIMBP3BA6NNM3 1639 aa26.38■■□□□ 1.81
SSBP1-214ENST00000498107 SHROOM2Q13796 1616 aa26.38■■□□□ 1.81
SSBP1-214ENST00000498107 RIMBP3Q9UFD9 1639 aa26.38■■□□□ 1.81
SSBP1-214ENST00000498107 JPH4Q96JJ6 628 aa26.36■■□□□ 1.81
SSBP1-214ENST00000498107 KIF21BO75037 1637 aa26.35■■□□□ 1.81
SSBP1-214ENST00000498107 IQGAP2Q13576 1575 aa26.33■■□□□ 1.8
SSBP1-214ENST00000498107 CTTNBP2Q8WZ74 1663 aa26.3■■□□□ 1.8
SSBP1-214ENST00000498107 PRG4Q92954 1404 aaPredicted RBP26.28■■□□□ 1.8
SSBP1-214ENST00000498107 GOLGA3Q08378 1498 aa26.23■■□□□ 1.79
SSBP1-214ENST00000498107 ARAP1Q96P48 1450 aa26.2■■□□□ 1.78
SSBP1-214ENST00000498107 CARMIL2Q6F5E8 1435 aa26.2■■□□□ 1.78
SSBP1-214ENST00000498107 ERCC6L2Q5T890 1561 aa26.19■■□□□ 1.78
SSBP1-214ENST00000498107 UGGT2Q9NYU1 1516 aa26.18■■□□□ 1.78
SSBP1-214ENST00000498107 CYB5RLQ6IPT4 315 aa26.17■■□□□ 1.78
SSBP1-214ENST00000498107 UBTFP17480 764 aaKnown RBP26.15■■□□□ 1.78
SSBP1-214ENST00000498107 EHMT2Q96KQ7 1210 aa26.09■■□□□ 1.77
SSBP1-214ENST00000498107 DISP1Q96F81 1524 aa26.08■■□□□ 1.77
SSBP1-214ENST00000498107 TNIKQ9UKE5 1360 aa26.07■■□□□ 1.76
SSBP1-214ENST00000498107 KIAA0556O60303 1618 aa26.05■■□□□ 1.76
SSBP1-214ENST00000498107 PTPRGP23470 1445 aa26.02■■□□□ 1.76
SSBP1-214ENST00000498107 SAMD9Q5K651 1589 aa25.96■■□□□ 1.75
SSBP1-214ENST00000498107 EFCAB5A4FU69 1503 aa25.94■■□□□ 1.74
SSBP1-214ENST00000498107 RANGAP1P46060 587 aaPredicted RBP25.94■■□□□ 1.74
SSBP1-214ENST00000498107 TTBK1Q5TCY1 1321 aaPredicted RBP25.92■■□□□ 1.74
SSBP1-214ENST00000498107 P3H3Q8IVL6 736 aa25.88■■□□□ 1.73
SSBP1-214ENST00000498107 UACAQ9BZF9 1416 aa25.85■■□□□ 1.73
SSBP1-214ENST00000498107 NPM1P06748 294 aaKnown RBP eCLIP25.83■■□□□ 1.73
SSBP1-214ENST00000498107 UHRF1BP1LA0JNW5 1464 aa25.82■■□□□ 1.72
SSBP1-214ENST00000498107 ADCY10Q96PN6 1610 aa25.81■■□□□ 1.72
SSBP1-214ENST00000498107 FHOD3Q2V2M9 1422 aa25.8■■□□□ 1.72
SSBP1-214ENST00000498107 ABCC2Q92887 1545 aa25.79■■□□□ 1.72
SSBP1-214ENST00000498107 ARHGAP35Q9NRY4 1499 aa25.79■■□□□ 1.72
SSBP1-214ENST00000498107 LOC105371045A0A1W2PR82 267 aa25.77■■□□□ 1.72
SSBP1-214ENST00000498107 ABCA8O94911 1581 aa25.75■■□□□ 1.71
SSBP1-214ENST00000498107 CLIP1P30622 1438 aa25.75■■□□□ 1.71
SSBP1-214ENST00000498107 PLB1Q6P1J6 1458 aa25.74■■□□□ 1.71
SSBP1-214ENST00000498107 FMN1Q68DA7 1419 aa25.71■■□□□ 1.71
SSBP1-214ENST00000498107 RAPGEF6Q8TEU7 1601 aa25.68■■□□□ 1.7
SSBP1-214ENST00000498107 KDM5BQ9UGL1 1544 aa25.68■■□□□ 1.7
SSBP1-214ENST00000498107 CEP162Q5TB80 1403 aa25.67■■□□□ 1.7
SSBP1-214ENST00000498107 MAPKBP1O60336 1514 aa25.66■■□□□ 1.7
SSBP1-214ENST00000498107 ZCCHC11Q5TAX3 1644 aaKnown RBP25.6■■□□□ 1.69
SSBP1-214ENST00000498107 TRHP20396 242 aaPredicted RBP25.58■■□□□ 1.69
SSBP1-214ENST00000498107 NUP153P49790 1475 aaKnown RBP25.55■■□□□ 1.68
SSBP1-214ENST00000498107 ASXL2Q76L83 1435 aa25.54■■□□□ 1.68
SSBP1-214ENST00000498107 HECW1Q76N89 1606 aa25.54■■□□□ 1.68
SSBP1-214ENST00000498107 ATP10BO94823 1461 aa25.53■■□□□ 1.68
SSBP1-214ENST00000498107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.51■■□□□ 1.67
SSBP1-214ENST00000498107 HNRNPUL2Q1KMD3 747 aaKnown RBP25.51■■□□□ 1.67
SSBP1-214ENST00000498107 ATP1B4Q9UN42 357 aaPredicted RBP25.51■■□□□ 1.67
SSBP1-214ENST00000498107 ARID3CA6NKF2 412 aa25.5■■□□□ 1.67
SSBP1-214ENST00000498107 CASKIN1Q8WXD9 1431 aa25.5■■□□□ 1.67
SSBP1-214ENST00000498107 ABCC10Q5T3U5 1492 aa25.49■■□□□ 1.67
SSBP1-214ENST00000498107 FYCO1Q9BQS8 1478 aa25.47■■□□□ 1.67
SSBP1-214ENST00000498107 WDR7Q9Y4E6 1490 aa25.47■■□□□ 1.67
SSBP1-214ENST00000498107 PCF11O94913 1555 aaKnown RBP25.45■■□□□ 1.66
SSBP1-214ENST00000498107 FAM69CQ0P6D2 419 aa25.44■■□□□ 1.66
SSBP1-214ENST00000498107 DIP2BQ9P265 1576 aa25.44■■□□□ 1.66
SSBP1-214ENST00000498107 EPRSP07814 1512 aaKnown RBP25.43■■□□□ 1.66
SSBP1-214ENST00000498107 KIF13AQ9H1H9 1805 aa25.42■■□□□ 1.66
SSBP1-214ENST00000498107 CCDC18Q5T9S5 1454 aa25.41■■□□□ 1.66
SSBP1-214ENST00000498107 PLEKHD1A6NEE1 506 aa25.41■■□□□ 1.66
SSBP1-214ENST00000498107 CDK11AQ9UQ88 783 aaPredicted RBP25.41■■□□□ 1.66
SSBP1-214ENST00000498107 GLI2P10070 1586 aa25.39■■□□□ 1.65
SSBP1-214ENST00000498107 CDK13Q14004 1512 aaKnown RBP25.38■■□□□ 1.65
SSBP1-214ENST00000498107 VPS8Q8N3P4 1428 aa25.37■■□□□ 1.65
SSBP1-214ENST00000498107 KCNH8Q96L42 1107 aa25.35■■□□□ 1.65
SSBP1-214ENST00000498107 LRRIQ1Q96JM4 1722 aa25.32■■□□□ 1.64
SSBP1-214ENST00000498107 CFAP43Q8NDM7 1665 aa25.26■■□□□ 1.63
SSBP1-214ENST00000498107 TROQ12816 1431 aaPredicted RBP25.25■■□□□ 1.63
SSBP1-214ENST00000498107 MAP3K4Q9Y6R4 1608 aa25.25■■□□□ 1.63
SSBP1-214ENST00000498107 ABCA9Q8IUA7 1624 aa25.22■■□□□ 1.63
SSBP1-214ENST00000498107 CD109Q6YHK3 1445 aa25.21■■□□□ 1.63
SSBP1-214ENST00000498107 TSPOAP1O95153 1857 aa25.21■■□□□ 1.63
SSBP1-214ENST00000498107 TEX14Q8IWB6 1497 aa25.19■■□□□ 1.62
SSBP1-214ENST00000498107 KIF14Q15058 1648 aa25.18■■□□□ 1.62
SSBP1-214ENST00000498107 APLP2Q06481 763 aa25.17■■□□□ 1.62
SSBP1-214ENST00000498107 MAGI3Q5TCQ9 1506 aa25.16■■□□□ 1.62
SSBP1-214ENST00000498107 MTUS2Q5JR59 1369 aa25.16■■□□□ 1.62
SSBP1-214ENST00000498107 MAP3K1Q13233 1512 aa25.15■■□□□ 1.62
SSBP1-214ENST00000498107 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.14■■□□□ 1.622e-6■□□□□ 8.3
SSBP1-214ENST00000498107 TIAM1Q13009 1591 aa25.14■■□□□ 1.61
SSBP1-214ENST00000498107 PPRC1Q5VV67 1664 aaKnown RBP25.13■■□□□ 1.61
SSBP1-214ENST00000498107 EHBP1L1Q8N3D4 1523 aa25.11■■□□□ 1.61
SSBP1-214ENST00000498107 TTC37Q6PGP7 1564 aa25.1■■□□□ 1.61
SSBP1-214ENST00000498107 PHLDB1Q86UU1 1377 aa25.05■■□□□ 1.6
SSBP1-214ENST00000498107 MYO5CQ9NQX4 1742 aa25.04■■□□□ 1.6
SSBP1-214ENST00000498107 PLCH2O75038 1416 aa25.03■■□□□ 1.6
SSBP1-214ENST00000498107 LRRC9Q6ZRR7 1453 aa25.03■■□□□ 1.6
SSBP1-214ENST00000498107 ARAP3Q8WWN8 1544 aa25.03■■□□□ 1.6
SSBP1-214ENST00000498107 NEO1Q92859 1461 aa25.02■■□□□ 1.6
SSBP1-214ENST00000498107 CFAP74Q9C0B2 1584 aa25.01■■□□□ 1.59
SSBP1-214ENST00000498107 KDM6BO15054 1643 aa25■■□□□ 1.59
SSBP1-214ENST00000498107 SUPT6HQ7KZ85 1726 aaKnown RBP25■■□□□ 1.59
SSBP1-214ENST00000498107 FANCAO15360 1455 aa24.98■■□□□ 1.59
SSBP1-214ENST00000498107 EFCAB2Q5VUJ9 269 aa24.98■■□□□ 1.59
SSBP1-214ENST00000498107 CCNB3Q8WWL7 1395 aa24.97■■□□□ 1.59
SSBP1-214ENST00000498107 PREX2Q70Z35 1606 aa24.95■■□□□ 1.58
SSBP1-214ENST00000498107 ARHGAP5Q13017 1502 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms