RNA–Protein interactions for RNA: ENST00000497947.6

LMO7-213, Transcript of LIM domain 7, humanhuman

TSL 5

Gene LMO7, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-213ENST00000497947 CLASP1Q7Z460 1538 aa14.02□□□□□ -0.16
LMO7-213ENST00000497947 RAD54L2Q9Y4B4 1467 aa14.02□□□□□ -0.16
LMO7-213ENST00000497947 PELP1Q8IZL8 1130 aaKnown RBP14.02□□□□□ -0.17
LMO7-213ENST00000497947 SLC4A2P04920 1241 aa14.01□□□□□ -0.17
LMO7-213ENST00000497947 SNAPC4Q5SXM2 1469 aa14□□□□□ -0.17
LMO7-213ENST00000497947 WDR97A6NE52 1622 aa14□□□□□ -0.17
LMO7-213ENST00000497947 SYNJ1O43426 1573 aa14□□□□□ -0.17
LMO7-213ENST00000497947 MAGI1Q96QZ7 1491 aaPredicted RBP13.99□□□□□ -0.17
LMO7-213ENST00000497947 SYNJ2O15056 1496 aa13.95□□□□□ -0.18
LMO7-213ENST00000497947 GRIN2BQ13224 1484 aa13.95□□□□□ -0.18
LMO7-213ENST00000497947 GAPVD1Q14C86 1478 aa13.95□□□□□ -0.18
LMO7-213ENST00000497947 FGD5Q6ZNL6 1462 aa13.92□□□□□ -0.18
LMO7-213ENST00000497947 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.191e-8■□□□□ 10.8
LMO7-213ENST00000497947 ZBTB22O15209 634 aa13.87□□□□□ -0.19
LMO7-213ENST00000497947 CUX1P39880 1505 aa13.82□□□□□ -0.2
LMO7-213ENST00000497947 FOXD4L1Q9NU39 408 aa13.81□□□□□ -0.2
LMO7-213ENST00000497947 RNF39Q9H2S5 420 aa13.79□□□□□ -0.2
LMO7-213ENST00000497947 EHMT2Q96KQ7 1210 aa13.78□□□□□ -0.2
LMO7-213ENST00000497947 ABCA10Q8WWZ4 1543 aa13.76□□□□□ -0.21
LMO7-213ENST00000497947 GRIN2AQ12879 1464 aa13.75□□□□□ -0.21
LMO7-213ENST00000497947 ERCC6L2Q5T890 1561 aa13.75□□□□□ -0.21
LMO7-213ENST00000497947 WRNQ14191 1432 aaPredicted RBP eCLIP13.74□□□□□ -0.21
LMO7-213ENST00000497947 FAM9AQ8IZU1 332 aaPredicted RBP13.74□□□□□ -0.21
LMO7-213ENST00000497947 U3KPZ7 1027 aaPredicted RBP13.74□□□□□ -0.21
LMO7-213ENST00000497947 NUP160Q12769 1436 aa13.73□□□□□ -0.21
LMO7-213ENST00000497947 PBRM1Q86U86 1689 aa13.73□□□□□ -0.21
LMO7-213ENST00000497947 CSRNP3Q8WYN3 585 aa13.73□□□□□ -0.21
LMO7-213ENST00000497947 EEA1Q15075 1411 aa13.73□□□□□ -0.21
LMO7-213ENST00000497947 CEP170Q5SW79 1584 aa13.72□□□□□ -0.21
LMO7-213ENST00000497947 ABCA5Q8WWZ7 1642 aa13.71□□□□□ -0.22
LMO7-213ENST00000497947 FAM69CQ0P6D2 419 aa13.69□□□□□ -0.22
LMO7-213ENST00000497947 NPM1P06748 294 aaKnown RBP eCLIP13.68□□□□□ -0.22
LMO7-213ENST00000497947 FHAD1B1AJZ9 1412 aa13.67□□□□□ -0.22
LMO7-213ENST00000497947 SHROOM2Q13796 1616 aa13.66□□□□□ -0.22
LMO7-213ENST00000497947 ILDR1Q86SU0 546 aaPredicted RBP13.66□□□□□ -0.22
LMO7-213ENST00000497947 JPH4Q96JJ6 628 aa13.66□□□□□ -0.22
LMO7-213ENST00000497947 PRG4Q92954 1404 aaPredicted RBP13.65□□□□□ -0.22
LMO7-213ENST00000497947 KDM4FA0A1W2PPD8 638 aa13.65□□□□□ -0.22
LMO7-213ENST00000497947 ABCC10Q5T3U5 1492 aa13.65□□□□□ -0.22
LMO7-213ENST00000497947 KIF13AQ9H1H9 1805 aa13.64□□□□□ -0.23
LMO7-213ENST00000497947 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
LMO7-213ENST00000497947 ADAMTS12P58397 1594 aa13.63□□□□□ -0.23
LMO7-213ENST00000497947 TNIKQ9UKE5 1360 aa13.61□□□□□ -0.23
LMO7-213ENST00000497947 CCER1Q8TC90 406 aaPredicted RBP13.6□□□□□ -0.23
LMO7-213ENST00000497947 MAPKBP1O60336 1514 aa13.59□□□□□ -0.23
LMO7-213ENST00000497947 C1QBPQ07021 282 aaKnown RBP13.58□□□□□ -0.24
LMO7-213ENST00000497947 ERICH3Q5RHP9 1530 aa13.58□□□□□ -0.24
LMO7-213ENST00000497947 CENPBP07199 599 aaPredicted RBP13.57□□□□□ -0.24
LMO7-213ENST00000497947 CEP162Q5TB80 1403 aa13.55□□□□□ -0.24
LMO7-213ENST00000497947 ACIN1Q9UKV3 1341 aaKnown RBP13.54□□□□□ -0.24
LMO7-213ENST00000497947 DIP2BQ9P265 1576 aa13.54□□□□□ -0.24
LMO7-213ENST00000497947 KDM6BO15054 1643 aa13.53□□□□□ -0.24
LMO7-213ENST00000497947 MYT1Q01538 1121 aa13.51□□□□□ -0.25
LMO7-213ENST00000497947 GOLGA3Q08378 1498 aa13.5□□□□□ -0.25
LMO7-213ENST00000497947 TOP2BQ02880 1626 aa13.5□□□□□ -0.25
LMO7-213ENST00000497947 ADCY10Q96PN6 1610 aa13.47□□□□□ -0.25
LMO7-213ENST00000497947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.47□□□□□ -0.25
LMO7-213ENST00000497947 HNRNPUL2Q1KMD3 747 aaKnown RBP13.47□□□□□ -0.25
LMO7-213ENST00000497947 BIVM-ERCC5R4GMW8 1640 aa13.46□□□□□ -0.25
LMO7-213ENST00000497947 DIEXFQ68CQ4 756 aaKnown RBP13.46□□□□□ -0.25
LMO7-213ENST00000497947 SAMD1Q6SPF0 538 aaPredicted RBP13.45□□□□□ -0.26
LMO7-213ENST00000497947 RUSC2Q8N2Y8 1516 aa13.44□□□□□ -0.26
LMO7-213ENST00000497947 KIAA0586Q9BVV6 1533 aa13.44□□□□□ -0.26
LMO7-213ENST00000497947 PTPRGP23470 1445 aa13.41□□□□□ -0.26
LMO7-213ENST00000497947 KIF21BO75037 1637 aa13.41□□□□□ -0.26
LMO7-213ENST00000497947 ADGRL1O94910 1474 aa13.4□□□□□ -0.26
LMO7-213ENST00000497947 TSPOAP1O95153 1857 aa13.4□□□□□ -0.26
LMO7-213ENST00000497947 ZNF316A6NFI3 1004 aaPredicted RBP13.38□□□□□ -0.27
LMO7-213ENST00000497947 PLB1Q6P1J6 1458 aa13.37□□□□□ -0.27
LMO7-213ENST00000497947 CACNB1Q02641 598 aaPredicted RBP13.37□□□□□ -0.27
LMO7-213ENST00000497947 IGF1RP08069 1367 aa13.36□□□□□ -0.27
LMO7-213ENST00000497947 ABCC2Q92887 1545 aa13.36□□□□□ -0.27
LMO7-213ENST00000497947 SPINK5Q9NQ38 1064 aaPredicted RBP13.36□□□□□ -0.27
LMO7-213ENST00000497947 ATXN8OSP0DMR3 200 aa13.35□□□□□ -0.27
LMO7-213ENST00000497947 UBTFP17480 764 aaKnown RBP13.35□□□□□ -0.27
LMO7-213ENST00000497947 NEUROD1Q13562 356 aa13.35□□□□□ -0.27
LMO7-213ENST00000497947 ASXL2Q76L83 1435 aa13.35□□□□□ -0.27
LMO7-213ENST00000497947 GLI2P10070 1586 aa13.34□□□□□ -0.27
LMO7-213ENST00000497947 CARMIL2Q6F5E8 1435 aa13.33□□□□□ -0.28
LMO7-213ENST00000497947 ATF5Q9Y2D1 282 aaPredicted RBP13.33□□□□□ -0.28
LMO7-213ENST00000497947 TTBK1Q5TCY1 1321 aaPredicted RBP13.33□□□□□ -0.28
LMO7-213ENST00000497947 APLP2Q06481 763 aa13.32□□□□□ -0.28
LMO7-213ENST00000497947 HECW2Q9P2P5 1572 aa13.32□□□□□ -0.28
LMO7-213ENST00000497947 COL17A1Q9UMD9 1497 aaPredicted RBP13.31□□□□□ -0.28
LMO7-213ENST00000497947 KIF27Q86VH2 1401 aa13.3□□□□□ -0.28
LMO7-213ENST00000497947 VPS8Q8N3P4 1428 aa13.3□□□□□ -0.28
LMO7-213ENST00000497947 UHRF1BP1LA0JNW5 1464 aa13.29□□□□□ -0.28
LMO7-213ENST00000497947 CLSPNQ9HAW4 1339 aa13.29□□□□□ -0.28
LMO7-213ENST00000497947 TEX14Q8IWB6 1497 aa13.29□□□□□ -0.28
LMO7-213ENST00000497947 CUL7Q14999 1698 aa13.28□□□□□ -0.28
LMO7-213ENST00000497947 FBXO41Q8TF61 875 aa13.28□□□□□ -0.28
LMO7-213ENST00000497947 CLIP1P30622 1438 aa13.28□□□□□ -0.28
LMO7-213ENST00000497947 PPRC1Q5VV67 1664 aaKnown RBP13.28□□□□□ -0.28
LMO7-213ENST00000497947 GTF3C3Q9Y5Q9 886 aa13.27□□□□□ -0.29
LMO7-213ENST00000497947 UACAQ9BZF9 1416 aa13.27□□□□□ -0.29
LMO7-213ENST00000497947 EPRSP07814 1512 aaKnown RBP13.26□□□□□ -0.29
LMO7-213ENST00000497947 CARMIL1Q5VZK9 1371 aa13.25□□□□□ -0.29
LMO7-213ENST00000497947 KDM5BQ9UGL1 1544 aa13.23□□□□□ -0.29
LMO7-213ENST00000497947 CAPN15O75808 1086 aa13.23□□□□□ -0.29
LMO7-213ENST00000497947 MAP3K4Q9Y6R4 1608 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms