RNA–Protein interactions for RNA: ENST00000497742.6

NICN1-207, Transcript of nicolin 1, humanhuman

TSL 5

Gene NICN1, Length 1,743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1-207ENST00000497742 SHROOM2Q13796 1616 aa18.06■□□□□ 0.48
NICN1-207ENST00000497742 KIF21BO75037 1637 aa18.05■□□□□ 0.48
NICN1-207ENST00000497742 RIMBP3CA6NJZ7 1639 aa18.04■□□□□ 0.48
NICN1-207ENST00000497742 RIMBP3BA6NNM3 1639 aa18.04■□□□□ 0.48
NICN1-207ENST00000497742 RIMBP3Q9UFD9 1639 aa18.04■□□□□ 0.48
NICN1-207ENST00000497742 JPH4Q96JJ6 628 aa18.03■□□□□ 0.48
NICN1-207ENST00000497742 IQGAP2Q13576 1575 aa18.01■□□□□ 0.47
NICN1-207ENST00000497742 PRG4Q92954 1404 aaPredicted RBP17.98■□□□□ 0.47
NICN1-207ENST00000497742 CTTNBP2Q8WZ74 1663 aa17.98■□□□□ 0.47
NICN1-207ENST00000497742 ERCC6L2Q5T890 1561 aa17.97■□□□□ 0.47
NICN1-207ENST00000497742 GOLGA3Q08378 1498 aa17.95■□□□□ 0.46
NICN1-207ENST00000497742 ARAP1Q96P48 1450 aa17.95■□□□□ 0.46
NICN1-207ENST00000497742 UGGT2Q9NYU1 1516 aa17.93■□□□□ 0.46
NICN1-207ENST00000497742 DISP1Q96F81 1524 aa17.88■□□□□ 0.45
NICN1-207ENST00000497742 CARMIL2Q6F5E8 1435 aa17.88■□□□□ 0.45
NICN1-207ENST00000497742 CYB5RLQ6IPT4 315 aa17.87■□□□□ 0.45
NICN1-207ENST00000497742 EHMT2Q96KQ7 1210 aa17.86■□□□□ 0.45
NICN1-207ENST00000497742 UBTFP17480 764 aaKnown RBP17.86■□□□□ 0.45
NICN1-207ENST00000497742 KIAA0556O60303 1618 aa17.84■□□□□ 0.45
NICN1-207ENST00000497742 TNIKQ9UKE5 1360 aa17.82■□□□□ 0.44
NICN1-207ENST00000497742 PTPRGP23470 1445 aa17.79■□□□□ 0.44
NICN1-207ENST00000497742 SAMD9Q5K651 1589 aa17.79■□□□□ 0.44
NICN1-207ENST00000497742 EFCAB5A4FU69 1503 aa17.74■□□□□ 0.43
NICN1-207ENST00000497742 RANGAP1P46060 587 aaPredicted RBP17.73■□□□□ 0.43
NICN1-207ENST00000497742 TTBK1Q5TCY1 1321 aaPredicted RBP17.71■□□□□ 0.43
NICN1-207ENST00000497742 P3H3Q8IVL6 736 aa17.71■□□□□ 0.43
NICN1-207ENST00000497742 LOC105371045A0A1W2PR82 267 aa17.69■□□□□ 0.42
NICN1-207ENST00000497742 ARHGAP35Q9NRY4 1499 aa17.69■□□□□ 0.42
NICN1-207ENST00000497742 FHOD3Q2V2M9 1422 aa17.68■□□□□ 0.42
NICN1-207ENST00000497742 UACAQ9BZF9 1416 aa17.68■□□□□ 0.42
NICN1-207ENST00000497742 ADCY10Q96PN6 1610 aa17.68■□□□□ 0.42
NICN1-207ENST00000497742 UHRF1BP1LA0JNW5 1464 aa17.67■□□□□ 0.42
NICN1-207ENST00000497742 ABCC2Q92887 1545 aa17.65■□□□□ 0.42
NICN1-207ENST00000497742 PLB1Q6P1J6 1458 aa17.65■□□□□ 0.42
NICN1-207ENST00000497742 ABCA8O94911 1581 aa17.64■□□□□ 0.41
NICN1-207ENST00000497742 CLIP1P30622 1438 aa17.63■□□□□ 0.41
NICN1-207ENST00000497742 CEP162Q5TB80 1403 aa17.6■□□□□ 0.41
NICN1-207ENST00000497742 NPM1P06748 294 aaKnown RBP eCLIP17.58■□□□□ 0.41
NICN1-207ENST00000497742 KDM5BQ9UGL1 1544 aa17.58■□□□□ 0.4
NICN1-207ENST00000497742 FMN1Q68DA7 1419 aa17.58■□□□□ 0.4
NICN1-207ENST00000497742 RAPGEF6Q8TEU7 1601 aa17.57■□□□□ 0.4
NICN1-207ENST00000497742 MAPKBP1O60336 1514 aa17.55■□□□□ 0.4
NICN1-207ENST00000497742 ZCCHC11Q5TAX3 1644 aaKnown RBP17.52■□□□□ 0.4
NICN1-207ENST00000497742 NUP153P49790 1475 aaKnown RBP17.52■□□□□ 0.4
NICN1-207ENST00000497742 ATP10BO94823 1461 aa17.49■□□□□ 0.39
NICN1-207ENST00000497742 ASXL2Q76L83 1435 aa17.48■□□□□ 0.39
NICN1-207ENST00000497742 CASKIN1Q8WXD9 1431 aa17.46■□□□□ 0.39
NICN1-207ENST00000497742 ARID3CA6NKF2 412 aa17.46■□□□□ 0.39
NICN1-207ENST00000497742 HECW1Q76N89 1606 aa17.46■□□□□ 0.38
NICN1-207ENST00000497742 PCF11O94913 1555 aaKnown RBP17.45■□□□□ 0.38
NICN1-207ENST00000497742 ABCC10Q5T3U5 1492 aa17.44■□□□□ 0.38
NICN1-207ENST00000497742 FYCO1Q9BQS8 1478 aa17.44■□□□□ 0.38
NICN1-207ENST00000497742 TRHP20396 242 aaPredicted RBP17.43■□□□□ 0.38
NICN1-207ENST00000497742 WDR7Q9Y4E6 1490 aa17.42■□□□□ 0.38
NICN1-207ENST00000497742 EPRSP07814 1512 aaKnown RBP17.42■□□□□ 0.38
NICN1-207ENST00000497742 DIP2BQ9P265 1576 aa17.41■□□□□ 0.38
NICN1-207ENST00000497742 ATP1B4Q9UN42 357 aaPredicted RBP17.41■□□□□ 0.38
NICN1-207ENST00000497742 CDK13Q14004 1512 aaKnown RBP17.4■□□□□ 0.38
NICN1-207ENST00000497742 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.39■□□□□ 0.37
NICN1-207ENST00000497742 HNRNPUL2Q1KMD3 747 aaKnown RBP17.39■□□□□ 0.37
NICN1-207ENST00000497742 VPS8Q8N3P4 1428 aa17.39■□□□□ 0.37
NICN1-207ENST00000497742 KIF13AQ9H1H9 1805 aa17.38■□□□□ 0.37
NICN1-207ENST00000497742 CCDC18Q5T9S5 1454 aa17.37■□□□□ 0.37
NICN1-207ENST00000497742 FAM69CQ0P6D2 419 aa17.37■□□□□ 0.37
NICN1-207ENST00000497742 LRRIQ1Q96JM4 1722 aa17.37■□□□□ 0.37
NICN1-207ENST00000497742 GLI2P10070 1586 aa17.36■□□□□ 0.37
NICN1-207ENST00000497742 PLEKHD1A6NEE1 506 aa17.35■□□□□ 0.37
NICN1-207ENST00000497742 KCNH8Q96L42 1107 aa17.32■□□□□ 0.36
NICN1-207ENST00000497742 CDK11AQ9UQ88 783 aaPredicted RBP17.32■□□□□ 0.36
NICN1-207ENST00000497742 TROQ12816 1431 aaPredicted RBP17.29■□□□□ 0.36
NICN1-207ENST00000497742 MAP3K4Q9Y6R4 1608 aa17.28■□□□□ 0.36
NICN1-207ENST00000497742 MAGI3Q5TCQ9 1506 aa17.26■□□□□ 0.35
NICN1-207ENST00000497742 ABCA9Q8IUA7 1624 aa17.26■□□□□ 0.35
NICN1-207ENST00000497742 CFAP43Q8NDM7 1665 aa17.25■□□□□ 0.35
NICN1-207ENST00000497742 CD109Q6YHK3 1445 aa17.24■□□□□ 0.35
NICN1-207ENST00000497742 MAP3K1Q13233 1512 aa17.22■□□□□ 0.35
NICN1-207ENST00000497742 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.22■□□□□ 0.35
NICN1-207ENST00000497742 TIAM1Q13009 1591 aa17.22■□□□□ 0.35
NICN1-207ENST00000497742 PPRC1Q5VV67 1664 aaKnown RBP17.22■□□□□ 0.35
NICN1-207ENST00000497742 TSPOAP1O95153 1857 aa17.21■□□□□ 0.35
NICN1-207ENST00000497742 KIF14Q15058 1648 aa17.21■□□□□ 0.35
NICN1-207ENST00000497742 TTC37Q6PGP7 1564 aa17.2■□□□□ 0.34
NICN1-207ENST00000497742 MTUS2Q5JR59 1369 aa17.2■□□□□ 0.34
NICN1-207ENST00000497742 TEX14Q8IWB6 1497 aa17.19■□□□□ 0.34
NICN1-207ENST00000497742 EHBP1L1Q8N3D4 1523 aa17.19■□□□□ 0.34
NICN1-207ENST00000497742 LRRC9Q6ZRR7 1453 aa17.15■□□□□ 0.34
NICN1-207ENST00000497742 APLP2Q06481 763 aa17.14■□□□□ 0.33
NICN1-207ENST00000497742 PLCH2O75038 1416 aa17.14■□□□□ 0.33
NICN1-207ENST00000497742 ARAP3Q8WWN8 1544 aa17.12■□□□□ 0.33
NICN1-207ENST00000497742 KANK4Q5T7N3 995 aaPredicted RBP17.12■□□□□ 0.33
NICN1-207ENST00000497742 MYO5CQ9NQX4 1742 aa17.11■□□□□ 0.33
NICN1-207ENST00000497742 NEO1Q92859 1461 aa17.1■□□□□ 0.33
NICN1-207ENST00000497742 PHLDB1Q86UU1 1377 aa17.1■□□□□ 0.33
NICN1-207ENST00000497742 FANCAO15360 1455 aa17.09■□□□□ 0.33
NICN1-207ENST00000497742 SUPT6HQ7KZ85 1726 aaKnown RBP17.08■□□□□ 0.33
NICN1-207ENST00000497742 NCOA2Q15596 1464 aa17.08■□□□□ 0.32
NICN1-207ENST00000497742 GPATCH8Q9UKJ3 1502 aaKnown RBP17.07■□□□□ 0.32
NICN1-207ENST00000497742 PREX2Q70Z35 1606 aa17.07■□□□□ 0.32
NICN1-207ENST00000497742 KDM6BO15054 1643 aa17.07■□□□□ 0.32
NICN1-207ENST00000497742 CCNB3Q8WWL7 1395 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms