RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 IQGAP2Q13576 1575 aa19.17■□□□□ 0.66
HPS1-213ENST00000497527 VPS8Q8N3P4 1428 aa19.17■□□□□ 0.66
HPS1-213ENST00000497527 ARHGAP35Q9NRY4 1499 aa19.16■□□□□ 0.66
HPS1-213ENST00000497527 CHMP7Q8WUX9 453 aaPredicted RBP19.15■□□□□ 0.66
HPS1-213ENST00000497527 ARAP1Q96P48 1450 aa19.13■□□□□ 0.65
HPS1-213ENST00000497527 KIAA0586Q9BVV6 1533 aa19.12■□□□□ 0.65
HPS1-213ENST00000497527 RANGAP1P46060 587 aaPredicted RBP19.12■□□□□ 0.65
HPS1-213ENST00000497527 SAMD9Q5K651 1589 aa19.11■□□□□ 0.65
HPS1-213ENST00000497527 CHD1O14646 1710 aa19.11■□□□□ 0.65
HPS1-213ENST00000497527 NUP160Q12769 1436 aa19.08■□□□□ 0.65
HPS1-213ENST00000497527 CEP170Q5SW79 1584 aa19.07■□□□□ 0.64
HPS1-213ENST00000497527 UGGT2Q9NYU1 1516 aa19.06■□□□□ 0.64
HPS1-213ENST00000497527 FBLN2P98095 1184 aa19.05■□□□□ 0.64
HPS1-213ENST00000497527 APLP2Q06481 763 aa19.02■□□□□ 0.64
HPS1-213ENST00000497527 FMN1Q68DA7 1419 aa19.01■□□□□ 0.63
HPS1-213ENST00000497527 FHOD3Q2V2M9 1422 aa18.98■□□□□ 0.63
HPS1-213ENST00000497527 KIAA0556O60303 1618 aa18.96■□□□□ 0.63
HPS1-213ENST00000497527 FYCO1Q9BQS8 1478 aa18.94■□□□□ 0.62
HPS1-213ENST00000497527 MAP3K1Q13233 1512 aa18.93■□□□□ 0.62
HPS1-213ENST00000497527 PCF11O94913 1555 aaKnown RBP18.93■□□□□ 0.62
HPS1-213ENST00000497527 CARMIL2Q6F5E8 1435 aa18.92■□□□□ 0.62
HPS1-213ENST00000497527 CASKIN1Q8WXD9 1431 aa18.91■□□□□ 0.62
HPS1-213ENST00000497527 P3H3Q8IVL6 736 aa18.91■□□□□ 0.62
HPS1-213ENST00000497527 DISP1Q96F81 1524 aa18.9■□□□□ 0.62
HPS1-213ENST00000497527 CFAP43Q8NDM7 1665 aa18.89■□□□□ 0.61
HPS1-213ENST00000497527 TRIM26Q12899 539 aaPredicted RBP18.89■□□□□ 0.61
HPS1-213ENST00000497527 SHROOM2Q13796 1616 aa18.89■□□□□ 0.61
HPS1-213ENST00000497527 JPH4Q96JJ6 628 aa18.87■□□□□ 0.61
HPS1-213ENST00000497527 TIAM1Q13009 1591 aa18.86■□□□□ 0.61
HPS1-213ENST00000497527 HECW1Q76N89 1606 aa18.85■□□□□ 0.61
HPS1-213ENST00000497527 CLASP1Q7Z460 1538 aa18.85■□□□□ 0.61
HPS1-213ENST00000497527 CCDC18Q5T9S5 1454 aa18.81■□□□□ 0.6
HPS1-213ENST00000497527 RAPGEF6Q8TEU7 1601 aa18.78■□□□□ 0.6
HPS1-213ENST00000497527 PRG4Q92954 1404 aaPredicted RBP18.78■□□□□ 0.6
HPS1-213ENST00000497527 PPARGC1BQ86YN6 1023 aaKnown RBP18.77■□□□□ 0.6
HPS1-213ENST00000497527 LRRIQ1Q96JM4 1722 aa18.76■□□□□ 0.59
HPS1-213ENST00000497527 ATP1B4Q9UN42 357 aaPredicted RBP18.75■□□□□ 0.59
HPS1-213ENST00000497527 LRRC9Q6ZRR7 1453 aa18.74■□□□□ 0.59
HPS1-213ENST00000497527 PCGF6Q9BYE7 350 aa18.73■□□□□ 0.59
HPS1-213ENST00000497527 EPRSP07814 1512 aaKnown RBP18.69■□□□□ 0.58
HPS1-213ENST00000497527 EHBP1L1Q8N3D4 1523 aa18.69■□□□□ 0.58
HPS1-213ENST00000497527 ABCA8O94911 1581 aa18.68■□□□□ 0.58
HPS1-213ENST00000497527 OSCARQ8IYS5 282 aa18.68■□□□□ 0.58
HPS1-213ENST00000497527 PTPRGP23470 1445 aa18.67■□□□□ 0.58
HPS1-213ENST00000497527 KANK4Q5T7N3 995 aaPredicted RBP18.67■□□□□ 0.58
HPS1-213ENST00000497527 TTBK1Q5TCY1 1321 aaPredicted RBP18.67■□□□□ 0.58
HPS1-213ENST00000497527 NUP153P49790 1475 aaKnown RBP18.65■□□□□ 0.58
HPS1-213ENST00000497527 SUPT6HQ7KZ85 1726 aaKnown RBP18.65■□□□□ 0.58
HPS1-213ENST00000497527 MTUS2Q5JR59 1369 aa18.64■□□□□ 0.57
HPS1-213ENST00000497527 PLB1Q6P1J6 1458 aa18.63■□□□□ 0.57
HPS1-213ENST00000497527 CDK11AQ9UQ88 783 aaPredicted RBP18.61■□□□□ 0.57
HPS1-213ENST00000497527 ERCC6L2Q5T890 1561 aa18.6■□□□□ 0.57
HPS1-213ENST00000497527 CDK13Q14004 1512 aaKnown RBP18.59■□□□□ 0.57
HPS1-213ENST00000497527 UACAQ9BZF9 1416 aa18.58■□□□□ 0.57
HPS1-213ENST00000497527 RRBP1Q9P2E9 1410 aaKnown RBP18.57■□□□□ 0.56
HPS1-213ENST00000497527 ABCC2Q92887 1545 aa18.56■□□□□ 0.56
HPS1-213ENST00000497527 UHRF1BP1LA0JNW5 1464 aa18.54■□□□□ 0.56
HPS1-213ENST00000497527 MAGI3Q5TCQ9 1506 aa18.54■□□□□ 0.56
HPS1-213ENST00000497527 ADCY10Q96PN6 1610 aa18.52■□□□□ 0.56
HPS1-213ENST00000497527 NCOA2Q15596 1464 aa18.52■□□□□ 0.56
HPS1-213ENST00000497527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.52■□□□□ 0.56
HPS1-213ENST00000497527 HNRNPUL2Q1KMD3 747 aaKnown RBP18.52■□□□□ 0.56
HPS1-213ENST00000497527 ARHGEF11O15085 1522 aa18.51■□□□□ 0.55
HPS1-213ENST00000497527 TROQ12816 1431 aaPredicted RBP18.5■□□□□ 0.55
HPS1-213ENST00000497527 CCNB3Q8WWL7 1395 aa18.5■□□□□ 0.55
HPS1-213ENST00000497527 ATP10BO94823 1461 aa18.5■□□□□ 0.55
HPS1-213ENST00000497527 PHLDB1Q86UU1 1377 aa18.48■□□□□ 0.55
HPS1-213ENST00000497527 MYOM3Q5VTT5 1437 aa18.47■□□□□ 0.55
HPS1-213ENST00000497527 ITSN2Q9NZM3 1697 aa18.47■□□□□ 0.55
HPS1-213ENST00000497527 KIF14Q15058 1648 aa18.46■□□□□ 0.55
HPS1-213ENST00000497527 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.46■□□□□ 0.55
HPS1-213ENST00000497527 PLEKHD1A6NEE1 506 aa18.45■□□□□ 0.54
HPS1-213ENST00000497527 ARID3CA6NKF2 412 aa18.45■□□□□ 0.54
HPS1-213ENST00000497527 ZCCHC11Q5TAX3 1644 aaKnown RBP18.44■□□□□ 0.54
HPS1-213ENST00000497527 KDM5BQ9UGL1 1544 aa18.44■□□□□ 0.54
HPS1-213ENST00000497527 FGD6Q6ZV73 1430 aa18.43■□□□□ 0.54
HPS1-213ENST00000497527 MIA2Q96PC5 1412 aa18.41■□□□□ 0.54
HPS1-213ENST00000497527 PTPN23Q9H3S7 1636 aa18.39■□□□□ 0.53
HPS1-213ENST00000497527 TCOF1Q13428 1488 aaKnown RBP18.35■□□□□ 0.53
HPS1-213ENST00000497527 FAM50AQ14320 339 aaKnown RBP18.34■□□□□ 0.53
HPS1-213ENST00000497527 CDC42BPAQ5VT25 1732 aa18.34■□□□□ 0.53
HPS1-213ENST00000497527 ABCC10Q5T3U5 1492 aa18.33■□□□□ 0.52
HPS1-213ENST00000497527 RIMBP3CA6NJZ7 1639 aa18.32■□□□□ 0.52
HPS1-213ENST00000497527 RIMBP3BA6NNM3 1639 aa18.32■□□□□ 0.52
HPS1-213ENST00000497527 RIMBP3Q9UFD9 1639 aa18.32■□□□□ 0.52
HPS1-213ENST00000497527 MYO5CQ9NQX4 1742 aa18.3■□□□□ 0.52
HPS1-213ENST00000497527 GPATCH8Q9UKJ3 1502 aaKnown RBP18.29■□□□□ 0.52
HPS1-213ENST00000497527 PREX2Q70Z35 1606 aa18.29■□□□□ 0.52
HPS1-213ENST00000497527 NPM1P06748 294 aaKnown RBP eCLIP18.28■□□□□ 0.52
HPS1-213ENST00000497527 DNAJC5Q9H3Z4 198 aa18.28■□□□□ 0.52
HPS1-213ENST00000497527 WDR7Q9Y4E6 1490 aa18.26■□□□□ 0.51
HPS1-213ENST00000497527 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.24■□□□□ 0.51
HPS1-213ENST00000497527 DNMT1P26358 1616 aaKnown RBP18.24■□□□□ 0.51
HPS1-213ENST00000497527 CDC42BPBQ9Y5S2 1711 aa18.24■□□□□ 0.51
HPS1-213ENST00000497527 CFDP1Q9UEE9 299 aaPredicted RBP18.24■□□□□ 0.51
HPS1-213ENST00000497527 TTC37Q6PGP7 1564 aa18.23■□□□□ 0.51
HPS1-213ENST00000497527 CAMSAP2Q08AD1 1489 aa18.22■□□□□ 0.51
HPS1-213ENST00000497527 ITGAEP38570 1179 aa18.22■□□□□ 0.51
HPS1-213ENST00000497527 ARAP3Q8WWN8 1544 aa18.2■□□□□ 0.5
HPS1-213ENST00000497527 ABCA9Q8IUA7 1624 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms