RNA–Protein interactions for RNA: ENST00000497382.5

VIT-208, Transcript of vitrin, humanhuman

TSL 1 (best) BASIC

Gene VIT, Length 2,650 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-208ENST00000497382 RIMBP3BA6NNM3 1639 aa14.14□□□□□ -0.15
VIT-208ENST00000497382 RIMBP3Q9UFD9 1639 aa14.14□□□□□ -0.15
VIT-208ENST00000497382 SALL2Q9Y467 1007 aaPredicted RBP14.13□□□□□ -0.15
VIT-208ENST00000497382 MROH2BQ7Z745 1585 aa14.12□□□□□ -0.15
VIT-208ENST00000497382 CCDC136Q96JN2 1154 aa14.09□□□□□ -0.15
VIT-208ENST00000497382 FANCD2Q9BXW9 1451 aa14.08□□□□□ -0.16
VIT-208ENST00000497382 TMEM132AQ24JP5 1023 aa14.05□□□□□ -0.16
VIT-208ENST00000497382 ZEB1P37275 1124 aaPredicted RBP14.04□□□□□ -0.16
VIT-208ENST00000497382 ARHGEF11O15085 1522 aa14.04□□□□□ -0.16
VIT-208ENST00000497382 A0A0U1RQG5 324 aaPredicted RBP14.03□□□□□ -0.16
VIT-208ENST00000497382 CNKSR2Q8WXI2 1034 aa14.03□□□□□ -0.16
VIT-208ENST00000497382 CFTRP13569 1480 aa14.02□□□□□ -0.17
VIT-208ENST00000497382 AAMPQ13685 434 aa13.98□□□□□ -0.17
VIT-208ENST00000497382 URB2Q14146 1524 aaKnown RBP13.98□□□□□ -0.17
VIT-208ENST00000497382 CDK11BP21127 795 aaKnown RBP13.96□□□□□ -0.17
VIT-208ENST00000497382 CDK11AQ9UQ88 783 aaPredicted RBP13.96□□□□□ -0.17
VIT-208ENST00000497382 MYT1LQ9UL68 1186 aa13.95□□□□□ -0.18
VIT-208ENST00000497382 IFT140Q96RY7 1462 aa13.94□□□□□ -0.18
VIT-208ENST00000497382 PRDM2Q13029 1718 aa13.94□□□□□ -0.18
VIT-208ENST00000497382 SUPT5HO00267 1087 aaKnown RBP13.93□□□□□ -0.18
VIT-208ENST00000497382 PLCB2Q00722 1185 aa13.93□□□□□ -0.18
VIT-208ENST00000497382 WIZO95785 1651 aa13.92□□□□□ -0.18
VIT-208ENST00000497382 PAXIP1Q6ZW49 1069 aaPredicted RBP13.91□□□□□ -0.18
VIT-208ENST00000497382 UBTFP17480 764 aaKnown RBP13.9□□□□□ -0.18
VIT-208ENST00000497382 RSF1Q96T23 1441 aaPredicted RBP13.89□□□□□ -0.19
VIT-208ENST00000497382 CLSPNQ9HAW4 1339 aa13.88□□□□□ -0.19
VIT-208ENST00000497382 RSPH4AQ5TD94 716 aa13.87□□□□□ -0.19
VIT-208ENST00000497382 RSPH6AQ9H0K4 717 aa13.85□□□□□ -0.19
VIT-208ENST00000497382 ARAP1Q96P48 1450 aa13.85□□□□□ -0.19
VIT-208ENST00000497382 ABCC8Q09428 1581 aa13.83□□□□□ -0.2
VIT-208ENST00000497382 GLIPR1L2Q4G1C9 344 aa13.83□□□□□ -0.2
VIT-208ENST00000497382 RBM10P98175 930 aaKnown RBP13.83□□□□□ -0.2
VIT-208ENST00000497382 ZNF608Q9ULD9 1512 aaPredicted RBP13.82□□□□□ -0.2
VIT-208ENST00000497382 TRHP20396 242 aaPredicted RBP13.82□□□□□ -0.2
VIT-208ENST00000497382 CYB5RLQ6IPT4 315 aa13.82□□□□□ -0.2
VIT-208ENST00000497382 TOP2AP11388 1531 aaKnown RBP13.82□□□□□ -0.2
VIT-208ENST00000497382 PCGF6Q9BYE7 350 aa13.82□□□□□ -0.2
VIT-208ENST00000497382 EIF4G3O43432 1585 aaKnown RBP13.82□□□□□ -0.2
VIT-208ENST00000497382 PPP6R1Q9UPN7 881 aa13.81□□□□□ -0.2
VIT-208ENST00000497382 CHD1O14646 1710 aa13.8□□□□□ -0.2
VIT-208ENST00000497382 HSP90B1P14625 803 aaKnown RBP13.77□□□□□ -0.2
VIT-208ENST00000497382 IGSF3O75054 1194 aa13.77□□□□□ -0.21
VIT-208ENST00000497382 IRX6P78412 446 aaPredicted RBP13.77□□□□□ -0.21
VIT-208ENST00000497382 ZNF326Q5BKZ1 582 aaKnown RBP13.77□□□□□ -0.21
VIT-208ENST00000497382 TOPBP1Q92547 1522 aa13.77□□□□□ -0.21
VIT-208ENST00000497382 DEKP35659 375 aaKnown RBP13.75□□□□□ -0.21
VIT-208ENST00000497382 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.75□□□□□ -0.21
VIT-208ENST00000497382 NAP1L5Q96NT1 182 aaPredicted RBP13.75□□□□□ -0.21
VIT-208ENST00000497382 ZMYND15Q9H091 742 aa13.74□□□□□ -0.21
VIT-208ENST00000497382 DNMBPQ6XZF7 1577 aa13.73□□□□□ -0.21
VIT-208ENST00000497382 WDR97A6NE52 1622 aa13.71□□□□□ -0.21
VIT-208ENST00000497382 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.71□□□□□ -0.22
VIT-208ENST00000497382 TARBP1Q13395 1621 aaKnown RBP13.71□□□□□ -0.22
VIT-208ENST00000497382 TSHZ2Q9NRE2 1034 aa13.69□□□□□ -0.22
VIT-208ENST00000497382 CLASP1Q7Z460 1538 aa13.68□□□□□ -0.22
VIT-208ENST00000497382 CFAP44Q96MT7 982 aa13.67□□□□□ -0.22
VIT-208ENST00000497382 BCCIPQ9P287 314 aaKnown RBP eCLIP13.67□□□□□ -0.22
VIT-208ENST00000497382 POLR3GLQ9BT43 218 aa13.66□□□□□ -0.22
VIT-208ENST00000497382 SYNJ1O43426 1573 aa13.64□□□□□ -0.23
VIT-208ENST00000497382 AQRO60306 1485 aaKnown RBP eCLIP13.63□□□□□ -0.23
VIT-208ENST00000497382 MAGI1Q96QZ7 1491 aaPredicted RBP13.58□□□□□ -0.23
VIT-208ENST00000497382 CCDC88BA6NC98 1476 aa13.58□□□□□ -0.24
VIT-208ENST00000497382 POLA1P09884 1462 aaPredicted RBP13.58□□□□□ -0.24
VIT-208ENST00000497382 FBLN2P98095 1184 aa13.56□□□□□ -0.24
VIT-208ENST00000497382 SNAPC4Q5SXM2 1469 aa13.54□□□□□ -0.24
VIT-208ENST00000497382 VSIG10Q8N0Z9 540 aa13.53□□□□□ -0.24
VIT-208ENST00000497382 SYNJ2O15056 1496 aa13.51□□□□□ -0.25
VIT-208ENST00000497382 GAPVD1Q14C86 1478 aa13.51□□□□□ -0.25
VIT-208ENST00000497382 CCDC9Q9Y3X0 531 aaKnown RBP13.5□□□□□ -0.25
VIT-208ENST00000497382 SOGA1O94964 1423 aa13.49□□□□□ -0.25
VIT-208ENST00000497382 GRIN2BQ13224 1484 aa13.49□□□□□ -0.25
VIT-208ENST00000497382 NAP1L2Q9ULW6 460 aaPredicted RBP13.48□□□□□ -0.25
VIT-208ENST00000497382 CHMP7Q8WUX9 453 aaPredicted RBP13.47□□□□□ -0.25
VIT-208ENST00000497382 BRPF3Q9ULD4 1205 aa13.47□□□□□ -0.25
VIT-208ENST00000497382 RAD54L2Q9Y4B4 1467 aa13.45□□□□□ -0.26
VIT-208ENST00000497382 HMGB1P09429 215 aaKnown RBP13.45□□□□□ -0.26
VIT-208ENST00000497382 TDRD9Q8NDG6 1382 aaKnown RBP13.44□□□□□ -0.26
VIT-208ENST00000497382 KDM2AQ9Y2K7 1162 aa13.42□□□□□ -0.26
VIT-208ENST00000497382 PBRM1Q86U86 1689 aa13.41□□□□□ -0.26
VIT-208ENST00000497382 FGD5Q6ZNL6 1462 aa13.41□□□□□ -0.26
VIT-208ENST00000497382 ZFP91Q96JP5 570 aaPredicted RBP13.41□□□□□ -0.26
VIT-208ENST00000497382 KIF13AQ9H1H9 1805 aa13.38□□□□□ -0.27
VIT-208ENST00000497382 PUS7Q96PZ0 661 aaKnown RBP13.36□□□□□ -0.27
VIT-208ENST00000497382 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.36□□□□□ -0.27
VIT-208ENST00000497382 PRDM10Q9NQV6 1147 aa13.35□□□□□ -0.27
VIT-208ENST00000497382 TICAM2Q86XR7 235 aa13.34□□□□□ -0.27
VIT-208ENST00000497382 CNPY4Q8N129 248 aa13.34□□□□□ -0.27
VIT-208ENST00000497382 SHROOM2Q13796 1616 aa13.34□□□□□ -0.27
VIT-208ENST00000497382 CHMP4BQ9H444 224 aaKnown RBP13.34□□□□□ -0.27
VIT-208ENST00000497382 ABCA5Q8WWZ7 1642 aa13.33□□□□□ -0.28
VIT-208ENST00000497382 ZNF592Q92610 1267 aa13.33□□□□□ -0.28
VIT-208ENST00000497382 CEP170Q5SW79 1584 aa13.32□□□□□ -0.28
VIT-208ENST00000497382 CUX1P39880 1505 aa13.32□□□□□ -0.28
VIT-208ENST00000497382 NCLP19338 710 aaKnown RBP13.31□□□□□ -0.28
VIT-208ENST00000497382 TMED8Q6PL24 325 aaPredicted RBP13.31□□□□□ -0.28
VIT-208ENST00000497382 NUP160Q12769 1436 aa13.31□□□□□ -0.28
VIT-208ENST00000497382 ABCA10Q8WWZ4 1543 aa13.3□□□□□ -0.28
VIT-208ENST00000497382 GRIN2AQ12879 1464 aa13.3□□□□□ -0.28
VIT-208ENST00000497382 IPO4Q8TEX9 1081 aaKnown RBP13.3□□□□□ -0.28
VIT-208ENST00000497382 TEX2Q8IWB9 1127 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms