RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 TARBP1Q13395 1621 aaKnown RBP13.14□□□□□ -0.31
CHCHD3-206ENST00000496427 POLA2Q14181 598 aa13.07□□□□□ -0.32
CHCHD3-206ENST00000496427 AQRO60306 1485 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHCHD3-206ENST00000496427 ABCC8Q09428 1581 aa13.07□□□□□ -0.32
CHCHD3-206ENST00000496427 ARAP1Q96P48 1450 aa13.06□□□□□ -0.32
CHCHD3-206ENST00000496427 POLA1P09884 1462 aaPredicted RBP13.04□□□□□ -0.32
CHCHD3-206ENST00000496427 CYB5RLQ6IPT4 315 aa13.02□□□□□ -0.33
CHCHD3-206ENST00000496427 RAD54L2Q9Y4B4 1467 aa13.01□□□□□ -0.33
CHCHD3-206ENST00000496427 PBRM1Q86U86 1689 aa12.99□□□□□ -0.33
CHCHD3-206ENST00000496427 WDR97A6NE52 1622 aa12.99□□□□□ -0.33
CHCHD3-206ENST00000496427 FBLN2P98095 1184 aa12.98□□□□□ -0.33
CHCHD3-206ENST00000496427 CHRDL2Q6WN34 429 aa12.97□□□□□ -0.33
CHCHD3-206ENST00000496427 CLASP1Q7Z460 1538 aa12.97□□□□□ -0.33
CHCHD3-206ENST00000496427 SNAPC4Q5SXM2 1469 aa12.97□□□□□ -0.33
CHCHD3-206ENST00000496427 FGD5Q6ZNL6 1462 aa12.95□□□□□ -0.34
CHCHD3-206ENST00000496427 TDRD9Q8NDG6 1382 aaKnown RBP12.94□□□□□ -0.34
CHCHD3-206ENST00000496427 SYNJ1O43426 1573 aa12.93□□□□□ -0.34
CHCHD3-206ENST00000496427 CUX1P39880 1505 aa12.93□□□□□ -0.34
CHCHD3-206ENST00000496427 SOGA1O94964 1423 aa12.92□□□□□ -0.34
CHCHD3-206ENST00000496427 ZBTB12Q9Y330 459 aaPredicted RBP12.91□□□□□ -0.34
CHCHD3-206ENST00000496427 FOXD4L1Q9NU39 408 aa12.89□□□□□ -0.35
CHCHD3-206ENST00000496427 MAGI1Q96QZ7 1491 aaPredicted RBP12.87□□□□□ -0.35
CHCHD3-206ENST00000496427 SLC4A1APQ9BWU0 796 aaKnown RBP12.87□□□□□ -0.35
CHCHD3-206ENST00000496427 GRIN2BQ13224 1484 aa12.85□□□□□ -0.35
CHCHD3-206ENST00000496427 AKT1S1Q96B36 256 aa12.85□□□□□ -0.35
CHCHD3-206ENST00000496427 ABCA5Q8WWZ7 1642 aa12.84□□□□□ -0.35
CHCHD3-206ENST00000496427 SYNJ2O15056 1496 aa12.84□□□□□ -0.35
CHCHD3-206ENST00000496427 CHMP7Q8WUX9 453 aaPredicted RBP12.82□□□□□ -0.36
CHCHD3-206ENST00000496427 ERCC6L2Q5T890 1561 aa12.81□□□□□ -0.36
CHCHD3-206ENST00000496427 GAPVD1Q14C86 1478 aa12.78□□□□□ -0.36
CHCHD3-206ENST00000496427 ATF5Q9Y2D1 282 aaPredicted RBP12.76□□□□□ -0.37
CHCHD3-206ENST00000496427 ABCA10Q8WWZ4 1543 aa12.76□□□□□ -0.37
CHCHD3-206ENST00000496427 ADAMTS12P58397 1594 aa12.76□□□□□ -0.37
CHCHD3-206ENST00000496427 CEP170Q5SW79 1584 aa12.75□□□□□ -0.37
CHCHD3-206ENST00000496427 KIF13AQ9H1H9 1805 aa12.74□□□□□ -0.37
CHCHD3-206ENST00000496427 BIVM-ERCC5R4GMW8 1640 aa12.73□□□□□ -0.37
CHCHD3-206ENST00000496427 GRIN2AQ12879 1464 aa12.72□□□□□ -0.37
CHCHD3-206ENST00000496427 SHROOM2Q13796 1616 aa12.71□□□□□ -0.37
CHCHD3-206ENST00000496427 TOP2BQ02880 1626 aa12.67□□□□□ -0.38
CHCHD3-206ENST00000496427 REM2Q8IYK8 340 aaPredicted RBP12.66□□□□□ -0.38
CHCHD3-206ENST00000496427 NUP160Q12769 1436 aa12.65□□□□□ -0.38
CHCHD3-206ENST00000496427 SP7Q8TDD2 431 aaPredicted RBP12.63□□□□□ -0.39
CHCHD3-206ENST00000496427 WRNQ14191 1432 aaPredicted RBP eCLIP12.62□□□□□ -0.39
CHCHD3-206ENST00000496427 ERICH3Q5RHP9 1530 aa12.6□□□□□ -0.39
CHCHD3-206ENST00000496427 RUSC2Q8N2Y8 1516 aa12.6□□□□□ -0.39
CHCHD3-206ENST00000496427 FHAD1B1AJZ9 1412 aa12.6□□□□□ -0.39
CHCHD3-206ENST00000496427 SUPT5HO00267 1087 aaKnown RBP12.59□□□□□ -0.39
CHCHD3-206ENST00000496427 ATXN8OSP0DMR3 200 aa12.58□□□□□ -0.4
CHCHD3-206ENST00000496427 PIP4P2Q8N4L2 257 aa12.57□□□□□ -0.4
CHCHD3-206ENST00000496427 TSPOAP1O95153 1857 aa12.57□□□□□ -0.4
CHCHD3-206ENST00000496427 PRG4Q92954 1404 aaPredicted RBP12.54□□□□□ -0.4
CHCHD3-206ENST00000496427 ADCY10Q96PN6 1610 aa12.53□□□□□ -0.4
CHCHD3-206ENST00000496427 DIP2BQ9P265 1576 aa12.52□□□□□ -0.4
CHCHD3-206ENST00000496427 PITPNM1O00562 1244 aa12.51□□□□□ -0.41
CHCHD3-206ENST00000496427 FXR2P51116 673 aaKnown RBP eCLIP12.5□□□□□ -0.41
CHCHD3-206ENST00000496427 ZBTB22O15209 634 aa12.48□□□□□ -0.41
CHCHD3-206ENST00000496427 MAPKBP1O60336 1514 aa12.47□□□□□ -0.41
CHCHD3-206ENST00000496427 KDM6BO15054 1643 aa12.47□□□□□ -0.41
CHCHD3-206ENST00000496427 ABCC10Q5T3U5 1492 aa12.46□□□□□ -0.41
CHCHD3-206ENST00000496427 CUL7Q14999 1698 aa12.45□□□□□ -0.42
CHCHD3-206ENST00000496427 SPDYE2BA6NHP3 402 aa12.45□□□□□ -0.42
CHCHD3-206ENST00000496427 SPDYE6P0CI01 402 aa12.45□□□□□ -0.42
CHCHD3-206ENST00000496427 SPDYE2Q495Y8 402 aa12.45□□□□□ -0.42
CHCHD3-206ENST00000496427 JPH4Q96JJ6 628 aa12.45□□□□□ -0.42
CHCHD3-206ENST00000496427 HAX1O00165 279 aa12.44□□□□□ -0.42
CHCHD3-206ENST00000496427 FAM69CQ0P6D2 419 aa12.42□□□□□ -0.42
CHCHD3-206ENST00000496427 PPRC1Q5VV67 1664 aaKnown RBP12.41□□□□□ -0.42
CHCHD3-206ENST00000496427 KIAA0586Q9BVV6 1533 aa12.37□□□□□ -0.43
CHCHD3-206ENST00000496427 NPM1P06748 294 aaKnown RBP eCLIP12.36□□□□□ -0.43
CHCHD3-206ENST00000496427 TTBK1Q5TCY1 1321 aaPredicted RBP12.34□□□□□ -0.43
CHCHD3-206ENST00000496427 IGF1RP08069 1367 aa12.32□□□□□ -0.44
CHCHD3-206ENST00000496427 IQGAP2Q13576 1575 aa12.32□□□□□ -0.44
CHCHD3-206ENST00000496427 KIF27Q86VH2 1401 aa12.32□□□□□ -0.44
CHCHD3-206ENST00000496427 KDM4FA0A1W2PPD8 638 aa12.32□□□□□ -0.44
CHCHD3-206ENST00000496427 ABCC2Q92887 1545 aa12.3□□□□□ -0.44
CHCHD3-206ENST00000496427 SPDYE1Q8NFV5 336 aaPredicted RBP12.29□□□□□ -0.44
CHCHD3-206ENST00000496427 ZCCHC11Q5TAX3 1644 aaKnown RBP12.29□□□□□ -0.44
CHCHD3-206ENST00000496427 GLI2P10070 1586 aa12.28□□□□□ -0.44
CHCHD3-206ENST00000496427 MAP3K4Q9Y6R4 1608 aa12.28□□□□□ -0.44
CHCHD3-206ENST00000496427 PTPRGP23470 1445 aa12.28□□□□□ -0.44
CHCHD3-206ENST00000496427 ASXL2Q76L83 1435 aa12.27□□□□□ -0.45
CHCHD3-206ENST00000496427 CTTNBP2Q8WZ74 1663 aa12.26□□□□□ -0.45
CHCHD3-206ENST00000496427 CARMIL1Q5VZK9 1371 aa12.25□□□□□ -0.45
CHCHD3-206ENST00000496427 TNIKQ9UKE5 1360 aa12.25□□□□□ -0.45
CHCHD3-206ENST00000496427 DISP1Q96F81 1524 aa12.25□□□□□ -0.45
CHCHD3-206ENST00000496427 KIAA0556O60303 1618 aa12.24□□□□□ -0.45
CHCHD3-206ENST00000496427 ADGRL1O94910 1474 aa12.24□□□□□ -0.45
CHCHD3-206ENST00000496427 CARMIL2Q6F5E8 1435 aa12.24□□□□□ -0.45
CHCHD3-206ENST00000496427 PLB1Q6P1J6 1458 aa12.22□□□□□ -0.45
CHCHD3-206ENST00000496427 CLEC11AQ9Y240 323 aa12.22□□□□□ -0.45
CHCHD3-206ENST00000496427 UHRF1BP1LA0JNW5 1464 aa12.21□□□□□ -0.45
CHCHD3-206ENST00000496427 PRKAR2AP13861 404 aaKnown RBP12.21□□□□□ -0.45
CHCHD3-206ENST00000496427 ZNF692Q9BU19 519 aaPredicted RBP12.21□□□□□ -0.45
CHCHD3-206ENST00000496427 SSUH2Q9Y2M2 353 aa12.21□□□□□ -0.45
CHCHD3-206ENST00000496427 EPRSP07814 1512 aaKnown RBP12.21□□□□□ -0.46
CHCHD3-206ENST00000496427 COL17A1Q9UMD9 1497 aaPredicted RBP12.21□□□□□ -0.46
CHCHD3-206ENST00000496427 UACAQ9BZF9 1416 aa12.2□□□□□ -0.46
CHCHD3-206ENST00000496427 UGGT2Q9NYU1 1516 aa12.19□□□□□ -0.46
CHCHD3-206ENST00000496427 KDM5BQ9UGL1 1544 aa12.19□□□□□ -0.46
CHCHD3-206ENST00000496427 HECW2Q9P2P5 1572 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms