RNA–Protein interactions for RNA: ENST00000496390.5

GAB3-206, Transcript of GRB2 associated binding protein 3, humanhuman

TSL 1 (best)

Gene GAB3, Length 4,240 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAB3-206ENST00000496390 NPM1P06748 294 aaKnown RBP eCLIP9.5□□□□□ -0.89
GAB3-206ENST00000496390 TOPBP1Q92547 1522 aa9.49□□□□□ -0.89
GAB3-206ENST00000496390 PRDM2Q13029 1718 aa9.49□□□□□ -0.89
GAB3-206ENST00000496390 SENP3Q9H4L4 574 aaPredicted RBP9.48□□□□□ -0.89
GAB3-206ENST00000496390 WRNQ14191 1432 aaPredicted RBP eCLIP9.48□□□□□ -0.894e-6■■■■□ 19.5
GAB3-206ENST00000496390 WDR97A6NE52 1622 aa9.47□□□□□ -0.89
GAB3-206ENST00000496390 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.47□□□□□ -0.89
GAB3-206ENST00000496390 ZBTB22O15209 634 aa9.45□□□□□ -0.9
GAB3-206ENST00000496390 URB2Q14146 1524 aaKnown RBP9.45□□□□□ -0.9
GAB3-206ENST00000496390 PAXIP1Q6ZW49 1069 aaPredicted RBP9.45□□□□□ -0.9
GAB3-206ENST00000496390 PCGF6Q9BYE7 350 aa9.44□□□□□ -0.9
GAB3-206ENST00000496390 POLR3GLQ9BT43 218 aa9.43□□□□□ -0.9
GAB3-206ENST00000496390 GRIN2BQ13224 1484 aa9.43□□□□□ -0.9
GAB3-206ENST00000496390 PPP4R3CPQ6ZMV5 832 aa9.43□□□□□ -0.9
GAB3-206ENST00000496390 NPM3O75607 178 aaKnown RBP9.42□□□□□ -0.9
GAB3-206ENST00000496390 TRHP20396 242 aaPredicted RBP9.42□□□□□ -0.9
GAB3-206ENST00000496390 MAGI1Q96QZ7 1491 aaPredicted RBP9.41□□□□□ -0.9
GAB3-206ENST00000496390 MYT1LQ9UL68 1186 aa9.41□□□□□ -0.9
GAB3-206ENST00000496390 ACIN1Q9UKV3 1341 aaKnown RBP9.41□□□□□ -0.9
GAB3-206ENST00000496390 SYNJ1O43426 1573 aa9.39□□□□□ -0.91
GAB3-206ENST00000496390 FGD5Q6ZNL6 1462 aa9.38□□□□□ -0.91
GAB3-206ENST00000496390 TDRD9Q8NDG6 1382 aaKnown RBP9.37□□□□□ -0.91
GAB3-206ENST00000496390 POLA1P09884 1462 aaPredicted RBP9.37□□□□□ -0.91
GAB3-206ENST00000496390 GAPVD1Q14C86 1478 aa9.37□□□□□ -0.91
GAB3-206ENST00000496390 CYB5RLQ6IPT4 315 aa9.35□□□□□ -0.91
GAB3-206ENST00000496390 KIF27Q86VH2 1401 aa9.35□□□□□ -0.91
GAB3-206ENST00000496390 VSIG10Q8N0Z9 540 aa9.35□□□□□ -0.91
GAB3-206ENST00000496390 AQRO60306 1485 aaKnown RBP eCLIP9.34□□□□□ -0.912e-7■■■■■ 37.3
GAB3-206ENST00000496390 SYNJ2O15056 1496 aa9.33□□□□□ -0.92
GAB3-206ENST00000496390 TMEM132AQ24JP5 1023 aa9.31□□□□□ -0.92
GAB3-206ENST00000496390 SNAPC4Q5SXM2 1469 aa9.31□□□□□ -0.92
GAB3-206ENST00000496390 FHAD1B1AJZ9 1412 aa9.31□□□□□ -0.92
GAB3-206ENST00000496390 NEUROD1Q13562 356 aa9.3□□□□□ -0.92
GAB3-206ENST00000496390 ANP32EQ9BTT0 268 aa9.3□□□□□ -0.92
GAB3-206ENST00000496390 EIF4G3O43432 1585 aaKnown RBP9.3□□□□□ -0.92
GAB3-206ENST00000496390 CARMIL2Q6F5E8 1435 aa9.3□□□□□ -0.92
GAB3-206ENST00000496390 ABCA10Q8WWZ4 1543 aa9.29□□□□□ -0.92
GAB3-206ENST00000496390 RAD54L2Q9Y4B4 1467 aa9.29□□□□□ -0.92
GAB3-206ENST00000496390 FOXD4L1Q9NU39 408 aa9.29□□□□□ -0.92
GAB3-206ENST00000496390 ZNF608Q9ULD9 1512 aaPredicted RBP9.28□□□□□ -0.92
GAB3-206ENST00000496390 PPP6R1Q9UPN7 881 aa9.27□□□□□ -0.93
GAB3-206ENST00000496390 CUX1P39880 1505 aa9.25□□□□□ -0.93
GAB3-206ENST00000496390 ZEB1P37275 1124 aaPredicted RBP9.24□□□□□ -0.93
GAB3-206ENST00000496390 CDK11BP21127 795 aaKnown RBP9.23□□□□□ -0.93
GAB3-206ENST00000496390 ERICH3Q5RHP9 1530 aa9.23□□□□□ -0.93
GAB3-206ENST00000496390 CDK11AQ9UQ88 783 aaPredicted RBP9.23□□□□□ -0.93
GAB3-206ENST00000496390 TRIM26Q12899 539 aaPredicted RBP9.23□□□□□ -0.93
GAB3-206ENST00000496390 TOP2BQ02880 1626 aa9.22□□□□□ -0.93
GAB3-206ENST00000496390 ARHGEF11O15085 1522 aa9.22□□□□□ -0.93
GAB3-206ENST00000496390 TARBP1Q13395 1621 aaKnown RBP9.22□□□□□ -0.93
GAB3-206ENST00000496390 JPH4Q96JJ6 628 aa9.21□□□□□ -0.94
GAB3-206ENST00000496390 UBTFP17480 764 aaKnown RBP9.2□□□□□ -0.94
GAB3-206ENST00000496390 GRIN2AQ12879 1464 aa9.2□□□□□ -0.94
GAB3-206ENST00000496390 CARMIL1Q5VZK9 1371 aa9.19□□□□□ -0.94
GAB3-206ENST00000496390 EEA1Q15075 1411 aa9.18□□□□□ -0.94
GAB3-206ENST00000496390 KDM2AQ9Y2K7 1162 aa9.18□□□□□ -0.94
GAB3-206ENST00000496390 BIVM-ERCC5R4GMW8 1640 aa9.17□□□□□ -0.94
GAB3-206ENST00000496390 GOLGA3Q08378 1498 aa9.16□□□□□ -0.94
GAB3-206ENST00000496390 CHD1O14646 1710 aa9.16□□□□□ -0.94
GAB3-206ENST00000496390 RIMBP3CA6NJZ7 1639 aa9.16□□□□□ -0.94
GAB3-206ENST00000496390 RIMBP3BA6NNM3 1639 aa9.16□□□□□ -0.94
GAB3-206ENST00000496390 RIMBP3Q9UFD9 1639 aa9.16□□□□□ -0.94
GAB3-206ENST00000496390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.15□□□□□ -0.94
GAB3-206ENST00000496390 HNRNPUL2Q1KMD3 747 aaKnown RBP9.15□□□□□ -0.94
GAB3-206ENST00000496390 CUL7Q14999 1698 aa9.15□□□□□ -0.95
GAB3-206ENST00000496390 PRG4Q92954 1404 aaPredicted RBP9.14□□□□□ -0.95
GAB3-206ENST00000496390 PBRM1Q86U86 1689 aa9.14□□□□□ -0.95
GAB3-206ENST00000496390 PTPRGP23470 1445 aa9.14□□□□□ -0.95
GAB3-206ENST00000496390 KIAA0586Q9BVV6 1533 aa9.13□□□□□ -0.95
GAB3-206ENST00000496390 ADAMTS12P58397 1594 aa9.13□□□□□ -0.95
GAB3-206ENST00000496390 FBXO3Q9UK99 471 aa9.12□□□□□ -0.95
GAB3-206ENST00000496390 NUP160Q12769 1436 aa9.12□□□□□ -0.95
GAB3-206ENST00000496390 TNIKQ9UKE5 1360 aa9.12□□□□□ -0.95
GAB3-206ENST00000496390 ABCA5Q8WWZ7 1642 aa9.11□□□□□ -0.95
GAB3-206ENST00000496390 ZBTB7CA1YPR0 619 aa9.11□□□□□ -0.95
GAB3-206ENST00000496390 RAPGEF2Q9Y4G8 1499 aa9.1□□□□□ -0.95
GAB3-206ENST00000496390 TSHZ2Q9NRE2 1034 aa9.1□□□□□ -0.95
GAB3-206ENST00000496390 FAM69CQ0P6D2 419 aa9.08□□□□□ -0.96
GAB3-206ENST00000496390 CLASP1Q7Z460 1538 aa9.08□□□□□ -0.96
GAB3-206ENST00000496390 ARAP1Q96P48 1450 aa9.08□□□□□ -0.96
GAB3-206ENST00000496390 IGF1RP08069 1367 aa9.07□□□□□ -0.96
GAB3-206ENST00000496390 ANO8Q9HCE9 1232 aaPredicted RBP9.07□□□□□ -0.96
GAB3-206ENST00000496390 CCDC9Q9Y3X0 531 aaKnown RBP9.07□□□□□ -0.96
GAB3-206ENST00000496390 UBE2Q2Q8WVN8 375 aa9.05□□□□□ -0.96
GAB3-206ENST00000496390 PLB1Q6P1J6 1458 aa9.05□□□□□ -0.96
GAB3-206ENST00000496390 CEP170Q5SW79 1584 aa9.04□□□□□ -0.96
GAB3-206ENST00000496390 SPRYD3Q8NCJ5 442 aa9.04□□□□□ -0.96
GAB3-206ENST00000496390 ATP1B4Q9UN42 357 aaPredicted RBP9.04□□□□□ -0.96
GAB3-206ENST00000496390 TEX14Q8IWB6 1497 aa9.02□□□□□ -0.97
GAB3-206ENST00000496390 PLEKHD1A6NEE1 506 aa9.01□□□□□ -0.97
GAB3-206ENST00000496390 IQGAP2Q13576 1575 aa9.01□□□□□ -0.97
GAB3-206ENST00000496390 PLEKHG5O94827 1062 aa9□□□□□ -0.97
GAB3-206ENST00000496390 NEUROD2Q15784 382 aa9□□□□□ -0.97
GAB3-206ENST00000496390 UACAQ9BZF9 1416 aa9□□□□□ -0.97
GAB3-206ENST00000496390 PHLDB1Q86UU1 1377 aa8.97□□□□□ -0.97
GAB3-206ENST00000496390 ESF1Q9H501 851 aaKnown RBP8.97□□□□□ -0.97
GAB3-206ENST00000496390 USP35Q9P2H5 1018 aa8.96□□□□□ -0.98
GAB3-206ENST00000496390 ECM2O94769 699 aaPredicted RBP8.95□□□□□ -0.98
GAB3-206ENST00000496390 KCNH8Q96L42 1107 aa8.95□□□□□ -0.98
GAB3-206ENST00000496390 HMGB1P09429 215 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms