RNA–Protein interactions for RNA: ENST00000495399.1

C9orf135-204, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 2

Gene C9orf135, Length 502 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-204ENST00000495399 ERCC6L2Q5T890 1561 aa14.52□□□□□ -0.08
C9orf135-204ENST00000495399 CHMP7Q8WUX9 453 aaPredicted RBP14.49□□□□□ -0.09
C9orf135-204ENST00000495399 MAGI1Q96QZ7 1491 aaPredicted RBP14.49□□□□□ -0.09
C9orf135-204ENST00000495399 CCDC88BA6NC98 1476 aa14.48□□□□□ -0.09
C9orf135-204ENST00000495399 SYNJ2O15056 1496 aa14.46□□□□□ -0.09
C9orf135-204ENST00000495399 WDR97A6NE52 1622 aa14.45□□□□□ -0.1
C9orf135-204ENST00000495399 SOGA1O94964 1423 aa14.44□□□□□ -0.1
C9orf135-204ENST00000495399 GRIN2BQ13224 1484 aa14.4□□□□□ -0.1
C9orf135-204ENST00000495399 CAPN15O75808 1086 aa14.39□□□□□ -0.11
C9orf135-204ENST00000495399 DSG3P32926 999 aa14.36□□□□□ -0.11
C9orf135-204ENST00000495399 CEP170Q5SW79 1584 aa14.35□□□□□ -0.11
C9orf135-204ENST00000495399 ABCC10Q5T3U5 1492 aa14.35□□□□□ -0.11
C9orf135-204ENST00000495399 HECW2Q9P2P5 1572 aa14.34□□□□□ -0.11
C9orf135-204ENST00000495399 FGD5Q6ZNL6 1462 aa14.33□□□□□ -0.12
C9orf135-204ENST00000495399 KDM6BO15054 1643 aa14.32□□□□□ -0.12
C9orf135-204ENST00000495399 SHROOM2Q13796 1616 aa14.32□□□□□ -0.12
C9orf135-204ENST00000495399 PBRM1Q86U86 1689 aa14.32□□□□□ -0.12
C9orf135-204ENST00000495399 FAM69CQ0P6D2 419 aa14.3□□□□□ -0.12
C9orf135-204ENST00000495399 SPINK5Q9NQ38 1064 aaPredicted RBP14.3□□□□□ -0.12
C9orf135-204ENST00000495399 U3KPZ7 1027 aaPredicted RBP14.3□□□□□ -0.12
C9orf135-204ENST00000495399 DIP2BQ9P265 1576 aa14.3□□□□□ -0.12
C9orf135-204ENST00000495399 FBXO41Q8TF61 875 aa14.28□□□□□ -0.12
C9orf135-204ENST00000495399 NUP160Q12769 1436 aa14.27□□□□□ -0.12
C9orf135-204ENST00000495399 NPM3O75607 178 aaKnown RBP14.26□□□□□ -0.13
C9orf135-204ENST00000495399 ADGRL1O94910 1474 aa14.25□□□□□ -0.13
C9orf135-204ENST00000495399 MAPKBP1O60336 1514 aa14.25□□□□□ -0.13
C9orf135-204ENST00000495399 CUX1P39880 1505 aa14.25□□□□□ -0.13
C9orf135-204ENST00000495399 GRIN2AQ12879 1464 aa14.24□□□□□ -0.13
C9orf135-204ENST00000495399 ABCA5Q8WWZ7 1642 aa14.22□□□□□ -0.13
C9orf135-204ENST00000495399 TSPOAP1O95153 1857 aa14.19□□□□□ -0.14
C9orf135-204ENST00000495399 ABCA10Q8WWZ4 1543 aa14.15□□□□□ -0.14
C9orf135-204ENST00000495399 ADAMTS12P58397 1594 aa14.14□□□□□ -0.15
C9orf135-204ENST00000495399 ADCY10Q96PN6 1610 aa14.14□□□□□ -0.15
C9orf135-204ENST00000495399 PRG4Q92954 1404 aaPredicted RBP14.13□□□□□ -0.15
C9orf135-204ENST00000495399 PPRC1Q5VV67 1664 aaKnown RBP14.11□□□□□ -0.15
C9orf135-204ENST00000495399 LMTK3Q96Q04 1460 aa14.11□□□□□ -0.15
C9orf135-204ENST00000495399 COL17A1Q9UMD9 1497 aaPredicted RBP14.09□□□□□ -0.15
C9orf135-204ENST00000495399 ILDR2Q71H61 639 aa14.07□□□□□ -0.16
C9orf135-204ENST00000495399 JPH4Q96JJ6 628 aa14.06□□□□□ -0.16
C9orf135-204ENST00000495399 SOCS7O14512 581 aa14.05□□□□□ -0.16
C9orf135-204ENST00000495399 NPM1P06748 294 aaKnown RBP eCLIP14.05□□□□□ -0.16
C9orf135-204ENST00000495399 FHAD1B1AJZ9 1412 aa14.04□□□□□ -0.16
C9orf135-204ENST00000495399 GLI2P10070 1586 aa13.98□□□□□ -0.17
C9orf135-204ENST00000495399 RUSC2Q8N2Y8 1516 aa13.97□□□□□ -0.17
C9orf135-204ENST00000495399 ABCB7O75027 752 aa13.97□□□□□ -0.17
C9orf135-204ENST00000495399 APLP2Q06481 763 aa13.95□□□□□ -0.18
C9orf135-204ENST00000495399 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
C9orf135-204ENST00000495399 ERICH3Q5RHP9 1530 aa13.93□□□□□ -0.18
C9orf135-204ENST00000495399 TOP2BQ02880 1626 aa13.92□□□□□ -0.18
C9orf135-204ENST00000495399 MAP3K4Q9Y6R4 1608 aa13.88□□□□□ -0.19
C9orf135-204ENST00000495399 ASXL2Q76L83 1435 aa13.88□□□□□ -0.19
C9orf135-204ENST00000495399 WRNQ14191 1432 aaPredicted RBP eCLIP13.86□□□□□ -0.19
C9orf135-204ENST00000495399 PLB1Q6P1J6 1458 aa13.85□□□□□ -0.19
C9orf135-204ENST00000495399 ABCC2Q92887 1545 aa13.85□□□□□ -0.19
C9orf135-204ENST00000495399 DISP3Q9P2K9 1392 aa13.84□□□□□ -0.19
C9orf135-204ENST00000495399 EPRSP07814 1512 aaKnown RBP13.82□□□□□ -0.2
C9orf135-204ENST00000495399 CUL7Q14999 1698 aa13.8□□□□□ -0.2
C9orf135-204ENST00000495399 RBM42Q9BTD8 480 aaKnown RBP13.79□□□□□ -0.2
C9orf135-204ENST00000495399 TEX14Q8IWB6 1497 aa13.79□□□□□ -0.2
C9orf135-204ENST00000495399 KIAA0586Q9BVV6 1533 aa13.79□□□□□ -0.2
C9orf135-204ENST00000495399 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
C9orf135-204ENST00000495399 PTPRGP23470 1445 aa13.78□□□□□ -0.2
C9orf135-204ENST00000495399 PTPRMP28827 1452 aa13.78□□□□□ -0.2
C9orf135-204ENST00000495399 KIF21BO75037 1637 aa13.78□□□□□ -0.2
C9orf135-204ENST00000495399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.77□□□□□ -0.21
C9orf135-204ENST00000495399 ADAMTSL3P82987 1691 aa13.77□□□□□ -0.21
C9orf135-204ENST00000495399 HNRNPUL2Q1KMD3 747 aaKnown RBP13.77□□□□□ -0.21
C9orf135-204ENST00000495399 UHRF1BP1LA0JNW5 1464 aa13.76□□□□□ -0.21
C9orf135-204ENST00000495399 PCF11O94913 1555 aaKnown RBP13.75□□□□□ -0.21
C9orf135-204ENST00000495399 SLC4A2P04920 1241 aa13.74□□□□□ -0.21
C9orf135-204ENST00000495399 CERKQ8TCT0 537 aa13.74□□□□□ -0.21
C9orf135-204ENST00000495399 KDM5BQ9UGL1 1544 aa13.72□□□□□ -0.21
C9orf135-204ENST00000495399 CHRDL2Q6WN34 429 aa13.71□□□□□ -0.21
C9orf135-204ENST00000495399 SPATA31D1Q6ZQQ2 1576 aa13.71□□□□□ -0.22
C9orf135-204ENST00000495399 TNIKQ9UKE5 1360 aa13.7□□□□□ -0.22
C9orf135-204ENST00000495399 UACAQ9BZF9 1416 aa13.67□□□□□ -0.22
C9orf135-204ENST00000495399 MAGI3Q5TCQ9 1506 aa13.67□□□□□ -0.22
C9orf135-204ENST00000495399 ZCCHC11Q5TAX3 1644 aaKnown RBP13.67□□□□□ -0.22
C9orf135-204ENST00000495399 TTBK1Q5TCY1 1321 aaPredicted RBP13.64□□□□□ -0.23
C9orf135-204ENST00000495399 SAMD1Q6SPF0 538 aaPredicted RBP13.64□□□□□ -0.23
C9orf135-204ENST00000495399 BCORL1Q5H9F3 1711 aa13.62□□□□□ -0.23
C9orf135-204ENST00000495399 MADDQ8WXG6 1647 aa13.62□□□□□ -0.23
C9orf135-204ENST00000495399 HSPA2P54652 639 aa13.62□□□□□ -0.23
C9orf135-204ENST00000495399 IGF1RP08069 1367 aa13.6□□□□□ -0.23
C9orf135-204ENST00000495399 CFAP43Q8NDM7 1665 aa13.6□□□□□ -0.23
C9orf135-204ENST00000495399 WDR7Q9Y4E6 1490 aa13.6□□□□□ -0.23
C9orf135-204ENST00000495399 ARAP3Q8WWN8 1544 aa13.59□□□□□ -0.23
C9orf135-204ENST00000495399 DISP1Q96F81 1524 aa13.59□□□□□ -0.23
C9orf135-204ENST00000495399 CARMIL2Q6F5E8 1435 aa13.59□□□□□ -0.23
C9orf135-204ENST00000495399 CD109Q6YHK3 1445 aa13.59□□□□□ -0.23
C9orf135-204ENST00000495399 SP7Q8TDD2 431 aaPredicted RBP13.53□□□□□ -0.24
C9orf135-204ENST00000495399 RIMS1Q86UR5 1692 aaKnown RBP13.53□□□□□ -0.24
C9orf135-204ENST00000495399 IQGAP2Q13576 1575 aa13.51□□□□□ -0.25
C9orf135-204ENST00000495399 FRMPD1Q5SYB0 1578 aa13.47□□□□□ -0.25
C9orf135-204ENST00000495399 STRCQ7RTU9 1775 aa13.47□□□□□ -0.25
C9orf135-204ENST00000495399 UGGT2Q9NYU1 1516 aa13.45□□□□□ -0.26
C9orf135-204ENST00000495399 KCNH8Q96L42 1107 aa13.45□□□□□ -0.26
C9orf135-204ENST00000495399 RAPGEF3O95398 923 aa13.44□□□□□ -0.26
C9orf135-204ENST00000495399 POLA2Q14181 598 aa13.44□□□□□ -0.26
C9orf135-204ENST00000495399 KIAA0556O60303 1618 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms