RNA–Protein interactions for RNA: ENST00000495366.5

SSUH2-216, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 2

Gene SSUH2, Length 2,386 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-216ENST00000495366 RAPGEF2Q9Y4G8 1499 aa23.48■■□□□ 1.35
SSUH2-216ENST00000495366 ITGAEP38570 1179 aa23.44■■□□□ 1.34
SSUH2-216ENST00000495366 CDK11AQ9UQ88 783 aaPredicted RBP23.44■■□□□ 1.34
SSUH2-216ENST00000495366 RTN4Q9NQC3 1192 aaKnown RBP23.43■■□□□ 1.34
SSUH2-216ENST00000495366 CC2D2AQ9P2K1 1620 aa23.4■■□□□ 1.34
SSUH2-216ENST00000495366 CLIP1P30622 1438 aa23.39■■□□□ 1.34
SSUH2-216ENST00000495366 NOP58Q9Y2X3 529 aaKnown RBP23.38■■□□□ 1.33
SSUH2-216ENST00000495366 PRDM2Q13029 1718 aa23.37■■□□□ 1.33
SSUH2-216ENST00000495366 C11orf95C9JLR9 678 aaPredicted RBP23.35■■□□□ 1.33
SSUH2-216ENST00000495366 NBR1Q14596 966 aa23.35■■□□□ 1.33
SSUH2-216ENST00000495366 GLIPR1L2Q4G1C9 344 aa23.32■■□□□ 1.32
SSUH2-216ENST00000495366 RANGAP1P46060 587 aaPredicted RBP23.32■■□□□ 1.32
SSUH2-216ENST00000495366 CADPSQ9ULU8 1353 aa23.31■■□□□ 1.32
SSUH2-216ENST00000495366 RTL5Q5HYW3 569 aaPredicted RBP23.31■■□□□ 1.32
SSUH2-216ENST00000495366 PRXQ9BXM0 1461 aa23.3■■□□□ 1.32
SSUH2-216ENST00000495366 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
SSUH2-216ENST00000495366 KIF27Q86VH2 1401 aa23.26■■□□□ 1.31
SSUH2-216ENST00000495366 VPS8Q8N3P4 1428 aa23.25■■□□□ 1.31
SSUH2-216ENST00000495366 RSPH6AQ9H0K4 717 aa23.21■■□□□ 1.31
SSUH2-216ENST00000495366 ZMYND15Q9H091 742 aa23.2■■□□□ 1.3
SSUH2-216ENST00000495366 WASHC2AQ641Q2 1341 aa23.19■■□□□ 1.3
SSUH2-216ENST00000495366 PAK3O75914 559 aaPredicted RBP23.15■■□□□ 1.3
SSUH2-216ENST00000495366 KCNH8Q96L42 1107 aa23.15■■□□□ 1.3
SSUH2-216ENST00000495366 WASHC2CQ9Y4E1 1318 aa23.14■■□□□ 1.3
SSUH2-216ENST00000495366 CUX2O14529 1486 aa23.11■■□□□ 1.29
SSUH2-216ENST00000495366 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
SSUH2-216ENST00000495366 FANCD2Q9BXW9 1451 aa23.09■■□□□ 1.29
SSUH2-216ENST00000495366 ARAP1Q96P48 1450 aa23.08■■□□□ 1.28
SSUH2-216ENST00000495366 IGF1RP08069 1367 aa23.05■■□□□ 1.28
SSUH2-216ENST00000495366 NESP48681 1621 aa23.04■■□□□ 1.28
SSUH2-216ENST00000495366 VSIG10Q8N0Z9 540 aa23.02■■□□□ 1.28
SSUH2-216ENST00000495366 USP35Q9P2H5 1018 aa23.01■■□□□ 1.27
SSUH2-216ENST00000495366 HNRNPUL2Q1KMD3 747 aaKnown RBP22.98■■□□□ 1.27
SSUH2-216ENST00000495366 TIMELESSQ9UNS1 1208 aa22.97■■□□□ 1.27
SSUH2-216ENST00000495366 IPO9Q96P70 1041 aaKnown RBP22.96■■□□□ 1.27
SSUH2-216ENST00000495366 DNMBPQ6XZF7 1577 aa22.94■■□□□ 1.26
SSUH2-216ENST00000495366 CARMIL1Q5VZK9 1371 aa22.94■■□□□ 1.26
SSUH2-216ENST00000495366 ARHGAP35Q9NRY4 1499 aa22.94■■□□□ 1.26
SSUH2-216ENST00000495366 TOPBP1Q92547 1522 aa22.91■■□□□ 1.26
SSUH2-216ENST00000495366 RAD54L2Q9Y4B4 1467 aa22.91■■□□□ 1.26
SSUH2-216ENST00000495366 KANK4Q5T7N3 995 aaPredicted RBP22.89■■□□□ 1.26
SSUH2-216ENST00000495366 PPP4R2Q9NY27 417 aa22.89■■□□□ 1.26
SSUH2-216ENST00000495366 DNAJC5BQ9UF47 199 aa22.89■■□□□ 1.26
SSUH2-216ENST00000495366 POLA1P09884 1462 aaPredicted RBP22.88■■□□□ 1.25
SSUH2-216ENST00000495366 ZBTB47Q9UFB7 747 aaPredicted RBP22.88■■□□□ 1.25
SSUH2-216ENST00000495366 BRPF3Q9ULD4 1205 aa22.87■■□□□ 1.25
SSUH2-216ENST00000495366 CCER2I3L3R5 266 aa22.86■■□□□ 1.25
SSUH2-216ENST00000495366 ANP32AP39687 249 aaKnown RBP22.85■■□□□ 1.25
SSUH2-216ENST00000495366 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
SSUH2-216ENST00000495366 FGD1P98174 961 aa22.84■■□□□ 1.25
SSUH2-216ENST00000495366 ABCA10Q8WWZ4 1543 aa22.83■■□□□ 1.25
SSUH2-216ENST00000495366 FAM43AQ8N2R8 423 aa22.82■■□□□ 1.24
SSUH2-216ENST00000495366 PDE4CQ08493 712 aa22.79■■□□□ 1.24
SSUH2-216ENST00000495366 TRIM52Q96A61 297 aa22.79■■□□□ 1.24
SSUH2-216ENST00000495366 URB2Q14146 1524 aaKnown RBP22.79■■□□□ 1.24
SSUH2-216ENST00000495366 AAMPQ13685 434 aa22.78■■□□□ 1.24
SSUH2-216ENST00000495366 NEFMP07197 916 aa22.77■■□□□ 1.24
SSUH2-216ENST00000495366 DHX57Q6P158 1386 aaKnown RBP22.75■■□□□ 1.23
SSUH2-216ENST00000495366 RBM10P98175 930 aaKnown RBP22.73■■□□□ 1.23
SSUH2-216ENST00000495366 RRP9O43818 475 aaKnown RBP22.69■■□□□ 1.22
SSUH2-216ENST00000495366 PDS5BQ9NTI5 1447 aa22.69■■□□□ 1.22
SSUH2-216ENST00000495366 WDR97A6NE52 1622 aa22.69■■□□□ 1.22
SSUH2-216ENST00000495366 GSE1Q14687 1217 aa22.68■■□□□ 1.22
SSUH2-216ENST00000495366 KIF21AQ7Z4S6 1674 aa22.68■■□□□ 1.22
SSUH2-216ENST00000495366 RRBP1Q9P2E9 1410 aaKnown RBP22.66■■□□□ 1.22
SSUH2-216ENST00000495366 A0A0U1RQG5 324 aaPredicted RBP22.66■■□□□ 1.22
SSUH2-216ENST00000495366 P3H3Q8IVL6 736 aa22.66■■□□□ 1.22
SSUH2-216ENST00000495366 CUL7Q14999 1698 aa22.66■■□□□ 1.22
SSUH2-216ENST00000495366 PPM1GO15355 546 aaPredicted RBP22.65■■□□□ 1.22
SSUH2-216ENST00000495366 IRX6P78412 446 aaPredicted RBP22.65■■□□□ 1.22
SSUH2-216ENST00000495366 PDIA4P13667 645 aaKnown RBP22.64■■□□□ 1.22
SSUH2-216ENST00000495366 TDRD9Q8NDG6 1382 aaKnown RBP22.64■■□□□ 1.21
SSUH2-216ENST00000495366 TIAM1Q13009 1591 aa22.63■■□□□ 1.21
SSUH2-216ENST00000495366 HSP90AA2PQ14568 343 aaPredicted RBP22.61■■□□□ 1.21
SSUH2-216ENST00000495366 ABCA5Q8WWZ7 1642 aa22.59■■□□□ 1.21
SSUH2-216ENST00000495366 MAP3K1Q13233 1512 aa22.59■■□□□ 1.21
SSUH2-216ENST00000495366 CTTNBP2Q8WZ74 1663 aa22.58■■□□□ 1.21
SSUH2-216ENST00000495366 CCNB3Q8WWL7 1395 aa22.58■■□□□ 1.21
SSUH2-216ENST00000495366 FHOD3Q2V2M9 1422 aa22.58■■□□□ 1.2
SSUH2-216ENST00000495366 FHAD1B1AJZ9 1412 aa22.57■■□□□ 1.2
SSUH2-216ENST00000495366 PCF11O94913 1555 aaKnown RBP22.56■■□□□ 1.2
SSUH2-216ENST00000495366 PPP1R15AO75807 674 aaPredicted RBP22.56■■□□□ 1.2
SSUH2-216ENST00000495366 GAPVD1Q14C86 1478 aa22.56■■□□□ 1.2
SSUH2-216ENST00000495366 LRRC9Q6ZRR7 1453 aa22.54■■□□□ 1.2
SSUH2-216ENST00000495366 B4GALNT3Q6L9W6 998 aa22.54■■□□□ 1.2
SSUH2-216ENST00000495366 DDX10Q13206 875 aaKnown RBP22.53■■□□□ 1.2
SSUH2-216ENST00000495366 ATP1B4Q9UN42 357 aaPredicted RBP22.52■■□□□ 1.19
SSUH2-216ENST00000495366 EFCAB5A4FU69 1503 aa22.51■■□□□ 1.19
SSUH2-216ENST00000495366 ANP32CO43423 234 aa22.51■■□□□ 1.19
SSUH2-216ENST00000495366 TARBP1Q13395 1621 aaKnown RBP22.5■■□□□ 1.19
SSUH2-216ENST00000495366 CFAP43Q8NDM7 1665 aa22.5■■□□□ 1.19
SSUH2-216ENST00000495366 LAS1LQ9Y4W2 734 aaKnown RBP22.47■■□□□ 1.19
SSUH2-216ENST00000495366 PHLDB1Q86UU1 1377 aa22.46■■□□□ 1.19
SSUH2-216ENST00000495366 FYCO1Q9BQS8 1478 aa22.44■■□□□ 1.18
SSUH2-216ENST00000495366 HSP90AA1P07900 732 aaKnown RBP22.43■■□□□ 1.18
SSUH2-216ENST00000495366 CASKIN1Q8WXD9 1431 aa22.43■■□□□ 1.18
SSUH2-216ENST00000495366 FRAT1Q92837 279 aaPredicted RBP22.43■■□□□ 1.18
SSUH2-216ENST00000495366 BCL11BQ9C0K0 894 aaPredicted RBP22.43■■□□□ 1.18
SSUH2-216ENST00000495366 AQRO60306 1485 aaKnown RBP eCLIP22.4■■□□□ 1.181e-6■■■■□ 21.5
SSUH2-216ENST00000495366 HNRNPUQ00839 825 aaKnown RBP eCLIP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms