RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 TIAM1Q13009 1591 aa21.77■■□□□ 1.07
UBXN11-215ENST00000494942 YTHDC1Q96MU7 727 aaKnown RBP21.77■■□□□ 1.07
UBXN11-215ENST00000494942 THOC2Q8NI27 1593 aaKnown RBP21.73■■□□□ 1.07
UBXN11-215ENST00000494942 MRC2Q9UBG0 1479 aa21.71■■□□□ 1.07
UBXN11-215ENST00000494942 FHAD1B1AJZ9 1412 aa21.7■■□□□ 1.06
UBXN11-215ENST00000494942 URB2Q14146 1524 aaKnown RBP21.67■■□□□ 1.06
UBXN11-215ENST00000494942 LRRC9Q6ZRR7 1453 aa21.67■■□□□ 1.06
UBXN11-215ENST00000494942 WDR62O43379 1518 aa21.63■■□□□ 1.05
UBXN11-215ENST00000494942 DNMBPQ6XZF7 1577 aa21.63■■□□□ 1.05
UBXN11-215ENST00000494942 CFAP43Q8NDM7 1665 aa21.62■■□□□ 1.05
UBXN11-215ENST00000494942 RAB3GAP2Q9H2M9 1393 aa21.62■■□□□ 1.05
UBXN11-215ENST00000494942 ABCA10Q8WWZ4 1543 aa21.6■■□□□ 1.05
UBXN11-215ENST00000494942 TOPBP1Q92547 1522 aa21.6■■□□□ 1.05
UBXN11-215ENST00000494942 ITGAEP38570 1179 aa21.6■■□□□ 1.05
UBXN11-215ENST00000494942 SETD5Q9C0A6 1442 aa21.58■■□□□ 1.05
UBXN11-215ENST00000494942 EFCAB5A4FU69 1503 aa21.57■■□□□ 1.04
UBXN11-215ENST00000494942 PCF11O94913 1555 aaKnown RBP21.56■■□□□ 1.04
UBXN11-215ENST00000494942 PHLDB1Q86UU1 1377 aa21.56■■□□□ 1.04
UBXN11-215ENST00000494942 MAPKBP1O60336 1514 aa21.55■■□□□ 1.04
UBXN11-215ENST00000494942 CUL7Q14999 1698 aa21.55■■□□□ 1.04
UBXN11-215ENST00000494942 FYCO1Q9BQS8 1478 aa21.53■■□□□ 1.04
UBXN11-215ENST00000494942 POLA1P09884 1462 aaPredicted RBP21.53■■□□□ 1.04
UBXN11-215ENST00000494942 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.044e-14■■■■■ 52.8
UBXN11-215ENST00000494942 RAD54L2Q9Y4B4 1467 aa21.51■■□□□ 1.03
UBXN11-215ENST00000494942 CASKIN1Q8WXD9 1431 aa21.49■■□□□ 1.03
UBXN11-215ENST00000494942 CTTNBP2Q8WZ74 1663 aa21.48■■□□□ 1.03
UBXN11-215ENST00000494942 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.48■■□□□ 1.03
UBXN11-215ENST00000494942 FHOD3Q2V2M9 1422 aa21.46■■□□□ 1.03
UBXN11-215ENST00000494942 FAM50AQ14320 339 aaKnown RBP21.45■■□□□ 1.02
UBXN11-215ENST00000494942 P3H3Q8IVL6 736 aa21.45■■□□□ 1.02
UBXN11-215ENST00000494942 TIMELESSQ9UNS1 1208 aa21.43■■□□□ 1.02
UBXN11-215ENST00000494942 FMN1Q68DA7 1419 aa21.42■■□□□ 1.02
UBXN11-215ENST00000494942 ATP1B4Q9UN42 357 aaPredicted RBP21.4■■□□□ 1.02
UBXN11-215ENST00000494942 WDR97A6NE52 1622 aa21.39■■□□□ 1.02
UBXN11-215ENST00000494942 TARBP1Q13395 1621 aaKnown RBP21.35■■□□□ 1.01
UBXN11-215ENST00000494942 SNAPC4Q5SXM2 1469 aa21.33■■□□□ 1.01
UBXN11-215ENST00000494942 IFT140Q96RY7 1462 aa21.33■■□□□ 1.01
UBXN11-215ENST00000494942 ABCA5Q8WWZ7 1642 aa21.32■■□□□ 1
UBXN11-215ENST00000494942 FGD6Q6ZV73 1430 aa21.31■■□□□ 1
UBXN11-215ENST00000494942 SAMD9Q5K651 1589 aa21.31■■□□□ 1
UBXN11-215ENST00000494942 SIN3AQ96ST3 1273 aa21.29■■□□□ 1
UBXN11-215ENST00000494942 ZNF608Q9ULD9 1512 aaPredicted RBP21.27■■□□□ 1
UBXN11-215ENST00000494942 MTUS2Q5JR59 1369 aa21.27■□□□□ 0.99
UBXN11-215ENST00000494942 GAPVD1Q14C86 1478 aa21.27■□□□□ 0.99
UBXN11-215ENST00000494942 PPP1R15AO75807 674 aaPredicted RBP21.22■□□□□ 0.99
UBXN11-215ENST00000494942 TDRD9Q8NDG6 1382 aaKnown RBP21.22■□□□□ 0.99
UBXN11-215ENST00000494942 GRIN2BQ13224 1484 aa21.22■□□□□ 0.99
UBXN11-215ENST00000494942 HFM1A2PYH4 1435 aa21.22■□□□□ 0.99
UBXN11-215ENST00000494942 EIF4G3O43432 1585 aaKnown RBP21.21■□□□□ 0.99
UBXN11-215ENST00000494942 SUPT16HQ9Y5B9 1047 aaKnown RBP21.21■□□□□ 0.99
UBXN11-215ENST00000494942 CCDC18Q5T9S5 1454 aa21.2■□□□□ 0.98
UBXN11-215ENST00000494942 MYT1Q01538 1121 aa21.2■□□□□ 0.98
UBXN11-215ENST00000494942 LRRIQ1Q96JM4 1722 aa21.19■□□□□ 0.98
UBXN11-215ENST00000494942 SUPT6HQ7KZ85 1726 aaKnown RBP21.18■□□□□ 0.98
UBXN11-215ENST00000494942 MYOM3Q5VTT5 1437 aa21.18■□□□□ 0.98
UBXN11-215ENST00000494942 UACAQ9BZF9 1416 aa21.18■□□□□ 0.98
UBXN11-215ENST00000494942 EHBP1L1Q8N3D4 1523 aa21.18■□□□□ 0.98
UBXN11-215ENST00000494942 NCOA2Q15596 1464 aa21.17■□□□□ 0.98
UBXN11-215ENST00000494942 PTPN23Q9H3S7 1636 aa21.17■□□□□ 0.98
UBXN11-215ENST00000494942 DDX10Q13206 875 aaKnown RBP21.16■□□□□ 0.98
UBXN11-215ENST00000494942 PTPRKQ15262 1439 aa21.13■□□□□ 0.97
UBXN11-215ENST00000494942 TONSLQ96HA7 1378 aa21.13■□□□□ 0.97
UBXN11-215ENST00000494942 NAIPQ13075 1403 aa21.11■□□□□ 0.97
UBXN11-215ENST00000494942 ARHGEF11O15085 1522 aa21.1■□□□□ 0.97
UBXN11-215ENST00000494942 UGGT2Q9NYU1 1516 aa21.1■□□□□ 0.97
UBXN11-215ENST00000494942 KCNH8Q96L42 1107 aa21.1■□□□□ 0.97
UBXN11-215ENST00000494942 PBRM1Q86U86 1689 aa21.09■□□□□ 0.97
UBXN11-215ENST00000494942 CCER2I3L3R5 266 aa21.07■□□□□ 0.96
UBXN11-215ENST00000494942 HECW1Q76N89 1606 aa21.05■□□□□ 0.96
UBXN11-215ENST00000494942 TCOF1Q13428 1488 aaKnown RBP21.04■□□□□ 0.96
UBXN11-215ENST00000494942 ANP32CO43423 234 aa21.03■□□□□ 0.96
UBXN11-215ENST00000494942 MAGI3Q5TCQ9 1506 aa21.01■□□□□ 0.95
UBXN11-215ENST00000494942 IQGAP2Q13576 1575 aa21.01■□□□□ 0.95
UBXN11-215ENST00000494942 AKNAQ7Z591 1439 aa21■□□□□ 0.95
UBXN11-215ENST00000494942 GCC2Q8IWJ2 1684 aa20.99■□□□□ 0.95
UBXN11-215ENST00000494942 HIRIP3Q9BW71 556 aaPredicted RBP20.98■□□□□ 0.95
UBXN11-215ENST00000494942 ADAMTS12P58397 1594 aa20.97■□□□□ 0.95
UBXN11-215ENST00000494942 EPRSP07814 1512 aaKnown RBP20.97■□□□□ 0.95
UBXN11-215ENST00000494942 MIA2Q96PC5 1412 aa20.97■□□□□ 0.95
UBXN11-215ENST00000494942 MAGI1Q96QZ7 1491 aaPredicted RBP20.94■□□□□ 0.94
UBXN11-215ENST00000494942 KDM5BQ9UGL1 1544 aa20.94■□□□□ 0.94
UBXN11-215ENST00000494942 RRP7BPQ9NSQ0 103 aa20.89■□□□□ 0.94
UBXN11-215ENST00000494942 CHD1O14646 1710 aa20.88■□□□□ 0.93
UBXN11-215ENST00000494942 FBLN2P98095 1184 aa20.88■□□□□ 0.93
UBXN11-215ENST00000494942 SYNJ2O15056 1496 aa20.87■□□□□ 0.93
UBXN11-215ENST00000494942 CDK13Q14004 1512 aaKnown RBP20.86■□□□□ 0.93
UBXN11-215ENST00000494942 CHIC2Q9UKJ5 165 aa20.86■□□□□ 0.93
UBXN11-215ENST00000494942 DENND4BO75064 1496 aaPredicted RBP20.85■□□□□ 0.93
UBXN11-215ENST00000494942 CHMP7Q8WUX9 453 aaPredicted RBP20.84■□□□□ 0.93
UBXN11-215ENST00000494942 TRIM52Q96A61 297 aa20.84■□□□□ 0.93
UBXN11-215ENST00000494942 TSHZ2Q9NRE2 1034 aa20.83■□□□□ 0.93
UBXN11-215ENST00000494942 FKBP8Q14318 412 aa20.83■□□□□ 0.92
UBXN11-215ENST00000494942 NEFLP07196 543 aa20.82■□□□□ 0.92
UBXN11-215ENST00000494942 KDM6BO15054 1643 aa20.81■□□□□ 0.92
UBXN11-215ENST00000494942 ROCK1Q13464 1354 aa20.81■□□□□ 0.92
UBXN11-215ENST00000494942 MPHOSPH9Q99550 1183 aa20.81■□□□□ 0.92
UBXN11-215ENST00000494942 GRIN2AQ12879 1464 aa20.8■□□□□ 0.92
UBXN11-215ENST00000494942 KIAA0586Q9BVV6 1533 aa20.79■□□□□ 0.92
UBXN11-215ENST00000494942 KIAA0556O60303 1618 aa20.77■□□□□ 0.92
UBXN11-215ENST00000494942 HSPA5P11021 654 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms