RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 RRBP1Q9P2E9 1410 aaKnown RBP22.07■■□□□ 1.12
CACUL1-206ENST00000493518 PEG3Q9GZU2 1588 aa22.07■■□□□ 1.12
CACUL1-206ENST00000493518 PHLDB1Q86UU1 1377 aa22.07■■□□□ 1.12
CACUL1-206ENST00000493518 CHIC2Q9UKJ5 165 aa22.03■■□□□ 1.12
CACUL1-206ENST00000493518 CARMIL1Q5VZK9 1371 aa22.03■■□□□ 1.12
CACUL1-206ENST00000493518 SETD5Q9C0A6 1442 aa22.02■■□□□ 1.12
CACUL1-206ENST00000493518 SENP3-EIF4A1A0A087X0R7 540 aa22.01■■□□□ 1.11
CACUL1-206ENST00000493518 IGF1RP08069 1367 aa22■■□□□ 1.11
CACUL1-206ENST00000493518 WDR97A6NE52 1622 aa21.97■■□□□ 1.11
CACUL1-206ENST00000493518 HNRNPUQ00839 825 aaKnown RBP eCLIP21.96■■□□□ 1.11
CACUL1-206ENST00000493518 ERICH3Q5RHP9 1530 aa21.95■■□□□ 1.11
CACUL1-206ENST00000493518 FHOD3Q2V2M9 1422 aa21.95■■□□□ 1.1
CACUL1-206ENST00000493518 ANP32EQ9BTT0 268 aa21.93■■□□□ 1.1
CACUL1-206ENST00000493518 TONSLQ96HA7 1378 aa21.93■■□□□ 1.1
CACUL1-206ENST00000493518 RRP7BPQ9NSQ0 103 aa21.93■■□□□ 1.1
CACUL1-206ENST00000493518 PPP1R15AO75807 674 aaPredicted RBP21.92■■□□□ 1.1
CACUL1-206ENST00000493518 MAPKBP1O60336 1514 aa21.91■■□□□ 1.1
CACUL1-206ENST00000493518 POLR3GLQ9BT43 218 aa21.89■■□□□ 1.1
CACUL1-206ENST00000493518 RBM19Q9Y4C8 960 aaKnown RBP21.87■■□□□ 1.09
CACUL1-206ENST00000493518 FOXD1Q16676 465 aa21.85■■□□□ 1.09
CACUL1-206ENST00000493518 BIVM-ERCC5R4GMW8 1640 aa21.84■■□□□ 1.09
CACUL1-206ENST00000493518 LRRC9Q6ZRR7 1453 aa21.83■■□□□ 1.09
CACUL1-206ENST00000493518 FAM9BQ8IZU0 186 aa21.81■■□□□ 1.08
CACUL1-206ENST00000493518 MTUS2Q5JR59 1369 aa21.8■■□□□ 1.08
CACUL1-206ENST00000493518 FGD5Q6ZNL6 1462 aa21.79■■□□□ 1.08
CACUL1-206ENST00000493518 CFTRP13569 1480 aa21.79■■□□□ 1.08
CACUL1-206ENST00000493518 RAD54L2Q9Y4B4 1467 aa21.78■■□□□ 1.08
CACUL1-206ENST00000493518 NCAPD3P42695 1498 aa21.78■■□□□ 1.08
CACUL1-206ENST00000493518 TIAM1Q13009 1591 aa21.76■■□□□ 1.07
CACUL1-206ENST00000493518 ZNF326Q5BKZ1 582 aaKnown RBP21.72■■□□□ 1.07
CACUL1-206ENST00000493518 CCDC184Q52MB2 194 aa21.71■■□□□ 1.07
CACUL1-206ENST00000493518 CADPSQ9ULU8 1353 aa21.71■■□□□ 1.07
CACUL1-206ENST00000493518 ERICH6Q7L0X2 663 aa21.7■■□□□ 1.06
CACUL1-206ENST00000493518 FHAD1B1AJZ9 1412 aa21.7■■□□□ 1.06
CACUL1-206ENST00000493518 TDRD9Q8NDG6 1382 aaKnown RBP21.68■■□□□ 1.06
CACUL1-206ENST00000493518 HSPA5P11021 654 aaKnown RBP21.68■■□□□ 1.06
CACUL1-206ENST00000493518 CCER2I3L3R5 266 aa21.66■■□□□ 1.06
CACUL1-206ENST00000493518 PCF11O94913 1555 aaKnown RBP21.64■■□□□ 1.05
CACUL1-206ENST00000493518 B4GALNT3Q6L9W6 998 aa21.62■■□□□ 1.05
CACUL1-206ENST00000493518 CDK11AQ9UQ88 783 aaPredicted RBP21.62■■□□□ 1.05
CACUL1-206ENST00000493518 PTPRKQ15262 1439 aa21.6■■□□□ 1.05
CACUL1-206ENST00000493518 MRS2Q9HD23 443 aa21.59■■□□□ 1.05
CACUL1-206ENST00000493518 CCDC18Q5T9S5 1454 aa21.59■■□□□ 1.05
CACUL1-206ENST00000493518 MSH5O43196 834 aa21.57■■□□□ 1.04
CACUL1-206ENST00000493518 WASHC2AQ641Q2 1341 aa21.57■■□□□ 1.04
CACUL1-206ENST00000493518 BCL11AQ9H165 835 aa21.57■■□□□ 1.04
CACUL1-206ENST00000493518 NESP48681 1621 aa21.56■■□□□ 1.04
CACUL1-206ENST00000493518 HMGXB3Q12766 1538 aa21.56■■□□□ 1.04
CACUL1-206ENST00000493518 FGD6Q6ZV73 1430 aa21.56■■□□□ 1.04
CACUL1-206ENST00000493518 TIMELESSQ9UNS1 1208 aa21.55■■□□□ 1.04
CACUL1-206ENST00000493518 EIF4G2P78344 907 aaKnown RBP eCLIP21.55■■□□□ 1.04
CACUL1-206ENST00000493518 L3MBTL2Q969R5 705 aa21.54■■□□□ 1.04
CACUL1-206ENST00000493518 C11orf95C9JLR9 678 aaPredicted RBP21.54■■□□□ 1.04
CACUL1-206ENST00000493518 DNAJC5BQ9UF47 199 aa21.54■■□□□ 1.04
CACUL1-206ENST00000493518 AQRO60306 1485 aaKnown RBP eCLIP21.54■■□□□ 1.04
CACUL1-206ENST00000493518 FANCD2Q9BXW9 1451 aa21.54■■□□□ 1.04
CACUL1-206ENST00000493518 ZNF777Q9ULD5 760 aaPredicted RBP21.49■■□□□ 1.03
CACUL1-206ENST00000493518 SALL2Q9Y467 1007 aaPredicted RBP21.48■■□□□ 1.03
CACUL1-206ENST00000493518 MPHOSPH9Q99550 1183 aa21.46■■□□□ 1.03
CACUL1-206ENST00000493518 CASKIN1Q8WXD9 1431 aa21.44■■□□□ 1.02
CACUL1-206ENST00000493518 SLC4A1APQ9BWU0 796 aaKnown RBP21.42■■□□□ 1.02
CACUL1-206ENST00000493518 UACAQ9BZF9 1416 aa21.42■■□□□ 1.02
CACUL1-206ENST00000493518 ZNF644Q9H582 1327 aaPredicted RBP21.42■■□□□ 1.02
CACUL1-206ENST00000493518 POLA1P09884 1462 aaPredicted RBP21.41■■□□□ 1.02
CACUL1-206ENST00000493518 NBR1Q14596 966 aa21.41■■□□□ 1.02
CACUL1-206ENST00000493518 NAIPQ13075 1403 aa21.41■■□□□ 1.02
CACUL1-206ENST00000493518 FMN1Q68DA7 1419 aa21.4■■□□□ 1.02
CACUL1-206ENST00000493518 NCOA2Q15596 1464 aa21.4■■□□□ 1.02
CACUL1-206ENST00000493518 NBPF8Q3BBV2 869 aa21.39■■□□□ 1.01
CACUL1-206ENST00000493518 FYCO1Q9BQS8 1478 aa21.38■■□□□ 1.01
CACUL1-206ENST00000493518 MAP3K1Q13233 1512 aa21.37■■□□□ 1.01
CACUL1-206ENST00000493518 PRKRIP1Q9H875 184 aaPredicted RBP21.37■■□□□ 1.01
CACUL1-206ENST00000493518 HFM1A2PYH4 1435 aa21.36■■□□□ 1.01
CACUL1-206ENST00000493518 MYOM3Q5VTT5 1437 aa21.34■■□□□ 1.01
CACUL1-206ENST00000493518 KDM2AQ9Y2K7 1162 aa21.34■■□□□ 1.01
CACUL1-206ENST00000493518 PPP4R2Q9NY27 417 aa21.33■■□□□ 1
CACUL1-206ENST00000493518 TOPBP1Q92547 1522 aa21.32■■□□□ 1
CACUL1-206ENST00000493518 FBLN2P98095 1184 aa21.32■■□□□ 1
CACUL1-206ENST00000493518 PTPN23Q9H3S7 1636 aa21.27■■□□□ 1
CACUL1-206ENST00000493518 CFAP43Q8NDM7 1665 aa21.26■□□□□ 0.99
CACUL1-206ENST00000493518 NPM2Q86SE8 214 aaKnown RBP21.26■□□□□ 0.99
CACUL1-206ENST00000493518 KIF7Q2M1P5 1343 aa21.25■□□□□ 0.99
CACUL1-206ENST00000493518 CC2D2AQ9P2K1 1620 aa21.24■□□□□ 0.99
CACUL1-206ENST00000493518 CCDC136Q96JN2 1154 aa21.24■□□□□ 0.99
CACUL1-206ENST00000493518 CCDC7Q96M83 1385 aa21.23■□□□□ 0.99
CACUL1-206ENST00000493518 ABCA10Q8WWZ4 1543 aa21.22■□□□□ 0.99
CACUL1-206ENST00000493518 SNAPC4Q5SXM2 1469 aa21.22■□□□□ 0.99
CACUL1-206ENST00000493518 GAPVD1Q14C86 1478 aa21.2■□□□□ 0.98
CACUL1-206ENST00000493518 AKNAQ7Z591 1439 aa21.19■□□□□ 0.98
CACUL1-206ENST00000493518 CDK13Q14004 1512 aaKnown RBP21.19■□□□□ 0.98
CACUL1-206ENST00000493518 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.19■□□□□ 0.98
CACUL1-206ENST00000493518 CNTLNQ9NXG0 1405 aa21.19■□□□□ 0.98
CACUL1-206ENST00000493518 TMC1Q8TDI8 760 aa21.18■□□□□ 0.98
CACUL1-206ENST00000493518 PAK3O75914 559 aaPredicted RBP21.17■□□□□ 0.98
CACUL1-206ENST00000493518 EFCAB5A4FU69 1503 aa21.16■□□□□ 0.98
CACUL1-206ENST00000493518 KDM6BO15054 1643 aa21.16■□□□□ 0.98
CACUL1-206ENST00000493518 DNMBPQ6XZF7 1577 aa21.15■□□□□ 0.98
CACUL1-206ENST00000493518 PKD2Q13563 968 aa21.14■□□□□ 0.97
CACUL1-206ENST00000493518 MAGI3Q5TCQ9 1506 aa21.14■□□□□ 0.97
CACUL1-206ENST00000493518 CFDP1Q9UEE9 299 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms