RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 SNAPC4Q5SXM2 1469 aa24.25■■□□□ 1.47
COPS7B-222ENST00000492423 MAGI1Q96QZ7 1491 aaPredicted RBP24.21■■□□□ 1.47
COPS7B-222ENST00000492423 FHAD1B1AJZ9 1412 aa24.2■■□□□ 1.46
COPS7B-222ENST00000492423 TNIKQ9UKE5 1360 aa24.18■■□□□ 1.46
COPS7B-222ENST00000492423 CTTNBP2Q8WZ74 1663 aa24.18■■□□□ 1.46
COPS7B-222ENST00000492423 SYNJ2O15056 1496 aa24.11■■□□□ 1.45
COPS7B-222ENST00000492423 UBTFP17480 764 aaKnown RBP24.1■■□□□ 1.45
COPS7B-222ENST00000492423 CHD1O14646 1710 aa24.09■■□□□ 1.45
COPS7B-222ENST00000492423 GRIN2AQ12879 1464 aa24.07■■□□□ 1.44
COPS7B-222ENST00000492423 CEP162Q5TB80 1403 aa24.03■■□□□ 1.44
COPS7B-222ENST00000492423 CEP170Q5SW79 1584 aa23.99■■□□□ 1.43
COPS7B-222ENST00000492423 NUP160Q12769 1436 aa23.93■■□□□ 1.42
COPS7B-222ENST00000492423 IQGAP2Q13576 1575 aa23.93■■□□□ 1.42
COPS7B-222ENST00000492423 CLIP1P30622 1438 aa23.93■■□□□ 1.42
COPS7B-222ENST00000492423 CHMP7Q8WUX9 453 aaPredicted RBP23.91■■□□□ 1.42
COPS7B-222ENST00000492423 KIAA0586Q9BVV6 1533 aa23.87■■□□□ 1.41
COPS7B-222ENST00000492423 ARHGAP35Q9NRY4 1499 aa23.86■■□□□ 1.41
COPS7B-222ENST00000492423 FBLN2P98095 1184 aa23.85■■□□□ 1.41
COPS7B-222ENST00000492423 SAMD9Q5K651 1589 aa23.85■■□□□ 1.41
COPS7B-222ENST00000492423 EFCAB5A4FU69 1503 aa23.84■■□□□ 1.41
COPS7B-222ENST00000492423 ARAP1Q96P48 1450 aa23.82■■□□□ 1.4
COPS7B-222ENST00000492423 UGGT2Q9NYU1 1516 aa23.81■■□□□ 1.4
COPS7B-222ENST00000492423 RANGAP1P46060 587 aaPredicted RBP23.78■■□□□ 1.4
COPS7B-222ENST00000492423 CLASP1Q7Z460 1538 aa23.77■■□□□ 1.4
COPS7B-222ENST00000492423 SHROOM2Q13796 1616 aa23.74■■□□□ 1.39
COPS7B-222ENST00000492423 KIAA0556O60303 1618 aa23.72■■□□□ 1.39
COPS7B-222ENST00000492423 VPS8Q8N3P4 1428 aa23.69■■□□□ 1.38
COPS7B-222ENST00000492423 DISP1Q96F81 1524 aa23.69■■□□□ 1.38
COPS7B-222ENST00000492423 FHOD3Q2V2M9 1422 aa23.67■■□□□ 1.38
COPS7B-222ENST00000492423 OSCARQ8IYS5 282 aa23.61■■□□□ 1.37
COPS7B-222ENST00000492423 PCF11O94913 1555 aaKnown RBP23.6■■□□□ 1.37
COPS7B-222ENST00000492423 P3H3Q8IVL6 736 aa23.59■■□□□ 1.37
COPS7B-222ENST00000492423 JPH4Q96JJ6 628 aa23.58■■□□□ 1.37
COPS7B-222ENST00000492423 ERCC6L2Q5T890 1561 aa23.54■■□□□ 1.36
COPS7B-222ENST00000492423 PRG4Q92954 1404 aaPredicted RBP23.54■■□□□ 1.36
COPS7B-222ENST00000492423 CARMIL2Q6F5E8 1435 aa23.53■■□□□ 1.36
COPS7B-222ENST00000492423 FMN1Q68DA7 1419 aa23.52■■□□□ 1.36
COPS7B-222ENST00000492423 LRRIQ1Q96JM4 1722 aa23.5■■□□□ 1.35
COPS7B-222ENST00000492423 FYCO1Q9BQS8 1478 aa23.49■■□□□ 1.35
COPS7B-222ENST00000492423 CASKIN1Q8WXD9 1431 aa23.47■■□□□ 1.35
COPS7B-222ENST00000492423 CFAP43Q8NDM7 1665 aa23.47■■□□□ 1.35
COPS7B-222ENST00000492423 HECW1Q76N89 1606 aa23.44■■□□□ 1.34
COPS7B-222ENST00000492423 RAPGEF6Q8TEU7 1601 aa23.44■■□□□ 1.34
COPS7B-222ENST00000492423 TIAM1Q13009 1591 aa23.4■■□□□ 1.34
COPS7B-222ENST00000492423 ABCA8O94911 1581 aa23.4■■□□□ 1.34
COPS7B-222ENST00000492423 MAP3K1Q13233 1512 aa23.38■■□□□ 1.33
COPS7B-222ENST00000492423 PLB1Q6P1J6 1458 aa23.35■■□□□ 1.33
COPS7B-222ENST00000492423 PTPRGP23470 1445 aa23.33■■□□□ 1.32
COPS7B-222ENST00000492423 NUP153P49790 1475 aaKnown RBP23.32■■□□□ 1.32
COPS7B-222ENST00000492423 TTBK1Q5TCY1 1321 aaPredicted RBP23.3■■□□□ 1.32
COPS7B-222ENST00000492423 EPRSP07814 1512 aaKnown RBP23.29■■□□□ 1.32
COPS7B-222ENST00000492423 CCDC18Q5T9S5 1454 aa23.29■■□□□ 1.32
COPS7B-222ENST00000492423 CDK13Q14004 1512 aaKnown RBP23.27■■□□□ 1.32
COPS7B-222ENST00000492423 RIMBP3CA6NJZ7 1639 aa23.26■■□□□ 1.31
COPS7B-222ENST00000492423 RIMBP3BA6NNM3 1639 aa23.26■■□□□ 1.31
COPS7B-222ENST00000492423 RIMBP3Q9UFD9 1639 aa23.26■■□□□ 1.31
COPS7B-222ENST00000492423 APLP2Q06481 763 aa23.26■■□□□ 1.31
COPS7B-222ENST00000492423 ARHGEF11O15085 1522 aa23.25■■□□□ 1.31
COPS7B-222ENST00000492423 PPARGC1BQ86YN6 1023 aaKnown RBP23.25■■□□□ 1.31
COPS7B-222ENST00000492423 ABCC2Q92887 1545 aa23.24■■□□□ 1.31
COPS7B-222ENST00000492423 ATP1B4Q9UN42 357 aaPredicted RBP23.23■■□□□ 1.31
COPS7B-222ENST00000492423 UACAQ9BZF9 1416 aa23.23■■□□□ 1.31
COPS7B-222ENST00000492423 LRRC9Q6ZRR7 1453 aa23.23■■□□□ 1.31
COPS7B-222ENST00000492423 KANK4Q5T7N3 995 aaPredicted RBP23.21■■□□□ 1.31
COPS7B-222ENST00000492423 MAGI3Q5TCQ9 1506 aa23.21■■□□□ 1.31
COPS7B-222ENST00000492423 UHRF1BP1LA0JNW5 1464 aa23.19■■□□□ 1.3
COPS7B-222ENST00000492423 EHBP1L1Q8N3D4 1523 aa23.18■■□□□ 1.3
COPS7B-222ENST00000492423 ADCY10Q96PN6 1610 aa23.18■■□□□ 1.3
COPS7B-222ENST00000492423 ATP10BO94823 1461 aa23.14■■□□□ 1.29
COPS7B-222ENST00000492423 ZCCHC11Q5TAX3 1644 aaKnown RBP23.13■■□□□ 1.29
COPS7B-222ENST00000492423 SUPT6HQ7KZ85 1726 aaKnown RBP23.11■■□□□ 1.29
COPS7B-222ENST00000492423 ARID3CA6NKF2 412 aa23.1■■□□□ 1.29
COPS7B-222ENST00000492423 KDM5BQ9UGL1 1544 aa23.09■■□□□ 1.29
COPS7B-222ENST00000492423 MTUS2Q5JR59 1369 aa23.07■■□□□ 1.28
COPS7B-222ENST00000492423 TROQ12816 1431 aaPredicted RBP23.03■■□□□ 1.28
COPS7B-222ENST00000492423 KIF14Q15058 1648 aa23.02■■□□□ 1.28
COPS7B-222ENST00000492423 NCOA2Q15596 1464 aa23.01■■□□□ 1.27
COPS7B-222ENST00000492423 CYB5RLQ6IPT4 315 aa23■■□□□ 1.27
COPS7B-222ENST00000492423 TRIM26Q12899 539 aaPredicted RBP22.98■■□□□ 1.27
COPS7B-222ENST00000492423 PHLDB1Q86UU1 1377 aa22.98■■□□□ 1.27
COPS7B-222ENST00000492423 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.97■■□□□ 1.27
COPS7B-222ENST00000492423 HNRNPUL2Q1KMD3 747 aaKnown RBP22.97■■□□□ 1.27
COPS7B-222ENST00000492423 CDK11AQ9UQ88 783 aaPredicted RBP22.95■■□□□ 1.26
COPS7B-222ENST00000492423 RRBP1Q9P2E9 1410 aaKnown RBP22.94■■□□□ 1.26
COPS7B-222ENST00000492423 ABCC10Q5T3U5 1492 aa22.91■■□□□ 1.26
COPS7B-222ENST00000492423 CDC42BPAQ5VT25 1732 aa22.91■■□□□ 1.26
COPS7B-222ENST00000492423 ITSN2Q9NZM3 1697 aa22.9■■□□□ 1.26
COPS7B-222ENST00000492423 MAPK8IP2Q13387 824 aaPredicted RBP22.9■■□□□ 1.26
COPS7B-222ENST00000492423 PLEKHD1A6NEE1 506 aa22.89■■□□□ 1.25
COPS7B-222ENST00000492423 MYOM3Q5VTT5 1437 aa22.89■■□□□ 1.25
COPS7B-222ENST00000492423 WDR7Q9Y4E6 1490 aa22.86■■□□□ 1.25
COPS7B-222ENST00000492423 TTC37Q6PGP7 1564 aa22.86■■□□□ 1.25
COPS7B-222ENST00000492423 FGD6Q6ZV73 1430 aa22.85■■□□□ 1.25
COPS7B-222ENST00000492423 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.84■■□□□ 1.25
COPS7B-222ENST00000492423 PCGF6Q9BYE7 350 aa22.84■■□□□ 1.25
COPS7B-222ENST00000492423 PTPN23Q9H3S7 1636 aa22.83■■□□□ 1.25
COPS7B-222ENST00000492423 ASXL2Q76L83 1435 aa22.82■■□□□ 1.24
COPS7B-222ENST00000492423 PREX2Q70Z35 1606 aa22.82■■□□□ 1.24
COPS7B-222ENST00000492423 MYO5CQ9NQX4 1742 aa22.82■■□□□ 1.24
COPS7B-222ENST00000492423 CCNB3Q8WWL7 1395 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms