RNA–Protein interactions for RNA: ENST00000492058.1

NCKAP1-206, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 642 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-206ENST00000492058 CCDC88BA6NC98 1476 aa17.25■□□□□ 0.35
NCKAP1-206ENST00000492058 EIF4G3O43432 1585 aaKnown RBP17.25■□□□□ 0.35
NCKAP1-206ENST00000492058 CHD1O14646 1710 aa17.21■□□□□ 0.35
NCKAP1-206ENST00000492058 SLC4A1APQ9BWU0 796 aaKnown RBP17.2■□□□□ 0.34
NCKAP1-206ENST00000492058 ABCC8Q09428 1581 aa17.19■□□□□ 0.34
NCKAP1-206ENST00000492058 PRDM2Q13029 1718 aa17.19■□□□□ 0.34
NCKAP1-206ENST00000492058 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
NCKAP1-206ENST00000492058 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
NCKAP1-206ENST00000492058 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
NCKAP1-206ENST00000492058 FOXD4L1Q9NU39 408 aa17.14■□□□□ 0.33
NCKAP1-206ENST00000492058 TARBP1Q13395 1621 aaKnown RBP17.12■□□□□ 0.33
NCKAP1-206ENST00000492058 CHRDL2Q6WN34 429 aa17.12■□□□□ 0.33
NCKAP1-206ENST00000492058 RAD54L2Q9Y4B4 1467 aa17.12■□□□□ 0.33
NCKAP1-206ENST00000492058 ZBTB12Q9Y330 459 aaPredicted RBP17.09■□□□□ 0.33
NCKAP1-206ENST00000492058 SOGA1O94964 1423 aa17.09■□□□□ 0.33
NCKAP1-206ENST00000492058 POLA1P09884 1462 aaPredicted RBP17.09■□□□□ 0.33
NCKAP1-206ENST00000492058 SNAPC4Q5SXM2 1469 aa17.05■□□□□ 0.32
NCKAP1-206ENST00000492058 CLASP1Q7Z460 1538 aa16.98■□□□□ 0.31
NCKAP1-206ENST00000492058 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
NCKAP1-206ENST00000492058 AKT1S1Q96B36 256 aa16.96■□□□□ 0.31
NCKAP1-206ENST00000492058 ATF5Q9Y2D1 282 aaPredicted RBP16.95■□□□□ 0.3
NCKAP1-206ENST00000492058 FGD5Q6ZNL6 1462 aa16.94■□□□□ 0.3
NCKAP1-206ENST00000492058 GAPVD1Q14C86 1478 aa16.93■□□□□ 0.3
NCKAP1-206ENST00000492058 GRIN2BQ13224 1484 aa16.93■□□□□ 0.3
NCKAP1-206ENST00000492058 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
NCKAP1-206ENST00000492058 SYNJ2O15056 1496 aa16.91■□□□□ 0.3
NCKAP1-206ENST00000492058 CUX1P39880 1505 aa16.84■□□□□ 0.29
NCKAP1-206ENST00000492058 WDR97A6NE52 1622 aa16.81■□□□□ 0.28
NCKAP1-206ENST00000492058 ERCC6L2Q5T890 1561 aa16.78■□□□□ 0.28
NCKAP1-206ENST00000492058 REM2Q8IYK8 340 aaPredicted RBP16.76■□□□□ 0.27
NCKAP1-206ENST00000492058 PBRM1Q86U86 1689 aa16.73■□□□□ 0.27
NCKAP1-206ENST00000492058 GRIN2AQ12879 1464 aa16.69■□□□□ 0.26
NCKAP1-206ENST00000492058 FAM69CQ0P6D2 419 aa16.69■□□□□ 0.26
NCKAP1-206ENST00000492058 ATXN8OSP0DMR3 200 aa16.68■□□□□ 0.26
NCKAP1-206ENST00000492058 CEP170Q5SW79 1584 aa16.68■□□□□ 0.26
NCKAP1-206ENST00000492058 ABCA10Q8WWZ4 1543 aa16.67■□□□□ 0.26
NCKAP1-206ENST00000492058 NPM1P06748 294 aaKnown RBP eCLIP16.65■□□□□ 0.26
NCKAP1-206ENST00000492058 ABCA5Q8WWZ7 1642 aa16.64■□□□□ 0.25
NCKAP1-206ENST00000492058 ZBTB22O15209 634 aa16.64■□□□□ 0.25
NCKAP1-206ENST00000492058 SP7Q8TDD2 431 aaPredicted RBP16.62■□□□□ 0.25
NCKAP1-206ENST00000492058 NUP160Q12769 1436 aa16.62■□□□□ 0.25
NCKAP1-206ENST00000492058 PRG4Q92954 1404 aaPredicted RBP16.62■□□□□ 0.25
NCKAP1-206ENST00000492058 PIP4P2Q8N4L2 257 aa16.61■□□□□ 0.25
NCKAP1-206ENST00000492058 JPH4Q96JJ6 628 aa16.61■□□□□ 0.25
NCKAP1-206ENST00000492058 ILDR1Q86SU0 546 aaPredicted RBP16.6■□□□□ 0.25
NCKAP1-206ENST00000492058 WRNQ14191 1432 aaPredicted RBP eCLIP16.6■□□□□ 0.25
NCKAP1-206ENST00000492058 KDM4FA0A1W2PPD8 638 aa16.59■□□□□ 0.25
NCKAP1-206ENST00000492058 FHAD1B1AJZ9 1412 aa16.58■□□□□ 0.24
NCKAP1-206ENST00000492058 KIF13AQ9H1H9 1805 aa16.57■□□□□ 0.24
NCKAP1-206ENST00000492058 ADAMTS12P58397 1594 aa16.56■□□□□ 0.24
NCKAP1-206ENST00000492058 PITPNM1O00562 1244 aa16.56■□□□□ 0.24
NCKAP1-206ENST00000492058 SUPT5HO00267 1087 aaKnown RBP16.54■□□□□ 0.24
NCKAP1-206ENST00000492058 SHROOM2Q13796 1616 aa16.54■□□□□ 0.24
NCKAP1-206ENST00000492058 ABCC10Q5T3U5 1492 aa16.52■□□□□ 0.23
NCKAP1-206ENST00000492058 TTBK1Q5TCY1 1321 aaPredicted RBP16.49■□□□□ 0.23
NCKAP1-206ENST00000492058 HAX1O00165 279 aa16.48■□□□□ 0.23
NCKAP1-206ENST00000492058 SPDYE2BA6NHP3 402 aa16.47■□□□□ 0.23
NCKAP1-206ENST00000492058 SPDYE6P0CI01 402 aa16.47■□□□□ 0.23
NCKAP1-206ENST00000492058 FXR2P51116 673 aaKnown RBP eCLIP16.47■□□□□ 0.233e-9■□□□□ 9.2
NCKAP1-206ENST00000492058 SPDYE2Q495Y8 402 aa16.47■□□□□ 0.23
NCKAP1-206ENST00000492058 KDM6BO15054 1643 aa16.44■□□□□ 0.22
NCKAP1-206ENST00000492058 ERICH3Q5RHP9 1530 aa16.44■□□□□ 0.22
NCKAP1-206ENST00000492058 DIP2BQ9P265 1576 aa16.41■□□□□ 0.22
NCKAP1-206ENST00000492058 MAPKBP1O60336 1514 aa16.4■□□□□ 0.22
NCKAP1-206ENST00000492058 TSPOAP1O95153 1857 aa16.4■□□□□ 0.22
NCKAP1-206ENST00000492058 TOP2BQ02880 1626 aa16.4■□□□□ 0.22
NCKAP1-206ENST00000492058 ADCY10Q96PN6 1610 aa16.37■□□□□ 0.21
NCKAP1-206ENST00000492058 BIVM-ERCC5R4GMW8 1640 aa16.36■□□□□ 0.21
NCKAP1-206ENST00000492058 RUSC2Q8N2Y8 1516 aa16.33■□□□□ 0.2
NCKAP1-206ENST00000492058 PTPRGP23470 1445 aa16.31■□□□□ 0.2
NCKAP1-206ENST00000492058 SPDYE1Q8NFV5 336 aaPredicted RBP16.28■□□□□ 0.2
NCKAP1-206ENST00000492058 KIAA0586Q9BVV6 1533 aa16.28■□□□□ 0.2
NCKAP1-206ENST00000492058 ADGRL1O94910 1474 aa16.28■□□□□ 0.2
NCKAP1-206ENST00000492058 CLEC11AQ9Y240 323 aa16.26■□□□□ 0.19
NCKAP1-206ENST00000492058 IGF1RP08069 1367 aa16.25■□□□□ 0.19
NCKAP1-206ENST00000492058 ZNF692Q9BU19 519 aaPredicted RBP16.24■□□□□ 0.19
NCKAP1-206ENST00000492058 ASXL2Q76L83 1435 aa16.23■□□□□ 0.19
NCKAP1-206ENST00000492058 TNIKQ9UKE5 1360 aa16.2■□□□□ 0.18
NCKAP1-206ENST00000492058 PLB1Q6P1J6 1458 aa16.19■□□□□ 0.18
NCKAP1-206ENST00000492058 ABCC2Q92887 1545 aa16.19■□□□□ 0.18
NCKAP1-206ENST00000492058 CARMIL2Q6F5E8 1435 aa16.19■□□□□ 0.18
NCKAP1-206ENST00000492058 PRKAR2AP13861 404 aaKnown RBP16.18■□□□□ 0.18
NCKAP1-206ENST00000492058 MKRN4PQ13434 485 aaPredicted RBP16.18■□□□□ 0.18
NCKAP1-206ENST00000492058 COL17A1Q9UMD9 1497 aaPredicted RBP16.17■□□□□ 0.18
NCKAP1-206ENST00000492058 HECW2Q9P2P5 1572 aa16.17■□□□□ 0.18
NCKAP1-206ENST00000492058 KIF27Q86VH2 1401 aa16.16■□□□□ 0.18
NCKAP1-206ENST00000492058 SSUH2Q9Y2M2 353 aa16.14■□□□□ 0.17
NCKAP1-206ENST00000492058 CARMIL1Q5VZK9 1371 aa16.13■□□□□ 0.17
NCKAP1-206ENST00000492058 PPRC1Q5VV67 1664 aaKnown RBP16.12■□□□□ 0.17
NCKAP1-206ENST00000492058 GLI2P10070 1586 aa16.12■□□□□ 0.17
NCKAP1-206ENST00000492058 UACAQ9BZF9 1416 aa16.11■□□□□ 0.17
NCKAP1-206ENST00000492058 CUL7Q14999 1698 aa16.09■□□□□ 0.17
NCKAP1-206ENST00000492058 KCNH8Q96L42 1107 aa16.09■□□□□ 0.17
NCKAP1-206ENST00000492058 EPRSP07814 1512 aaKnown RBP16.09■□□□□ 0.17
NCKAP1-206ENST00000492058 EVX2Q03828 476 aa16.08■□□□□ 0.16
NCKAP1-206ENST00000492058 UHRF1BP1LA0JNW5 1464 aa16.07■□□□□ 0.16
NCKAP1-206ENST00000492058 TEX14Q8IWB6 1497 aa16.07■□□□□ 0.16
NCKAP1-206ENST00000492058 FBXO41Q8TF61 875 aa16.06■□□□□ 0.16
NCKAP1-206ENST00000492058 IQGAP2Q13576 1575 aa16.03■□□□□ 0.16
NCKAP1-206ENST00000492058 MAP3K4Q9Y6R4 1608 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms