RNA–Protein interactions for RNA: ENST00000491490.5

RHBDD1-213, Transcript of rhomboid domain containing 1, humanhuman

TSL 1 (best)

Gene RHBDD1, Length 801 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-213ENST00000491490 IGF1RP08069 1367 aa12.64□□□□□ -0.39
RHBDD1-213ENST00000491490 RAPGEF2Q9Y4G8 1499 aa12.63□□□□□ -0.39
RHBDD1-213ENST00000491490 GOLGA3Q08378 1498 aa12.61□□□□□ -0.39
RHBDD1-213ENST00000491490 CARMIL1Q5VZK9 1371 aa12.61□□□□□ -0.39
RHBDD1-213ENST00000491490 FBLN2P98095 1184 aa12.6□□□□□ -0.39
RHBDD1-213ENST00000491490 PRXQ9BXM0 1461 aa12.59□□□□□ -0.39
RHBDD1-213ENST00000491490 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
RHBDD1-213ENST00000491490 UBTFP17480 764 aaKnown RBP12.58□□□□□ -0.4
RHBDD1-213ENST00000491490 RANGAP1P46060 587 aaPredicted RBP12.58□□□□□ -0.4
RHBDD1-213ENST00000491490 MAGI1Q96QZ7 1491 aaPredicted RBP12.58□□□□□ -0.4
RHBDD1-213ENST00000491490 FHAD1B1AJZ9 1412 aa12.57□□□□□ -0.4
RHBDD1-213ENST00000491490 CHD1O14646 1710 aa12.57□□□□□ -0.4
RHBDD1-213ENST00000491490 NCBP3Q53F19 620 aaKnown RBP12.56□□□□□ -0.4
RHBDD1-213ENST00000491490 SYNJ2O15056 1496 aa12.54□□□□□ -0.4
RHBDD1-213ENST00000491490 GRIN2AQ12879 1464 aa12.53□□□□□ -0.4
RHBDD1-213ENST00000491490 CHMP7Q8WUX9 453 aaPredicted RBP12.53□□□□□ -0.4
RHBDD1-213ENST00000491490 CTTNBP2Q8WZ74 1663 aa12.52□□□□□ -0.4
RHBDD1-213ENST00000491490 HOXD11P31277 338 aaPredicted RBP12.52□□□□□ -0.41
RHBDD1-213ENST00000491490 RNF216Q9NWF9 866 aaPredicted RBP12.5□□□□□ -0.41
RHBDD1-213ENST00000491490 CEP170Q5SW79 1584 aa12.48□□□□□ -0.41
RHBDD1-213ENST00000491490 CEP162Q5TB80 1403 aa12.45□□□□□ -0.42
RHBDD1-213ENST00000491490 TNIKQ9UKE5 1360 aa12.44□□□□□ -0.42
RHBDD1-213ENST00000491490 IQGAP2Q13576 1575 aa12.43□□□□□ -0.42
RHBDD1-213ENST00000491490 CLIP1P30622 1438 aa12.4□□□□□ -0.42
RHBDD1-213ENST00000491490 NUP160Q12769 1436 aa12.4□□□□□ -0.42
RHBDD1-213ENST00000491490 NPM3O75607 178 aaKnown RBP12.39□□□□□ -0.43
RHBDD1-213ENST00000491490 P3H3Q8IVL6 736 aa12.38□□□□□ -0.43
RHBDD1-213ENST00000491490 KIAA0586Q9BVV6 1533 aa12.37□□□□□ -0.43
RHBDD1-213ENST00000491490 KCNA4P22459 653 aa12.37□□□□□ -0.43
RHBDD1-213ENST00000491490 TTBK1Q5TCY1 1321 aaPredicted RBP12.37□□□□□ -0.43
RHBDD1-213ENST00000491490 CLASP1Q7Z460 1538 aa12.35□□□□□ -0.43
RHBDD1-213ENST00000491490 ARHGAP35Q9NRY4 1499 aa12.34□□□□□ -0.43
RHBDD1-213ENST00000491490 FHOD3Q2V2M9 1422 aa12.34□□□□□ -0.43
RHBDD1-213ENST00000491490 SAMD9Q5K651 1589 aa12.33□□□□□ -0.44
RHBDD1-213ENST00000491490 ARAP1Q96P48 1450 aa12.33□□□□□ -0.44
RHBDD1-213ENST00000491490 EFCAB5A4FU69 1503 aa12.32□□□□□ -0.44
RHBDD1-213ENST00000491490 KIAA0556O60303 1618 aa12.32□□□□□ -0.44
RHBDD1-213ENST00000491490 UGGT2Q9NYU1 1516 aa12.32□□□□□ -0.44
RHBDD1-213ENST00000491490 OSCARQ8IYS5 282 aa12.3□□□□□ -0.44
RHBDD1-213ENST00000491490 ERCC6L2Q5T890 1561 aa12.3□□□□□ -0.44
RHBDD1-213ENST00000491490 DISP1Q96F81 1524 aa12.29□□□□□ -0.44
RHBDD1-213ENST00000491490 SHROOM2Q13796 1616 aa12.29□□□□□ -0.44
RHBDD1-213ENST00000491490 PRG4Q92954 1404 aaPredicted RBP12.28□□□□□ -0.44
RHBDD1-213ENST00000491490 JPH4Q96JJ6 628 aa12.28□□□□□ -0.44
RHBDD1-213ENST00000491490 CARMIL2Q6F5E8 1435 aa12.26□□□□□ -0.45
RHBDD1-213ENST00000491490 PCF11O94913 1555 aaKnown RBP12.26□□□□□ -0.45
RHBDD1-213ENST00000491490 ATP1B4Q9UN42 357 aaPredicted RBP12.25□□□□□ -0.45
RHBDD1-213ENST00000491490 VPS8Q8N3P4 1428 aa12.24□□□□□ -0.45
RHBDD1-213ENST00000491490 ARID3CA6NKF2 412 aa12.21□□□□□ -0.45
RHBDD1-213ENST00000491490 PPARGC1BQ86YN6 1023 aaKnown RBP12.19□□□□□ -0.46
RHBDD1-213ENST00000491490 FMN1Q68DA7 1419 aa12.19□□□□□ -0.46
RHBDD1-213ENST00000491490 ARHGEF11O15085 1522 aa12.17□□□□□ -0.46
RHBDD1-213ENST00000491490 PLB1Q6P1J6 1458 aa12.17□□□□□ -0.46
RHBDD1-213ENST00000491490 RAPGEF6Q8TEU7 1601 aa12.17□□□□□ -0.46
RHBDD1-213ENST00000491490 RIMBP3CA6NJZ7 1639 aa12.16□□□□□ -0.46
RHBDD1-213ENST00000491490 RIMBP3BA6NNM3 1639 aa12.16□□□□□ -0.46
RHBDD1-213ENST00000491490 HECW1Q76N89 1606 aa12.16□□□□□ -0.46
RHBDD1-213ENST00000491490 RIMBP3Q9UFD9 1639 aa12.16□□□□□ -0.46
RHBDD1-213ENST00000491490 PTPRGP23470 1445 aa12.16□□□□□ -0.46
RHBDD1-213ENST00000491490 FYCO1Q9BQS8 1478 aa12.15□□□□□ -0.46
RHBDD1-213ENST00000491490 LRRIQ1Q96JM4 1722 aa12.14□□□□□ -0.47
RHBDD1-213ENST00000491490 CASKIN1Q8WXD9 1431 aa12.13□□□□□ -0.47
RHBDD1-213ENST00000491490 CDK13Q14004 1512 aaKnown RBP12.13□□□□□ -0.47
RHBDD1-213ENST00000491490 APLP2Q06481 763 aa12.13□□□□□ -0.47
RHBDD1-213ENST00000491490 CFAP43Q8NDM7 1665 aa12.12□□□□□ -0.47
RHBDD1-213ENST00000491490 ABCA8O94911 1581 aa12.11□□□□□ -0.47
RHBDD1-213ENST00000491490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
RHBDD1-213ENST00000491490 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
RHBDD1-213ENST00000491490 TIAM1Q13009 1591 aa12.1□□□□□ -0.47
RHBDD1-213ENST00000491490 NUP153P49790 1475 aaKnown RBP12.1□□□□□ -0.47
RHBDD1-213ENST00000491490 UACAQ9BZF9 1416 aa12.09□□□□□ -0.47
RHBDD1-213ENST00000491490 ADCY10Q96PN6 1610 aa12.08□□□□□ -0.48
RHBDD1-213ENST00000491490 ABCC2Q92887 1545 aa12.08□□□□□ -0.48
RHBDD1-213ENST00000491490 EPRSP07814 1512 aaKnown RBP12.07□□□□□ -0.48
RHBDD1-213ENST00000491490 CACNB1Q02641 598 aaPredicted RBP12.07□□□□□ -0.48
RHBDD1-213ENST00000491490 RNF39Q9H2S5 420 aa12.06□□□□□ -0.48
RHBDD1-213ENST00000491490 CCDC18Q5T9S5 1454 aa12.06□□□□□ -0.48
RHBDD1-213ENST00000491490 ZCCHC11Q5TAX3 1644 aaKnown RBP12.05□□□□□ -0.48
RHBDD1-213ENST00000491490 CYB5RLQ6IPT4 315 aa12.05□□□□□ -0.48
RHBDD1-213ENST00000491490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.05□□□□□ -0.48
RHBDD1-213ENST00000491490 MAGI3Q5TCQ9 1506 aa12.03□□□□□ -0.48
RHBDD1-213ENST00000491490 KANK4Q5T7N3 995 aaPredicted RBP12.03□□□□□ -0.48
RHBDD1-213ENST00000491490 MTUS2Q5JR59 1369 aa12.02□□□□□ -0.49
RHBDD1-213ENST00000491490 LRRC9Q6ZRR7 1453 aa12.02□□□□□ -0.49
RHBDD1-213ENST00000491490 ATP10BO94823 1461 aa12.01□□□□□ -0.49
RHBDD1-213ENST00000491490 EHBP1L1Q8N3D4 1523 aa12.01□□□□□ -0.49
RHBDD1-213ENST00000491490 UHRF1BP1LA0JNW5 1464 aa12□□□□□ -0.49
RHBDD1-213ENST00000491490 MAP3K1Q13233 1512 aa11.99□□□□□ -0.49
RHBDD1-213ENST00000491490 KIF14Q15058 1648 aa11.98□□□□□ -0.49
RHBDD1-213ENST00000491490 SUPT6HQ7KZ85 1726 aaKnown RBP11.97□□□□□ -0.49
RHBDD1-213ENST00000491490 KDM5BQ9UGL1 1544 aa11.96□□□□□ -0.49
RHBDD1-213ENST00000491490 NPM1P06748 294 aaKnown RBP eCLIP11.95□□□□□ -0.5
RHBDD1-213ENST00000491490 CDK11AQ9UQ88 783 aaPredicted RBP11.94□□□□□ -0.5
RHBDD1-213ENST00000491490 TROQ12816 1431 aaPredicted RBP11.94□□□□□ -0.5
RHBDD1-213ENST00000491490 PLEKHD1A6NEE1 506 aa11.93□□□□□ -0.5
RHBDD1-213ENST00000491490 KCNH8Q96L42 1107 aa11.93□□□□□ -0.5
RHBDD1-213ENST00000491490 NCOA2Q15596 1464 aa11.93□□□□□ -0.5
RHBDD1-213ENST00000491490 DNAJC5Q9H3Z4 198 aa11.92□□□□□ -0.5
RHBDD1-213ENST00000491490 ASXL2Q76L83 1435 aa11.92□□□□□ -0.5
RHBDD1-213ENST00000491490 WDR7Q9Y4E6 1490 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms