RNA–Protein interactions for RNA: ENST00000491274.5

SDHB-208, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-208ENST00000491274 ABCA10Q8WWZ4 1543 aa11.33□□□□□ -0.6
SDHB-208ENST00000491274 SNAPC4Q5SXM2 1469 aa11.32□□□□□ -0.6
SDHB-208ENST00000491274 SYNJ1O43426 1573 aa11.31□□□□□ -0.6
SDHB-208ENST00000491274 TOP2BQ02880 1626 aa11.31□□□□□ -0.6
SDHB-208ENST00000491274 MAGI1Q96QZ7 1491 aaPredicted RBP11.28□□□□□ -0.6
SDHB-208ENST00000491274 WDR97A6NE52 1622 aa11.27□□□□□ -0.61
SDHB-208ENST00000491274 SYNJ2O15056 1496 aa11.25□□□□□ -0.61
SDHB-208ENST00000491274 BIVM-ERCC5R4GMW8 1640 aa11.25□□□□□ -0.61
SDHB-208ENST00000491274 CYB5RLQ6IPT4 315 aa11.24□□□□□ -0.61
SDHB-208ENST00000491274 KIF27Q86VH2 1401 aa11.24□□□□□ -0.61
SDHB-208ENST00000491274 FHAD1B1AJZ9 1412 aa11.22□□□□□ -0.61
SDHB-208ENST00000491274 FKBP8Q14318 412 aa11.21□□□□□ -0.61
SDHB-208ENST00000491274 IGF1RP08069 1367 aa11.2□□□□□ -0.62
SDHB-208ENST00000491274 ABCA5Q8WWZ7 1642 aa11.19□□□□□ -0.62
SDHB-208ENST00000491274 ERICH3Q5RHP9 1530 aa11.18□□□□□ -0.62
SDHB-208ENST00000491274 GRIN2AQ12879 1464 aa11.17□□□□□ -0.62
SDHB-208ENST00000491274 CHD1O14646 1710 aa11.15□□□□□ -0.62
SDHB-208ENST00000491274 ARHGEF11O15085 1522 aa11.15□□□□□ -0.62
SDHB-208ENST00000491274 CACNB1Q02641 598 aaPredicted RBP11.15□□□□□ -0.62
SDHB-208ENST00000491274 JPH4Q96JJ6 628 aa11.15□□□□□ -0.62
SDHB-208ENST00000491274 CARMIL1Q5VZK9 1371 aa11.15□□□□□ -0.63
SDHB-208ENST00000491274 PBRM1Q86U86 1689 aa11.14□□□□□ -0.63
SDHB-208ENST00000491274 MYCNP04198 464 aaPredicted RBP11.12□□□□□ -0.63
SDHB-208ENST00000491274 ADAMTS12P58397 1594 aa11.11□□□□□ -0.63
SDHB-208ENST00000491274 NUP160Q12769 1436 aa11.11□□□□□ -0.63
SDHB-208ENST00000491274 RIMBP3CA6NJZ7 1639 aa11.11□□□□□ -0.63
SDHB-208ENST00000491274 RIMBP3BA6NNM3 1639 aa11.11□□□□□ -0.63
SDHB-208ENST00000491274 RIMBP3Q9UFD9 1639 aa11.11□□□□□ -0.63
SDHB-208ENST00000491274 ATXN8OSP0DMR3 200 aa11.11□□□□□ -0.63
SDHB-208ENST00000491274 RNF39Q9H2S5 420 aa11.1□□□□□ -0.63
SDHB-208ENST00000491274 CLASP1Q7Z460 1538 aa11.09□□□□□ -0.63
SDHB-208ENST00000491274 FAM9AQ8IZU1 332 aaPredicted RBP11.09□□□□□ -0.63
SDHB-208ENST00000491274 TRHP20396 242 aaPredicted RBP11.08□□□□□ -0.64
SDHB-208ENST00000491274 RUSC2Q8N2Y8 1516 aa11.08□□□□□ -0.64
SDHB-208ENST00000491274 TTBK1Q5TCY1 1321 aaPredicted RBP11.07□□□□□ -0.64
SDHB-208ENST00000491274 ARAP1Q96P48 1450 aa11.06□□□□□ -0.64
SDHB-208ENST00000491274 PRG4Q92954 1404 aaPredicted RBP11.06□□□□□ -0.64
SDHB-208ENST00000491274 CEP170Q5SW79 1584 aa11.05□□□□□ -0.64
SDHB-208ENST00000491274 KIAA0586Q9BVV6 1533 aa11.04□□□□□ -0.64
SDHB-208ENST00000491274 RAPGEF2Q9Y4G8 1499 aa11.03□□□□□ -0.64
SDHB-208ENST00000491274 NPM1P06748 294 aaKnown RBP eCLIP11.01□□□□□ -0.65
SDHB-208ENST00000491274 CUL7Q14999 1698 aa11.01□□□□□ -0.65
SDHB-208ENST00000491274 CARMIL2Q6F5E8 1435 aa10.98□□□□□ -0.65
SDHB-208ENST00000491274 EEA1Q15075 1411 aa10.97□□□□□ -0.65
SDHB-208ENST00000491274 ERCC6L2Q5T890 1561 aa10.97□□□□□ -0.65
SDHB-208ENST00000491274 PTPRGP23470 1445 aa10.96□□□□□ -0.65
SDHB-208ENST00000491274 RANGAP1P46060 587 aaPredicted RBP10.96□□□□□ -0.65
SDHB-208ENST00000491274 ATF5Q9Y2D1 282 aaPredicted RBP10.96□□□□□ -0.65
SDHB-208ENST00000491274 PRXQ9BXM0 1461 aa10.94□□□□□ -0.66
SDHB-208ENST00000491274 UBTFP17480 764 aaKnown RBP10.94□□□□□ -0.66
SDHB-208ENST00000491274 C1QBPQ07021 282 aaKnown RBP10.94□□□□□ -0.66
SDHB-208ENST00000491274 TNIKQ9UKE5 1360 aa10.93□□□□□ -0.66
SDHB-208ENST00000491274 SHROOM2Q13796 1616 aa10.92□□□□□ -0.66
SDHB-208ENST00000491274 P3H3Q8IVL6 736 aa10.92□□□□□ -0.66
SDHB-208ENST00000491274 IQGAP2Q13576 1575 aa10.9□□□□□ -0.67
SDHB-208ENST00000491274 FAM69CQ0P6D2 419 aa10.86□□□□□ -0.67
SDHB-208ENST00000491274 GOLGA3Q08378 1498 aa10.86□□□□□ -0.67
SDHB-208ENST00000491274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.85□□□□□ -0.671e-7■□□□□ 11.1
SDHB-208ENST00000491274 UACAQ9BZF9 1416 aa10.84□□□□□ -0.67
SDHB-208ENST00000491274 DISP1Q96F81 1524 aa10.84□□□□□ -0.67
SDHB-208ENST00000491274 UGGT2Q9NYU1 1516 aa10.84□□□□□ -0.67
SDHB-208ENST00000491274 ARID3CA6NKF2 412 aa10.82□□□□□ -0.68
SDHB-208ENST00000491274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.81□□□□□ -0.68
SDHB-208ENST00000491274 HNRNPUL2Q1KMD3 747 aaKnown RBP10.81□□□□□ -0.68
SDHB-208ENST00000491274 ATP1B4Q9UN42 357 aaPredicted RBP10.79□□□□□ -0.68
SDHB-208ENST00000491274 KCNH8Q96L42 1107 aa10.78□□□□□ -0.68
SDHB-208ENST00000491274 ABCC2Q92887 1545 aa10.78□□□□□ -0.68
SDHB-208ENST00000491274 KIAA0556O60303 1618 aa10.77□□□□□ -0.68
SDHB-208ENST00000491274 UHRF1BP1LA0JNW5 1464 aa10.77□□□□□ -0.69
SDHB-208ENST00000491274 PLB1Q6P1J6 1458 aa10.76□□□□□ -0.69
SDHB-208ENST00000491274 ADCY10Q96PN6 1610 aa10.76□□□□□ -0.69
SDHB-208ENST00000491274 ASXL2Q76L83 1435 aa10.75□□□□□ -0.69
SDHB-208ENST00000491274 ABCC10Q5T3U5 1492 aa10.74□□□□□ -0.69
SDHB-208ENST00000491274 KIF21BO75037 1637 aa10.74□□□□□ -0.69
SDHB-208ENST00000491274 FHOD3Q2V2M9 1422 aa10.74□□□□□ -0.69
SDHB-208ENST00000491274 CTTNBP2Q8WZ74 1663 aa10.73□□□□□ -0.69
SDHB-208ENST00000491274 MAPKBP1O60336 1514 aa10.73□□□□□ -0.69
SDHB-208ENST00000491274 PLEKHD1A6NEE1 506 aa10.71□□□□□ -0.69
SDHB-208ENST00000491274 KDM5BQ9UGL1 1544 aa10.71□□□□□ -0.69
SDHB-208ENST00000491274 LOC105371045A0A1W2PR82 267 aa10.68□□□□□ -0.7
SDHB-208ENST00000491274 U3KPZ7 1027 aaPredicted RBP10.68□□□□□ -0.7
SDHB-208ENST00000491274 ATP10BO94823 1461 aa10.68□□□□□ -0.7
SDHB-208ENST00000491274 ABCA8O94911 1581 aa10.67□□□□□ -0.7
SDHB-208ENST00000491274 CDK11AQ9UQ88 783 aaPredicted RBP10.66□□□□□ -0.7
SDHB-208ENST00000491274 EFCAB5A4FU69 1503 aa10.66□□□□□ -0.7
SDHB-208ENST00000491274 WDR7Q9Y4E6 1490 aa10.66□□□□□ -0.7
SDHB-208ENST00000491274 FMN1Q68DA7 1419 aa10.66□□□□□ -0.7
SDHB-208ENST00000491274 SAMD9Q5K651 1589 aa10.65□□□□□ -0.7
SDHB-208ENST00000491274 EPRSP07814 1512 aaKnown RBP10.65□□□□□ -0.7
SDHB-208ENST00000491274 DIP2BQ9P265 1576 aa10.64□□□□□ -0.71
SDHB-208ENST00000491274 ARHGAP35Q9NRY4 1499 aa10.63□□□□□ -0.71
SDHB-208ENST00000491274 SAMD1Q6SPF0 538 aaPredicted RBP10.63□□□□□ -0.71
SDHB-208ENST00000491274 CLIP1P30622 1438 aa10.63□□□□□ -0.71
SDHB-208ENST00000491274 CD109Q6YHK3 1445 aa10.63□□□□□ -0.71
SDHB-208ENST00000491274 ZCCHC11Q5TAX3 1644 aaKnown RBP10.62□□□□□ -0.71
SDHB-208ENST00000491274 NUP153P49790 1475 aaKnown RBP10.61□□□□□ -0.71
SDHB-208ENST00000491274 RAPGEF6Q8TEU7 1601 aa10.6□□□□□ -0.71
SDHB-208ENST00000491274 TEX14Q8IWB6 1497 aa10.59□□□□□ -0.71
SDHB-208ENST00000491274 GLI2P10070 1586 aa10.59□□□□□ -0.71
SDHB-208ENST00000491274 KIF13AQ9H1H9 1805 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms