RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 ATAD2BQ9ULI0 1458 aa9.9□□□□□ -0.83
FN1-223ENST00000490833 BAZ1BQ9UIG0 1483 aaKnown RBP9.89□□□□□ -0.83
FN1-223ENST00000490833 EIF4G1Q04637 1599 aaKnown RBP9.88□□□□□ -0.83
FN1-223ENST00000490833 CLEC11AQ9Y240 323 aa9.86□□□□□ -0.83
FN1-223ENST00000490833 NCAPD3P42695 1498 aa9.85□□□□□ -0.83
FN1-223ENST00000490833 POTEIP0CG38 1075 aa9.85□□□□□ -0.83
FN1-223ENST00000490833 CSRNP3Q8WYN3 585 aa9.84□□□□□ -0.83
FN1-223ENST00000490833 ZNF692Q9BU19 519 aaPredicted RBP9.84□□□□□ -0.83
FN1-223ENST00000490833 WRNQ14191 1432 aaPredicted RBP eCLIP9.83□□□□□ -0.84
FN1-223ENST00000490833 MKRN4PQ13434 485 aaPredicted RBP9.83□□□□□ -0.84
FN1-223ENST00000490833 TNIKQ9UKE5 1360 aa9.83□□□□□ -0.84
FN1-223ENST00000490833 HMGXB3Q12766 1538 aa9.82□□□□□ -0.84
FN1-223ENST00000490833 FAM9AQ8IZU1 332 aaPredicted RBP9.82□□□□□ -0.84
FN1-223ENST00000490833 SPDYE1Q8NFV5 336 aaPredicted RBP9.8□□□□□ -0.84
FN1-223ENST00000490833 GOLGA3Q08378 1498 aa9.75□□□□□ -0.85
FN1-223ENST00000490833 CEP164Q9UPV0 1460 aa9.75□□□□□ -0.85
FN1-223ENST00000490833 SSUH2Q9Y2M2 353 aa9.74□□□□□ -0.85
FN1-223ENST00000490833 UBTFP17480 764 aaKnown RBP9.73□□□□□ -0.85
FN1-223ENST00000490833 CHADLQ6NUI6 762 aa9.72□□□□□ -0.85
FN1-223ENST00000490833 ABCC8Q09428 1581 aa9.71□□□□□ -0.86
FN1-223ENST00000490833 KIF21BO75037 1637 aa9.68□□□□□ -0.86
FN1-223ENST00000490833 CEP162Q5TB80 1403 aa9.68□□□□□ -0.86
FN1-223ENST00000490833 TOP2BQ02880 1626 aa9.67□□□□□ -0.86
FN1-223ENST00000490833 CFTRP13569 1480 aa9.67□□□□□ -0.86
FN1-223ENST00000490833 SOGA1O94964 1423 aa9.67□□□□□ -0.86
FN1-223ENST00000490833 POTEMA6NI47 508 aa9.67□□□□□ -0.86
FN1-223ENST00000490833 PRR29P0C7W0 189 aa9.64□□□□□ -0.87
FN1-223ENST00000490833 CLCN6P51797 869 aa9.64□□□□□ -0.87
FN1-223ENST00000490833 EHMT2Q96KQ7 1210 aa9.64□□□□□ -0.87
FN1-223ENST00000490833 KIF27Q86VH2 1401 aa9.64□□□□□ -0.87
FN1-223ENST00000490833 ERICH3Q5RHP9 1530 aa9.62□□□□□ -0.87
FN1-223ENST00000490833 POTEGQ6S5H5 508 aa9.62□□□□□ -0.87
FN1-223ENST00000490833 OTUD5Q96G74 571 aa9.62□□□□□ -0.87
FN1-223ENST00000490833 DCBLD2Q96PD2 775 aa9.62□□□□□ -0.87
FN1-223ENST00000490833 BIVM-ERCC5R4GMW8 1640 aa9.62□□□□□ -0.87
FN1-223ENST00000490833 CADPSQ9ULU8 1353 aa9.62□□□□□ -0.87
FN1-223ENST00000490833 CD44P16070 742 aaKnown RBP9.61□□□□□ -0.87
FN1-223ENST00000490833 SYNJ1O43426 1573 aa9.59□□□□□ -0.87
FN1-223ENST00000490833 CLIP1P30622 1438 aa9.58□□□□□ -0.88
FN1-223ENST00000490833 PCDH10Q9P2E7 1040 aa9.56□□□□□ -0.88
FN1-223ENST00000490833 VPS8Q8N3P4 1428 aa9.56□□□□□ -0.88
FN1-223ENST00000490833 PRXQ9BXM0 1461 aa9.55□□□□□ -0.88
FN1-223ENST00000490833 PRDM2Q13029 1718 aa9.54□□□□□ -0.88
FN1-223ENST00000490833 CCER1Q8TC90 406 aaPredicted RBP9.53□□□□□ -0.88
FN1-223ENST00000490833 RUSC2Q8N2Y8 1516 aa9.52□□□□□ -0.88
FN1-223ENST00000490833 POTEB2H3BUK9 544 aa9.51□□□□□ -0.89
FN1-223ENST00000490833 CLSPNQ9HAW4 1339 aa9.51□□□□□ -0.89
FN1-223ENST00000490833 FARP1Q9Y4F1 1045 aaPredicted RBP9.5□□□□□ -0.89
FN1-223ENST00000490833 CUX1P39880 1505 aa9.49□□□□□ -0.89
FN1-223ENST00000490833 RAPGEF2Q9Y4G8 1499 aa9.47□□□□□ -0.89
FN1-223ENST00000490833 CC2D2AQ9P2K1 1620 aa9.46□□□□□ -0.89
FN1-223ENST00000490833 PDS5BQ9NTI5 1447 aa9.45□□□□□ -0.9
FN1-223ENST00000490833 MAP3K1Q13233 1512 aa9.45□□□□□ -0.9
FN1-223ENST00000490833 LAMC3Q9Y6N6 1575 aa9.45□□□□□ -0.9
FN1-223ENST00000490833 IGF1RP08069 1367 aa9.44□□□□□ -0.9
FN1-223ENST00000490833 FANCD2Q9BXW9 1451 aa9.43□□□□□ -0.9
FN1-223ENST00000490833 FHAD1B1AJZ9 1412 aa9.43□□□□□ -0.9
FN1-223ENST00000490833 CARMIL1Q5VZK9 1371 aa9.43□□□□□ -0.9
FN1-223ENST00000490833 ZNF579Q8NAF0 562 aaKnown RBP9.43□□□□□ -0.9
FN1-223ENST00000490833 CUX2O14529 1486 aa9.41□□□□□ -0.9
FN1-223ENST00000490833 DNMBPQ6XZF7 1577 aa9.41□□□□□ -0.9
FN1-223ENST00000490833 ACIN1Q9UKV3 1341 aaKnown RBP9.4□□□□□ -0.9
FN1-223ENST00000490833 SPDYE4A6NLX3 237 aa9.4□□□□□ -0.9
FN1-223ENST00000490833 ABCA10Q8WWZ4 1543 aa9.4□□□□□ -0.91
FN1-223ENST00000490833 PPARGC1BQ86YN6 1023 aaKnown RBP9.39□□□□□ -0.91
FN1-223ENST00000490833 STAG3Q9UJ98 1225 aa9.39□□□□□ -0.91
FN1-223ENST00000490833 GALR2O43603 387 aaPredicted RBP9.38□□□□□ -0.91
FN1-223ENST00000490833 ZRANB1Q9UGI0 708 aa9.38□□□□□ -0.91
FN1-223ENST00000490833 FGD5Q6ZNL6 1462 aa9.38□□□□□ -0.91
FN1-223ENST00000490833 DNAJC5Q9H3Z4 198 aa9.36□□□□□ -0.91
FN1-223ENST00000490833 CUL7Q14999 1698 aa9.35□□□□□ -0.91
FN1-223ENST00000490833 EFCAB5A4FU69 1503 aa9.35□□□□□ -0.91
FN1-223ENST00000490833 TOPBP1Q92547 1522 aa9.34□□□□□ -0.91
FN1-223ENST00000490833 RRBP1Q9P2E9 1410 aaKnown RBP9.33□□□□□ -0.92
FN1-223ENST00000490833 AQRO60306 1485 aaKnown RBP eCLIP9.33□□□□□ -0.922e-15■■■■■ 36.1
FN1-223ENST00000490833 ARAP1Q96P48 1450 aa9.33□□□□□ -0.92
FN1-223ENST00000490833 FMN1Q68DA7 1419 aa9.32□□□□□ -0.92
FN1-223ENST00000490833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.32□□□□□ -0.92
FN1-223ENST00000490833 LCE2DQ5TA82 110 aaPredicted RBP9.31□□□□□ -0.92
FN1-223ENST00000490833 CREBZFQ9NS37 354 aa9.31□□□□□ -0.92
FN1-223ENST00000490833 TIMELESSQ9UNS1 1208 aa9.31□□□□□ -0.92
FN1-223ENST00000490833 ARHGAP35Q9NRY4 1499 aa9.31□□□□□ -0.92
FN1-223ENST00000490833 POLA1P09884 1462 aaPredicted RBP9.3□□□□□ -0.92
FN1-223ENST00000490833 CCNB3Q8WWL7 1395 aa9.3□□□□□ -0.92
FN1-223ENST00000490833 ZNF316A6NFI3 1004 aaPredicted RBP9.29□□□□□ -0.92
FN1-223ENST00000490833 PELP1Q8IZL8 1130 aaKnown RBP9.29□□□□□ -0.92
FN1-223ENST00000490833 WDR97A6NE52 1622 aa9.27□□□□□ -0.92
FN1-223ENST00000490833 CENPBP07199 599 aaPredicted RBP9.27□□□□□ -0.93
FN1-223ENST00000490833 FYCO1Q9BQS8 1478 aa9.27□□□□□ -0.93
FN1-223ENST00000490833 CASKIN1Q8WXD9 1431 aa9.26□□□□□ -0.93
FN1-223ENST00000490833 PAK3O75914 559 aaPredicted RBP9.26□□□□□ -0.93
FN1-223ENST00000490833 POTEJP0CG39 1038 aa9.26□□□□□ -0.93
FN1-223ENST00000490833 RANGAP1P46060 587 aaPredicted RBP9.26□□□□□ -0.93
FN1-223ENST00000490833 DIEXFQ68CQ4 756 aaKnown RBP9.26□□□□□ -0.93
FN1-223ENST00000490833 FAM163AQ96GL9 167 aaPredicted RBP9.26□□□□□ -0.93
FN1-223ENST00000490833 GAPVD1Q14C86 1478 aa9.25□□□□□ -0.93
FN1-223ENST00000490833 TTBK1Q5TCY1 1321 aaPredicted RBP9.24□□□□□ -0.93
FN1-223ENST00000490833 LRRC9Q6ZRR7 1453 aa9.23□□□□□ -0.93
FN1-223ENST00000490833 TIAM1Q13009 1591 aa9.23□□□□□ -0.93
FN1-223ENST00000490833 NPM1P06748 294 aaKnown RBP eCLIP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms