RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 KIF21BO75037 1637 aa17.86■□□□□ 0.45
VARS2-210ENST00000490699 PRXQ9BXM0 1461 aa17.83■□□□□ 0.45
VARS2-210ENST00000490699 GOLGA3Q08378 1498 aa17.82■□□□□ 0.44
VARS2-210ENST00000490699 GRIN2AQ12879 1464 aa17.81■□□□□ 0.44
VARS2-210ENST00000490699 CHD1O14646 1710 aa17.81■□□□□ 0.44
VARS2-210ENST00000490699 UBTFP17480 764 aaKnown RBP17.75■□□□□ 0.43
VARS2-210ENST00000490699 EHMT2Q96KQ7 1210 aa17.74■□□□□ 0.43
VARS2-210ENST00000490699 CTTNBP2Q8WZ74 1663 aa17.71■□□□□ 0.42
VARS2-210ENST00000490699 OSCARQ8IYS5 282 aa17.68■□□□□ 0.42
VARS2-210ENST00000490699 NUP160Q12769 1436 aa17.67■□□□□ 0.42
VARS2-210ENST00000490699 CEP170Q5SW79 1584 aa17.66■□□□□ 0.42
VARS2-210ENST00000490699 KIAA0586Q9BVV6 1533 aa17.64■□□□□ 0.41
VARS2-210ENST00000490699 IQGAP2Q13576 1575 aa17.64■□□□□ 0.41
VARS2-210ENST00000490699 TNIKQ9UKE5 1360 aa17.62■□□□□ 0.41
VARS2-210ENST00000490699 DNAJC5Q9H3Z4 198 aa17.61■□□□□ 0.41
VARS2-210ENST00000490699 LOC105371045A0A1W2PR82 267 aa17.6■□□□□ 0.41
VARS2-210ENST00000490699 CLASP1Q7Z460 1538 aa17.57■□□□□ 0.4
VARS2-210ENST00000490699 RANGAP1P46060 587 aaPredicted RBP17.53■□□□□ 0.4
VARS2-210ENST00000490699 CARMIL2Q6F5E8 1435 aa17.53■□□□□ 0.4
VARS2-210ENST00000490699 JPH4Q96JJ6 628 aa17.52■□□□□ 0.4
VARS2-210ENST00000490699 EFCAB5A4FU69 1503 aa17.52■□□□□ 0.39
VARS2-210ENST00000490699 UGGT2Q9NYU1 1516 aa17.52■□□□□ 0.39
VARS2-210ENST00000490699 SHROOM2Q13796 1616 aa17.5■□□□□ 0.39
VARS2-210ENST00000490699 CLIP1P30622 1438 aa17.48■□□□□ 0.39
VARS2-210ENST00000490699 CEP162Q5TB80 1403 aa17.48■□□□□ 0.39
VARS2-210ENST00000490699 PRG4Q92954 1404 aaPredicted RBP17.47■□□□□ 0.39
VARS2-210ENST00000490699 SAMD9Q5K651 1589 aa17.44■□□□□ 0.38
VARS2-210ENST00000490699 KIAA0556O60303 1618 aa17.43■□□□□ 0.38
VARS2-210ENST00000490699 DISP1Q96F81 1524 aa17.39■□□□□ 0.37
VARS2-210ENST00000490699 ARHGAP35Q9NRY4 1499 aa17.38■□□□□ 0.37
VARS2-210ENST00000490699 P3H3Q8IVL6 736 aa17.38■□□□□ 0.37
VARS2-210ENST00000490699 FMN1Q68DA7 1419 aa17.36■□□□□ 0.37
VARS2-210ENST00000490699 CACNB1Q02641 598 aaPredicted RBP17.35■□□□□ 0.37
VARS2-210ENST00000490699 FHOD3Q2V2M9 1422 aa17.35■□□□□ 0.37
VARS2-210ENST00000490699 ARHGEF11O15085 1522 aa17.35■□□□□ 0.37
VARS2-210ENST00000490699 TTBK1Q5TCY1 1321 aaPredicted RBP17.34■□□□□ 0.37
VARS2-210ENST00000490699 PTPRGP23470 1445 aa17.33■□□□□ 0.36
VARS2-210ENST00000490699 ERCC6L2Q5T890 1561 aa17.32■□□□□ 0.36
VARS2-210ENST00000490699 RIMBP3CA6NJZ7 1639 aa17.31■□□□□ 0.36
VARS2-210ENST00000490699 RIMBP3BA6NNM3 1639 aa17.31■□□□□ 0.36
VARS2-210ENST00000490699 RIMBP3Q9UFD9 1639 aa17.31■□□□□ 0.36
VARS2-210ENST00000490699 ARAP1Q96P48 1450 aa17.3■□□□□ 0.36
VARS2-210ENST00000490699 DMRT2Q9Y5R5 561 aa17.29■□□□□ 0.36
VARS2-210ENST00000490699 VPS8Q8N3P4 1428 aa17.26■□□□□ 0.35
VARS2-210ENST00000490699 ATP1B4Q9UN42 357 aaPredicted RBP17.24■□□□□ 0.35
VARS2-210ENST00000490699 HECW1Q76N89 1606 aa17.23■□□□□ 0.35
VARS2-210ENST00000490699 RAPGEF6Q8TEU7 1601 aa17.23■□□□□ 0.35
VARS2-210ENST00000490699 MAPK8IP2Q13387 824 aaPredicted RBP17.23■□□□□ 0.35
VARS2-210ENST00000490699 APLP2Q06481 763 aa17.22■□□□□ 0.35
VARS2-210ENST00000490699 FYCO1Q9BQS8 1478 aa17.22■□□□□ 0.35
VARS2-210ENST00000490699 UACAQ9BZF9 1416 aa17.21■□□□□ 0.35
VARS2-210ENST00000490699 CASKIN1Q8WXD9 1431 aa17.21■□□□□ 0.34
VARS2-210ENST00000490699 PCF11O94913 1555 aaKnown RBP17.2■□□□□ 0.34
VARS2-210ENST00000490699 ABCC2Q92887 1545 aa17.19■□□□□ 0.34
VARS2-210ENST00000490699 ABCA8O94911 1581 aa17.19■□□□□ 0.34
VARS2-210ENST00000490699 PLB1Q6P1J6 1458 aa17.18■□□□□ 0.34
VARS2-210ENST00000490699 CYB5RLQ6IPT4 315 aa17.18■□□□□ 0.34
VARS2-210ENST00000490699 NPM1P06748 294 aaKnown RBP eCLIP17.17■□□□□ 0.34
VARS2-210ENST00000490699 UHRF1BP1LA0JNW5 1464 aa17.17■□□□□ 0.34
VARS2-210ENST00000490699 CCDC18Q5T9S5 1454 aa17.16■□□□□ 0.34
VARS2-210ENST00000490699 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.15■□□□□ 0.34
VARS2-210ENST00000490699 HNRNPUL2Q1KMD3 747 aaKnown RBP17.15■□□□□ 0.34
VARS2-210ENST00000490699 CDK11AQ9UQ88 783 aaPredicted RBP17.12■□□□□ 0.33
VARS2-210ENST00000490699 ADCY10Q96PN6 1610 aa17.11■□□□□ 0.33
VARS2-210ENST00000490699 NUP153P49790 1475 aaKnown RBP17.11■□□□□ 0.33
VARS2-210ENST00000490699 EPRSP07814 1512 aaKnown RBP17.1■□□□□ 0.33
VARS2-210ENST00000490699 ARID3CA6NKF2 412 aa17.08■□□□□ 0.32
VARS2-210ENST00000490699 ZCCHC11Q5TAX3 1644 aaKnown RBP17.07■□□□□ 0.32
VARS2-210ENST00000490699 KDM5BQ9UGL1 1544 aa17.06■□□□□ 0.32
VARS2-210ENST00000490699 CFAP43Q8NDM7 1665 aa17.06■□□□□ 0.32
VARS2-210ENST00000490699 MAP3K1Q13233 1512 aa17.06■□□□□ 0.32
VARS2-210ENST00000490699 TIAM1Q13009 1591 aa17.04■□□□□ 0.32
VARS2-210ENST00000490699 CDK13Q14004 1512 aaKnown RBP17.04■□□□□ 0.32
VARS2-210ENST00000490699 ATP10BO94823 1461 aa17.04■□□□□ 0.32
VARS2-210ENST00000490699 PLEKHD1A6NEE1 506 aa17.03■□□□□ 0.32
VARS2-210ENST00000490699 MTUS2Q5JR59 1369 aa17.02■□□□□ 0.32
VARS2-210ENST00000490699 LRRIQ1Q96JM4 1722 aa17.02■□□□□ 0.32
VARS2-210ENST00000490699 EHBP1L1Q8N3D4 1523 aa16.99■□□□□ 0.31
VARS2-210ENST00000490699 MAPKBP1O60336 1514 aa16.96■□□□□ 0.31
VARS2-210ENST00000490699 WDR7Q9Y4E6 1490 aa16.96■□□□□ 0.31
VARS2-210ENST00000490699 TROQ12816 1431 aaPredicted RBP16.96■□□□□ 0.3
VARS2-210ENST00000490699 ASXL2Q76L83 1435 aa16.96■□□□□ 0.3
VARS2-210ENST00000490699 LRRC9Q6ZRR7 1453 aa16.95■□□□□ 0.3
VARS2-210ENST00000490699 KIF14Q15058 1648 aa16.95■□□□□ 0.3
VARS2-210ENST00000490699 SUPT6HQ7KZ85 1726 aaKnown RBP16.93■□□□□ 0.3
VARS2-210ENST00000490699 SCAF1Q9H7N4 1312 aaKnown RBP16.9■□□□□ 0.3
VARS2-210ENST00000490699 KCNH8Q96L42 1107 aa16.89■□□□□ 0.29
VARS2-210ENST00000490699 MAGI3Q5TCQ9 1506 aa16.87■□□□□ 0.29
VARS2-210ENST00000490699 KANK4Q5T7N3 995 aaPredicted RBP16.87■□□□□ 0.29
VARS2-210ENST00000490699 PPARGC1BQ86YN6 1023 aaKnown RBP16.84■□□□□ 0.29
VARS2-210ENST00000490699 CCNB3Q8WWL7 1395 aa16.84■□□□□ 0.29
VARS2-210ENST00000490699 NCOA2Q15596 1464 aa16.84■□□□□ 0.29
VARS2-210ENST00000490699 ITSN2Q9NZM3 1697 aa16.83■□□□□ 0.28
VARS2-210ENST00000490699 ABCC10Q5T3U5 1492 aa16.82■□□□□ 0.28
VARS2-210ENST00000490699 MYO5CQ9NQX4 1742 aa16.81■□□□□ 0.28
VARS2-210ENST00000490699 ABCA9Q8IUA7 1624 aa16.81■□□□□ 0.28
VARS2-210ENST00000490699 DIP2BQ9P265 1576 aa16.81■□□□□ 0.28
VARS2-210ENST00000490699 FAM69CQ0P6D2 419 aa16.8■□□□□ 0.28
VARS2-210ENST00000490699 GLI2P10070 1586 aa16.8■□□□□ 0.28
VARS2-210ENST00000490699 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1620.8 ms