RNA–Protein interactions for RNA: ENST00000490610.1

CACUL1-205, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-205ENST00000490610 CEP164Q9UPV0 1460 aa14.81□□□□□ -0.04
CACUL1-205ENST00000490610 PDS5BQ9NTI5 1447 aa14.8□□□□□ -0.04
CACUL1-205ENST00000490610 KIF27Q86VH2 1401 aa14.76□□□□□ -0.05
CACUL1-205ENST00000490610 FGD5Q6ZNL6 1462 aa14.76□□□□□ -0.05
CACUL1-205ENST00000490610 TNIKQ9UKE5 1360 aa14.74□□□□□ -0.05
CACUL1-205ENST00000490610 TOPBP1Q92547 1522 aa14.74□□□□□ -0.05
CACUL1-205ENST00000490610 KIF21AQ7Z4S6 1674 aa14.74□□□□□ -0.05
CACUL1-205ENST00000490610 ERICH3Q5RHP9 1530 aa14.72□□□□□ -0.05
CACUL1-205ENST00000490610 CEP162Q5TB80 1403 aa14.67□□□□□ -0.06
CACUL1-205ENST00000490610 CUX2O14529 1486 aa14.67□□□□□ -0.06
CACUL1-205ENST00000490610 URB2Q14146 1524 aaKnown RBP14.66□□□□□ -0.06
CACUL1-205ENST00000490610 POLA1P09884 1462 aaPredicted RBP14.66□□□□□ -0.06
CACUL1-205ENST00000490610 PRXQ9BXM0 1461 aa14.66□□□□□ -0.06
CACUL1-205ENST00000490610 ABCA10Q8WWZ4 1543 aa14.66□□□□□ -0.06
CACUL1-205ENST00000490610 UBTFP17480 764 aaKnown RBP14.65□□□□□ -0.06
CACUL1-205ENST00000490610 RAPGEF2Q9Y4G8 1499 aa14.64□□□□□ -0.07
CACUL1-205ENST00000490610 WDR97A6NE52 1622 aa14.64□□□□□ -0.07
CACUL1-205ENST00000490610 MRC2Q9UBG0 1479 aa14.61□□□□□ -0.07
CACUL1-205ENST00000490610 ZBTB12Q9Y330 459 aaPredicted RBP14.6□□□□□ -0.07
CACUL1-205ENST00000490610 CUL7Q14999 1698 aa14.58□□□□□ -0.08
CACUL1-205ENST00000490610 RAD54L2Q9Y4B4 1467 aa14.57□□□□□ -0.08
CACUL1-205ENST00000490610 ABCA5Q8WWZ7 1642 aa14.55□□□□□ -0.08
CACUL1-205ENST00000490610 IGF1RP08069 1367 aa14.54□□□□□ -0.08
CACUL1-205ENST00000490610 CLIP1P30622 1438 aa14.54□□□□□ -0.08
CACUL1-205ENST00000490610 WDR62O43379 1518 aa14.54□□□□□ -0.08
CACUL1-205ENST00000490610 MKRN4PQ13434 485 aaPredicted RBP14.53□□□□□ -0.08
CACUL1-205ENST00000490610 TARBP1Q13395 1621 aaKnown RBP14.52□□□□□ -0.08
CACUL1-205ENST00000490610 ERCC6Q03468 1493 aa14.51□□□□□ -0.09
CACUL1-205ENST00000490610 FBLN2P98095 1184 aa14.51□□□□□ -0.09
CACUL1-205ENST00000490610 RBM42Q9BTD8 480 aaKnown RBP14.51□□□□□ -0.09
CACUL1-205ENST00000490610 CARMIL1Q5VZK9 1371 aa14.5□□□□□ -0.09
CACUL1-205ENST00000490610 TRIM26Q12899 539 aaPredicted RBP14.48□□□□□ -0.09
CACUL1-205ENST00000490610 GAPVD1Q14C86 1478 aa14.47□□□□□ -0.09
CACUL1-205ENST00000490610 THOC2Q8NI27 1593 aaKnown RBP14.47□□□□□ -0.09
CACUL1-205ENST00000490610 PBRM1Q86U86 1689 aa14.46□□□□□ -0.1
CACUL1-205ENST00000490610 IFT140Q96RY7 1462 aa14.45□□□□□ -0.1
CACUL1-205ENST00000490610 VPS8Q8N3P4 1428 aa14.44□□□□□ -0.1
CACUL1-205ENST00000490610 PCGF6Q9BYE7 350 aa14.44□□□□□ -0.1
CACUL1-205ENST00000490610 CTTNBP2Q8WZ74 1663 aa14.43□□□□□ -0.1
CACUL1-205ENST00000490610 OSCARQ8IYS5 282 aa14.4□□□□□ -0.1
CACUL1-205ENST00000490610 TDRD9Q8NDG6 1382 aaKnown RBP14.39□□□□□ -0.11
CACUL1-205ENST00000490610 ARAP1Q96P48 1450 aa14.37□□□□□ -0.11
CACUL1-205ENST00000490610 GRIN2BQ13224 1484 aa14.36□□□□□ -0.11
CACUL1-205ENST00000490610 ADAMTS12P58397 1594 aa14.35□□□□□ -0.11
CACUL1-205ENST00000490610 EFCAB5A4FU69 1503 aa14.35□□□□□ -0.11
CACUL1-205ENST00000490610 ARHGAP35Q9NRY4 1499 aa14.34□□□□□ -0.11
CACUL1-205ENST00000490610 EIF4G3O43432 1585 aaKnown RBP14.33□□□□□ -0.12
CACUL1-205ENST00000490610 FHAD1B1AJZ9 1412 aa14.32□□□□□ -0.12
CACUL1-205ENST00000490610 RANGAP1P46060 587 aaPredicted RBP14.3□□□□□ -0.12
CACUL1-205ENST00000490610 AQRO60306 1485 aaKnown RBP eCLIP14.3□□□□□ -0.12
CACUL1-205ENST00000490610 ZNF608Q9ULD9 1512 aaPredicted RBP14.28□□□□□ -0.12
CACUL1-205ENST00000490610 MAGI1Q96QZ7 1491 aaPredicted RBP14.25□□□□□ -0.13
CACUL1-205ENST00000490610 SAMD9Q5K651 1589 aa14.24□□□□□ -0.13
CACUL1-205ENST00000490610 PPARGC1BQ86YN6 1023 aaKnown RBP14.23□□□□□ -0.13
CACUL1-205ENST00000490610 AKT1S1Q96B36 256 aa14.23□□□□□ -0.13
CACUL1-205ENST00000490610 SNAPC4Q5SXM2 1469 aa14.23□□□□□ -0.13
CACUL1-205ENST00000490610 MAP3K1Q13233 1512 aa14.22□□□□□ -0.13
CACUL1-205ENST00000490610 SPDYE2BA6NHP3 402 aa14.22□□□□□ -0.13
CACUL1-205ENST00000490610 SPDYE6P0CI01 402 aa14.22□□□□□ -0.13
CACUL1-205ENST00000490610 SPDYE2Q495Y8 402 aa14.22□□□□□ -0.13
CACUL1-205ENST00000490610 IQGAP2Q13576 1575 aa14.22□□□□□ -0.13
CACUL1-205ENST00000490610 PCF11O94913 1555 aaKnown RBP14.18□□□□□ -0.14
CACUL1-205ENST00000490610 FMN1Q68DA7 1419 aa14.18□□□□□ -0.14
CACUL1-205ENST00000490610 CFAP43Q8NDM7 1665 aa14.18□□□□□ -0.14
CACUL1-205ENST00000490610 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
CACUL1-205ENST00000490610 GRIN2AQ12879 1464 aa14.18□□□□□ -0.14
CACUL1-205ENST00000490610 FYCO1Q9BQS8 1478 aa14.18□□□□□ -0.14
CACUL1-205ENST00000490610 POTEHQ6S545 545 aa14.17□□□□□ -0.14
CACUL1-205ENST00000490610 TIAM1Q13009 1591 aa14.17□□□□□ -0.14
CACUL1-205ENST00000490610 HRCP23327 699 aa14.16□□□□□ -0.14
CACUL1-205ENST00000490610 FHOD3Q2V2M9 1422 aa14.15□□□□□ -0.14
CACUL1-205ENST00000490610 ZNF692Q9BU19 519 aaPredicted RBP14.14□□□□□ -0.15
CACUL1-205ENST00000490610 KIAA0586Q9BVV6 1533 aa14.14□□□□□ -0.15
CACUL1-205ENST00000490610 UGGT2Q9NYU1 1516 aa14.14□□□□□ -0.15
CACUL1-205ENST00000490610 CASKIN1Q8WXD9 1431 aa14.14□□□□□ -0.15
CACUL1-205ENST00000490610 TTBK1Q5TCY1 1321 aaPredicted RBP14.14□□□□□ -0.15
CACUL1-205ENST00000490610 SPDYE4A6NLX3 237 aa14.13□□□□□ -0.15
CACUL1-205ENST00000490610 SSUH2Q9Y2M2 353 aa14.12□□□□□ -0.15
CACUL1-205ENST00000490610 REM2Q8IYK8 340 aaPredicted RBP14.1□□□□□ -0.15
CACUL1-205ENST00000490610 CHRDL2Q6WN34 429 aa14.09□□□□□ -0.15
CACUL1-205ENST00000490610 CEP170Q5SW79 1584 aa14.08□□□□□ -0.16
CACUL1-205ENST00000490610 P3H3Q8IVL6 736 aa14.07□□□□□ -0.16
CACUL1-205ENST00000490610 CHMP7Q8WUX9 453 aaPredicted RBP14.07□□□□□ -0.16
CACUL1-205ENST00000490610 KIAA0556O60303 1618 aa14.07□□□□□ -0.16
CACUL1-205ENST00000490610 NUP160Q12769 1436 aa14.07□□□□□ -0.16
CACUL1-205ENST00000490610 LRRC9Q6ZRR7 1453 aa14.06□□□□□ -0.16
CACUL1-205ENST00000490610 HECW1Q76N89 1606 aa14.06□□□□□ -0.16
CACUL1-205ENST00000490610 FKBP8Q14318 412 aa14.06□□□□□ -0.16
CACUL1-205ENST00000490610 CCDC18Q5T9S5 1454 aa14.04□□□□□ -0.16
CACUL1-205ENST00000490610 ZEB1P37275 1124 aaPredicted RBP14.03□□□□□ -0.16
CACUL1-205ENST00000490610 KANK4Q5T7N3 995 aaPredicted RBP14.03□□□□□ -0.16
CACUL1-205ENST00000490610 RRBP1Q9P2E9 1410 aaKnown RBP14.02□□□□□ -0.16
CACUL1-205ENST00000490610 CHD1O14646 1710 aa14.01□□□□□ -0.17
CACUL1-205ENST00000490610 LRRIQ1Q96JM4 1722 aa14.01□□□□□ -0.17
CACUL1-205ENST00000490610 DISP1Q96F81 1524 aa14□□□□□ -0.17
CACUL1-205ENST00000490610 CARMIL2Q6F5E8 1435 aa13.98□□□□□ -0.17
CACUL1-205ENST00000490610 ATP1B4Q9UN42 357 aaPredicted RBP13.98□□□□□ -0.17
CACUL1-205ENST00000490610 EHBP1L1Q8N3D4 1523 aa13.98□□□□□ -0.17
CACUL1-205ENST00000490610 SUPT6HQ7KZ85 1726 aaKnown RBP13.96□□□□□ -0.17
CACUL1-205ENST00000490610 CCNB3Q8WWL7 1395 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms