RNA–Protein interactions for RNA: ENST00000488861.6

SAMMSON-202, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

TSL 3

Gene SAMMSON, Length 1,433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-202ENST00000488861 FBXO3Q9UK99 471 aa10.6□□□□□ -0.71
SAMMSON-202ENST00000488861 HMGXB3Q12766 1538 aa10.58□□□□□ -0.72
SAMMSON-202ENST00000488861 PIP4P2Q8N4L2 257 aa10.58□□□□□ -0.72
SAMMSON-202ENST00000488861 PRKAR2AP13861 404 aaKnown RBP10.5□□□□□ -0.73
SAMMSON-202ENST00000488861 CC2D2AQ9P2K1 1620 aa10.5□□□□□ -0.73
SAMMSON-202ENST00000488861 TRIM41Q8WV44 630 aa10.48□□□□□ -0.73
SAMMSON-202ENST00000488861 PLEKHG5O94827 1062 aa10.46□□□□□ -0.74
SAMMSON-202ENST00000488861 CREBZFQ9NS37 354 aa10.45□□□□□ -0.74
SAMMSON-202ENST00000488861 CHADLQ6NUI6 762 aa10.41□□□□□ -0.74
SAMMSON-202ENST00000488861 MIER1Q8N108 512 aa10.41□□□□□ -0.74
SAMMSON-202ENST00000488861 ABCC8Q09428 1581 aa10.39□□□□□ -0.75
SAMMSON-202ENST00000488861 PLCD3Q8N3E9 789 aa10.39□□□□□ -0.75
SAMMSON-202ENST00000488861 ZBTB47Q9UFB7 747 aaPredicted RBP10.39□□□□□ -0.75
SAMMSON-202ENST00000488861 FARP1Q9Y4F1 1045 aaPredicted RBP10.39□□□□□ -0.75
SAMMSON-202ENST00000488861 VASPP50552 380 aaPredicted RBP10.38□□□□□ -0.75
SAMMSON-202ENST00000488861 CFTRP13569 1480 aa10.37□□□□□ -0.75
SAMMSON-202ENST00000488861 NPM1P06748 294 aaKnown RBP eCLIP10.35□□□□□ -0.75
SAMMSON-202ENST00000488861 WRNQ14191 1432 aaPredicted RBP eCLIP10.34□□□□□ -0.75
SAMMSON-202ENST00000488861 MNX1P50219 401 aaPredicted RBP10.33□□□□□ -0.76
SAMMSON-202ENST00000488861 CADPSQ9ULU8 1353 aa10.33□□□□□ -0.76
SAMMSON-202ENST00000488861 PRDM2Q13029 1718 aa10.29□□□□□ -0.76
SAMMSON-202ENST00000488861 LOC105371045A0A1W2PR82 267 aa10.29□□□□□ -0.76
SAMMSON-202ENST00000488861 SYNJ1O43426 1573 aa10.29□□□□□ -0.76
SAMMSON-202ENST00000488861 C19orf67A6NJJ6 358 aa10.26□□□□□ -0.77
SAMMSON-202ENST00000488861 HAX1O00165 279 aa10.26□□□□□ -0.77
SAMMSON-202ENST00000488861 FAM9AQ8IZU1 332 aaPredicted RBP10.26□□□□□ -0.77
SAMMSON-202ENST00000488861 TOP2BQ02880 1626 aa10.26□□□□□ -0.77
SAMMSON-202ENST00000488861 BIVM-ERCC5R4GMW8 1640 aa10.24□□□□□ -0.77
SAMMSON-202ENST00000488861 EEA1Q15075 1411 aa10.23□□□□□ -0.77
SAMMSON-202ENST00000488861 SOGA1O94964 1423 aa10.22□□□□□ -0.77
SAMMSON-202ENST00000488861 CUX1P39880 1505 aa10.22□□□□□ -0.77
SAMMSON-202ENST00000488861 LAMC3Q9Y6N6 1575 aa10.21□□□□□ -0.77
SAMMSON-202ENST00000488861 NESP48681 1621 aa10.2□□□□□ -0.78
SAMMSON-202ENST00000488861 PAK3O75914 559 aaPredicted RBP10.2□□□□□ -0.78
SAMMSON-202ENST00000488861 CD44P16070 742 aaKnown RBP10.2□□□□□ -0.78
SAMMSON-202ENST00000488861 IFNLR1Q8IU57 520 aaPredicted RBP10.2□□□□□ -0.78
SAMMSON-202ENST00000488861 KLHL34Q8N239 644 aa10.2□□□□□ -0.78
SAMMSON-202ENST00000488861 FANCD2Q9BXW9 1451 aa10.19□□□□□ -0.78
SAMMSON-202ENST00000488861 RUSC2Q8N2Y8 1516 aa10.19□□□□□ -0.78
SAMMSON-202ENST00000488861 CLCN6P51797 869 aa10.16□□□□□ -0.78
SAMMSON-202ENST00000488861 NUBP1P53384 320 aa10.16□□□□□ -0.78
SAMMSON-202ENST00000488861 SPOCK2Q92563 424 aa10.15□□□□□ -0.79
SAMMSON-202ENST00000488861 PDS5BQ9NTI5 1447 aa10.14□□□□□ -0.79
SAMMSON-202ENST00000488861 CEP164Q9UPV0 1460 aa10.12□□□□□ -0.79
SAMMSON-202ENST00000488861 FAM212AQ96EL1 285 aa10.12□□□□□ -0.79
SAMMSON-202ENST00000488861 DNMBPQ6XZF7 1577 aa10.11□□□□□ -0.79
SAMMSON-202ENST00000488861 ZNF579Q8NAF0 562 aaKnown RBP10.11□□□□□ -0.79
SAMMSON-202ENST00000488861 ZRANB1Q9UGI0 708 aa10.11□□□□□ -0.79
SAMMSON-202ENST00000488861 RASEFQ8IZ41 740 aa10.1□□□□□ -0.79
SAMMSON-202ENST00000488861 SP7Q8TDD2 431 aaPredicted RBP10.1□□□□□ -0.79
SAMMSON-202ENST00000488861 TOPBP1Q92547 1522 aa10.1□□□□□ -0.79
SAMMSON-202ENST00000488861 FGD5Q6ZNL6 1462 aa10.09□□□□□ -0.79
SAMMSON-202ENST00000488861 EVX2Q03828 476 aa10.09□□□□□ -0.79
SAMMSON-202ENST00000488861 KIF21BO75037 1637 aa10.08□□□□□ -0.8
SAMMSON-202ENST00000488861 KIF27Q86VH2 1401 aa10.08□□□□□ -0.8
SAMMSON-202ENST00000488861 GOLGA3Q08378 1498 aa10.08□□□□□ -0.8
SAMMSON-202ENST00000488861 GSE1Q14687 1217 aa10.07□□□□□ -0.8
SAMMSON-202ENST00000488861 TNIKQ9UKE5 1360 aa10.07□□□□□ -0.8
SAMMSON-202ENST00000488861 URB2Q14146 1524 aaKnown RBP10.07□□□□□ -0.8
SAMMSON-202ENST00000488861 KIF21AQ7Z4S6 1674 aa10.07□□□□□ -0.8
SAMMSON-202ENST00000488861 TSPYL2Q9H2G4 693 aaPredicted RBP10.07□□□□□ -0.8
SAMMSON-202ENST00000488861 CCDC61Q9Y6R9 512 aa10.06□□□□□ -0.8
SAMMSON-202ENST00000488861 POLA1P09884 1462 aaPredicted RBP10.05□□□□□ -0.8
SAMMSON-202ENST00000488861 CUX2O14529 1486 aa10.04□□□□□ -0.8
SAMMSON-202ENST00000488861 PRXQ9BXM0 1461 aa10.04□□□□□ -0.8
SAMMSON-202ENST00000488861 ABCA10Q8WWZ4 1543 aa10.02□□□□□ -0.8
SAMMSON-202ENST00000488861 UBTFP17480 764 aaKnown RBP10.02□□□□□ -0.81
SAMMSON-202ENST00000488861 DCAF8Q5TAQ9 597 aa10.02□□□□□ -0.81
SAMMSON-202ENST00000488861 ERICH3Q5RHP9 1530 aa10.02□□□□□ -0.81
SAMMSON-202ENST00000488861 RAD54L2Q9Y4B4 1467 aa10.02□□□□□ -0.81
SAMMSON-202ENST00000488861 RAPGEF2Q9Y4G8 1499 aa10.02□□□□□ -0.81
SAMMSON-202ENST00000488861 IGF1RP08069 1367 aa10.01□□□□□ -0.81
SAMMSON-202ENST00000488861 MRC2Q9UBG0 1479 aa10□□□□□ -0.81
SAMMSON-202ENST00000488861 CEP162Q5TB80 1403 aa9.99□□□□□ -0.81
SAMMSON-202ENST00000488861 SGIP1Q9BQI5 828 aa9.99□□□□□ -0.81
SAMMSON-202ENST00000488861 WDR97A6NE52 1622 aa9.97□□□□□ -0.81
SAMMSON-202ENST00000488861 GABBR2O75899 941 aa9.97□□□□□ -0.81
SAMMSON-202ENST00000488861 CHRM1P11229 460 aaPredicted RBP9.97□□□□□ -0.81
SAMMSON-202ENST00000488861 KIF12Q96FN5 646 aa9.96□□□□□ -0.82
SAMMSON-202ENST00000488861 PHF12Q96QT6 1004 aa9.96□□□□□ -0.82
SAMMSON-202ENST00000488861 CARMIL1Q5VZK9 1371 aa9.96□□□□□ -0.82
SAMMSON-202ENST00000488861 CIZ1Q9ULV3 898 aaPredicted RBP9.95□□□□□ -0.82
SAMMSON-202ENST00000488861 WDR62O43379 1518 aa9.95□□□□□ -0.82
SAMMSON-202ENST00000488861 TARBP1Q13395 1621 aaKnown RBP9.94□□□□□ -0.82
SAMMSON-202ENST00000488861 ERCC6Q03468 1493 aa9.92□□□□□ -0.82
SAMMSON-202ENST00000488861 ABCA5Q8WWZ7 1642 aa9.92□□□□□ -0.82
SAMMSON-202ENST00000488861 CLIP1P30622 1438 aa9.91□□□□□ -0.82
SAMMSON-202ENST00000488861 GAPVD1Q14C86 1478 aa9.91□□□□□ -0.82
SAMMSON-202ENST00000488861 TDRD9Q8NDG6 1382 aaKnown RBP9.91□□□□□ -0.82
SAMMSON-202ENST00000488861 THOC2Q8NI27 1593 aaKnown RBP9.9□□□□□ -0.82
SAMMSON-202ENST00000488861 MAP3K13O43283 966 aa9.9□□□□□ -0.83
SAMMSON-202ENST00000488861 IFT140Q96RY7 1462 aa9.89□□□□□ -0.83
SAMMSON-202ENST00000488861 CUL7Q14999 1698 aa9.89□□□□□ -0.83
SAMMSON-202ENST00000488861 PYGBP11216 843 aa9.88□□□□□ -0.83
SAMMSON-202ENST00000488861 PCDHB13Q9Y5F0 798 aa9.88□□□□□ -0.83
SAMMSON-202ENST00000488861 GALR2O43603 387 aaPredicted RBP9.87□□□□□ -0.83
SAMMSON-202ENST00000488861 MS4A3Q96HJ5 214 aa9.87□□□□□ -0.83
SAMMSON-202ENST00000488861 TRIM26Q12899 539 aaPredicted RBP9.86□□□□□ -0.83
SAMMSON-202ENST00000488861 ZNF467Q7Z7K2 595 aaPredicted RBP9.86□□□□□ -0.83
SAMMSON-202ENST00000488861 AQRO60306 1485 aaKnown RBP eCLIP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms