RNA–Protein interactions for RNA: ENST00000488861.6

SAMMSON-202, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

TSL 3

Gene SAMMSON, Length 1,433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-202ENST00000488861 AEBP2Q6ZN18 517 aaPredicted RBP19.7■□□□□ 0.74
SAMMSON-202ENST00000488861 CHIC1Q5VXU3 224 aa19.23■□□□□ 0.67
SAMMSON-202ENST00000488861 SENP3Q9H4L4 574 aaPredicted RBP16.87■□□□□ 0.29
SAMMSON-202ENST00000488861 PHF23Q9BUL5 403 aaPredicted RBP16.83■□□□□ 0.28
SAMMSON-202ENST00000488861 PLPPR3Q6T4P5 718 aa15.6■□□□□ 0.09
SAMMSON-202ENST00000488861 FOXD1Q16676 465 aa15.58■□□□□ 0.08
SAMMSON-202ENST00000488861 PPP6R1Q9UPN7 881 aa14.85□□□□□ -0.03
SAMMSON-202ENST00000488861 ADRA2BP18089 450 aa14.83□□□□□ -0.03
SAMMSON-202ENST00000488861 PIAS4Q8N2W9 510 aaPredicted RBP14.67□□□□□ -0.06
SAMMSON-202ENST00000488861 MSH5O43196 834 aa14.51□□□□□ -0.09
SAMMSON-202ENST00000488861 POTEDQ86YR6 584 aa14.17□□□□□ -0.14
SAMMSON-202ENST00000488861 NISCHQ9Y2I1 1504 aa14.16□□□□□ -0.14
SAMMSON-202ENST00000488861 SCAF1Q9H7N4 1312 aaKnown RBP13.74□□□□□ -0.21
SAMMSON-202ENST00000488861 PPP4R3CPQ6ZMV5 832 aa13.68□□□□□ -0.22
SAMMSON-202ENST00000488861 MAPK8IP2Q13387 824 aaPredicted RBP13.47□□□□□ -0.25
SAMMSON-202ENST00000488861 DMRT2Q9Y5R5 561 aa13.43□□□□□ -0.26
SAMMSON-202ENST00000488861 NCBP3Q53F19 620 aaKnown RBP13.38□□□□□ -0.27
SAMMSON-202ENST00000488861 CNKSR2Q8WXI2 1034 aa13.38□□□□□ -0.27
SAMMSON-202ENST00000488861 KCNA4P22459 653 aa13.19□□□□□ -0.3
SAMMSON-202ENST00000488861 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
SAMMSON-202ENST00000488861 HOXD11P31277 338 aaPredicted RBP13.13□□□□□ -0.31
SAMMSON-202ENST00000488861 NPM3O75607 178 aaKnown RBP13.08□□□□□ -0.32
SAMMSON-202ENST00000488861 DNAJC5BQ9UF47 199 aa12.9□□□□□ -0.34
SAMMSON-202ENST00000488861 DCAF8L1A6NGE4 600 aa12.75□□□□□ -0.37
SAMMSON-202ENST00000488861 SLC4A1APQ9BWU0 796 aaKnown RBP12.58□□□□□ -0.4
SAMMSON-202ENST00000488861 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.45□□□□□ -0.42
SAMMSON-202ENST00000488861 RNF39Q9H2S5 420 aa12.37□□□□□ -0.43
SAMMSON-202ENST00000488861 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
SAMMSON-202ENST00000488861 CCDC180Q9P1Z9 1646 aa12.31□□□□□ -0.44
SAMMSON-202ENST00000488861 C1QBPQ07021 282 aaKnown RBP12.28□□□□□ -0.44
SAMMSON-202ENST00000488861 FOXD4L1Q9NU39 408 aa12.25□□□□□ -0.45
SAMMSON-202ENST00000488861 U3KPZ7 1027 aaPredicted RBP12.22□□□□□ -0.45
SAMMSON-202ENST00000488861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.17□□□□□ -0.46
SAMMSON-202ENST00000488861 HNRNPUL2Q1KMD3 747 aaKnown RBP12.17□□□□□ -0.46
SAMMSON-202ENST00000488861 MYCNP04198 464 aaPredicted RBP12.15□□□□□ -0.46
SAMMSON-202ENST00000488861 ZBTB22O15209 634 aa12.1□□□□□ -0.47
SAMMSON-202ENST00000488861 CACNB1Q02641 598 aaPredicted RBP12.1□□□□□ -0.47
SAMMSON-202ENST00000488861 APLP2Q06481 763 aa12.09□□□□□ -0.47
SAMMSON-202ENST00000488861 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
SAMMSON-202ENST00000488861 EHMT2Q96KQ7 1210 aa12□□□□□ -0.49
SAMMSON-202ENST00000488861 CSRNP3Q8WYN3 585 aa11.98□□□□□ -0.49
SAMMSON-202ENST00000488861 ATXN8OSP0DMR3 200 aa11.91□□□□□ -0.5
SAMMSON-202ENST00000488861 ZCCHC6Q5VYS8 1495 aaKnown RBP11.9□□□□□ -0.5
SAMMSON-202ENST00000488861 SPINK5Q9NQ38 1064 aaPredicted RBP11.87□□□□□ -0.51
SAMMSON-202ENST00000488861 ZNF219Q9P2Y4 722 aaPredicted RBP11.87□□□□□ -0.51
SAMMSON-202ENST00000488861 CAPN15O75808 1086 aa11.86□□□□□ -0.51
SAMMSON-202ENST00000488861 TRHP20396 242 aaPredicted RBP11.76□□□□□ -0.53
SAMMSON-202ENST00000488861 DCAF1Q9Y4B6 1507 aa11.72□□□□□ -0.53
SAMMSON-202ENST00000488861 DSG3P32926 999 aa11.72□□□□□ -0.53
SAMMSON-202ENST00000488861 ATF5Q9Y2D1 282 aaPredicted RBP11.7□□□□□ -0.54
SAMMSON-202ENST00000488861 DCAF8L2P0C7V8 631 aa11.64□□□□□ -0.55
SAMMSON-202ENST00000488861 ABCC9O60706 1549 aa11.59□□□□□ -0.55
SAMMSON-202ENST00000488861 MYO15BQ96JP2 1530 aa11.58□□□□□ -0.56
SAMMSON-202ENST00000488861 POLA2Q14181 598 aa11.58□□□□□ -0.56
SAMMSON-202ENST00000488861 ABCB7O75027 752 aa11.57□□□□□ -0.56
SAMMSON-202ENST00000488861 SHROOM4Q9ULL8 1493 aa11.54□□□□□ -0.56
SAMMSON-202ENST00000488861 ZBTB12Q9Y330 459 aaPredicted RBP11.51□□□□□ -0.57
SAMMSON-202ENST00000488861 NACADO15069 1562 aa11.47□□□□□ -0.57
SAMMSON-202ENST00000488861 FBLN2P98095 1184 aa11.35□□□□□ -0.59
SAMMSON-202ENST00000488861 RB1CC1Q8TDY2 1594 aa11.35□□□□□ -0.59
SAMMSON-202ENST00000488861 SCRIBQ14160 1630 aa11.3□□□□□ -0.6
SAMMSON-202ENST00000488861 RBM42Q9BTD8 480 aaKnown RBP11.26□□□□□ -0.61
SAMMSON-202ENST00000488861 MKRN4PQ13434 485 aaPredicted RBP11.23□□□□□ -0.61
SAMMSON-202ENST00000488861 OSCARQ8IYS5 282 aa11.16□□□□□ -0.62
SAMMSON-202ENST00000488861 SPDYE2BA6NHP3 402 aa11.15□□□□□ -0.62
SAMMSON-202ENST00000488861 SPDYE6P0CI01 402 aa11.15□□□□□ -0.62
SAMMSON-202ENST00000488861 SPDYE2Q495Y8 402 aa11.15□□□□□ -0.62
SAMMSON-202ENST00000488861 SUPT5HO00267 1087 aaKnown RBP11.13□□□□□ -0.63
SAMMSON-202ENST00000488861 UNC13AQ9UPW8 1703 aa11.11□□□□□ -0.63
SAMMSON-202ENST00000488861 AKT1S1Q96B36 256 aa11.07□□□□□ -0.64
SAMMSON-202ENST00000488861 BICRAQ9NZM4 1560 aa11.02□□□□□ -0.64
SAMMSON-202ENST00000488861 ZNF692Q9BU19 519 aaPredicted RBP11.02□□□□□ -0.64
SAMMSON-202ENST00000488861 SSUH2Q9Y2M2 353 aa11.01□□□□□ -0.65
SAMMSON-202ENST00000488861 RSF1Q96T23 1441 aaPredicted RBP11.01□□□□□ -0.65
SAMMSON-202ENST00000488861 CECR2Q9BXF3 1484 aa10.99□□□□□ -0.65
SAMMSON-202ENST00000488861 SPDYE4A6NLX3 237 aa10.97□□□□□ -0.65
SAMMSON-202ENST00000488861 PABPN1Q86U42 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
SAMMSON-202ENST00000488861 POTEHQ6S545 545 aa10.94□□□□□ -0.66
SAMMSON-202ENST00000488861 MROH2BQ7Z745 1585 aa10.94□□□□□ -0.66
SAMMSON-202ENST00000488861 BAZ1AQ9NRL2 1556 aaPredicted RBP10.92□□□□□ -0.66
SAMMSON-202ENST00000488861 REM2Q8IYK8 340 aaPredicted RBP10.9□□□□□ -0.66
SAMMSON-202ENST00000488861 SMARCA4P51532 1647 aa10.86□□□□□ -0.67
SAMMSON-202ENST00000488861 WIZO95785 1651 aa10.83□□□□□ -0.68
SAMMSON-202ENST00000488861 FKBP8Q14318 412 aa10.83□□□□□ -0.68
SAMMSON-202ENST00000488861 PROM2Q8N271 834 aa10.83□□□□□ -0.68
SAMMSON-202ENST00000488861 SPDYE1Q8NFV5 336 aaPredicted RBP10.83□□□□□ -0.68
SAMMSON-202ENST00000488861 STAG3Q9UJ98 1225 aa10.77□□□□□ -0.68
SAMMSON-202ENST00000488861 PITPNM1O00562 1244 aa10.76□□□□□ -0.69
SAMMSON-202ENST00000488861 CHRDL2Q6WN34 429 aa10.75□□□□□ -0.69
SAMMSON-202ENST00000488861 PEG3Q9GZU2 1588 aa10.75□□□□□ -0.69
SAMMSON-202ENST00000488861 TOP2AP11388 1531 aaKnown RBP10.73□□□□□ -0.69
SAMMSON-202ENST00000488861 CLEC11AQ9Y240 323 aa10.69□□□□□ -0.7
SAMMSON-202ENST00000488861 ATAD2BQ9ULI0 1458 aa10.69□□□□□ -0.7
SAMMSON-202ENST00000488861 SMARCA2P51531 1590 aa10.68□□□□□ -0.7
SAMMSON-202ENST00000488861 EIF4G1Q04637 1599 aaKnown RBP10.67□□□□□ -0.7
SAMMSON-202ENST00000488861 PRR29P0C7W0 189 aa10.64□□□□□ -0.71
SAMMSON-202ENST00000488861 FXR2P51116 673 aaKnown RBP eCLIP10.63□□□□□ -0.71
SAMMSON-202ENST00000488861 CCDC88BA6NC98 1476 aa10.63□□□□□ -0.71
SAMMSON-202ENST00000488861 BAZ1BQ9UIG0 1483 aaKnown RBP10.61□□□□□ -0.71
SAMMSON-202ENST00000488861 NCAPD3P42695 1498 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms