RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 CFAP43Q8NDM7 1665 aa21.08■□□□□ 0.96
ABCB1-207ENST00000488737 WDR97A6NE52 1622 aa21.07■□□□□ 0.96
ABCB1-207ENST00000488737 RAD54L2Q9Y4B4 1467 aa21.06■□□□□ 0.96
ABCB1-207ENST00000488737 EFCAB5A4FU69 1503 aa21.06■□□□□ 0.96
ABCB1-207ENST00000488737 CTTNBP2Q8WZ74 1663 aa21.05■□□□□ 0.96
ABCB1-207ENST00000488737 SCAF1Q9H7N4 1312 aaKnown RBP21.04■□□□□ 0.96
ABCB1-207ENST00000488737 LRRC9Q6ZRR7 1453 aa21.03■□□□□ 0.96
ABCB1-207ENST00000488737 ACIN1Q9UKV3 1341 aaKnown RBP21■□□□□ 0.95
ABCB1-207ENST00000488737 URB2Q14146 1524 aaKnown RBP21■□□□□ 0.95
ABCB1-207ENST00000488737 PCF11O94913 1555 aaKnown RBP21■□□□□ 0.95
ABCB1-207ENST00000488737 AQRO60306 1485 aaKnown RBP eCLIP20.98■□□□□ 0.95
ABCB1-207ENST00000488737 MRC2Q9UBG0 1479 aa20.98■□□□□ 0.95
ABCB1-207ENST00000488737 CENPBP07199 599 aaPredicted RBP20.98■□□□□ 0.95
ABCB1-207ENST00000488737 THOC2Q8NI27 1593 aaKnown RBP20.97■□□□□ 0.95
ABCB1-207ENST00000488737 FYCO1Q9BQS8 1478 aa20.97■□□□□ 0.95
ABCB1-207ENST00000488737 ABCA5Q8WWZ7 1642 aa20.96■□□□□ 0.95
ABCB1-207ENST00000488737 CASKIN1Q8WXD9 1431 aa20.92■□□□□ 0.94
ABCB1-207ENST00000488737 NEUROD1Q13562 356 aa20.9■□□□□ 0.94
ABCB1-207ENST00000488737 WDR62O43379 1518 aa20.89■□□□□ 0.94
ABCB1-207ENST00000488737 FHOD3Q2V2M9 1422 aa20.88■□□□□ 0.93
ABCB1-207ENST00000488737 PHLDB1Q86UU1 1377 aa20.86■□□□□ 0.93
ABCB1-207ENST00000488737 FMN1Q68DA7 1419 aa20.86■□□□□ 0.93
ABCB1-207ENST00000488737 SAMD9Q5K651 1589 aa20.85■□□□□ 0.93
ABCB1-207ENST00000488737 GAPVD1Q14C86 1478 aa20.85■□□□□ 0.93
ABCB1-207ENST00000488737 RAB3GAP2Q9H2M9 1393 aa20.83■□□□□ 0.92
ABCB1-207ENST00000488737 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.83■□□□□ 0.92
ABCB1-207ENST00000488737 SETD5Q9C0A6 1442 aa20.82■□□□□ 0.92
ABCB1-207ENST00000488737 SNAPC4Q5SXM2 1469 aa20.8■□□□□ 0.92
ABCB1-207ENST00000488737 TARBP1Q13395 1621 aaKnown RBP20.8■□□□□ 0.92
ABCB1-207ENST00000488737 P3H3Q8IVL6 736 aa20.79■□□□□ 0.92
ABCB1-207ENST00000488737 MAPKBP1O60336 1514 aa20.78■□□□□ 0.92
ABCB1-207ENST00000488737 MIER1Q8N108 512 aa20.77■□□□□ 0.92
ABCB1-207ENST00000488737 TDRD9Q8NDG6 1382 aaKnown RBP20.76■□□□□ 0.91
ABCB1-207ENST00000488737 ITGAEP38570 1179 aa20.76■□□□□ 0.91
ABCB1-207ENST00000488737 PBRM1Q86U86 1689 aa20.71■□□□□ 0.91
ABCB1-207ENST00000488737 LRRIQ1Q96JM4 1722 aa20.7■□□□□ 0.9
ABCB1-207ENST00000488737 GRIN2BQ13224 1484 aa20.7■□□□□ 0.9
ABCB1-207ENST00000488737 FAM50AQ14320 339 aaKnown RBP20.69■□□□□ 0.9
ABCB1-207ENST00000488737 ATP1B4Q9UN42 357 aaPredicted RBP20.69■□□□□ 0.9
ABCB1-207ENST00000488737 FGD6Q6ZV73 1430 aa20.67■□□□□ 0.9
ABCB1-207ENST00000488737 PELP1Q8IZL8 1130 aaKnown RBP20.67■□□□□ 0.9
ABCB1-207ENST00000488737 GTF3C3Q9Y5Q9 886 aa20.67■□□□□ 0.9
ABCB1-207ENST00000488737 EHBP1L1Q8N3D4 1523 aa20.64■□□□□ 0.9
ABCB1-207ENST00000488737 IFT140Q96RY7 1462 aa20.64■□□□□ 0.89
ABCB1-207ENST00000488737 SUPT6HQ7KZ85 1726 aaKnown RBP20.64■□□□□ 0.89
ABCB1-207ENST00000488737 MTUS2Q5JR59 1369 aa20.63■□□□□ 0.89
ABCB1-207ENST00000488737 ADAMTS12P58397 1594 aa20.63■□□□□ 0.89
ABCB1-207ENST00000488737 CCDC18Q5T9S5 1454 aa20.61■□□□□ 0.89
ABCB1-207ENST00000488737 TIMELESSQ9UNS1 1208 aa20.6■□□□□ 0.89
ABCB1-207ENST00000488737 IQGAP2Q13576 1575 aa20.59■□□□□ 0.89
ABCB1-207ENST00000488737 NCOA2Q15596 1464 aa20.58■□□□□ 0.88
ABCB1-207ENST00000488737 HECW1Q76N89 1606 aa20.57■□□□□ 0.88
ABCB1-207ENST00000488737 EIF4G3O43432 1585 aaKnown RBP20.57■□□□□ 0.88
ABCB1-207ENST00000488737 MYOM3Q5VTT5 1437 aa20.57■□□□□ 0.88
ABCB1-207ENST00000488737 ZNF608Q9ULD9 1512 aaPredicted RBP20.57■□□□□ 0.88
ABCB1-207ENST00000488737 ARHGEF11O15085 1522 aa20.56■□□□□ 0.88
ABCB1-207ENST00000488737 YTHDC1Q96MU7 727 aaKnown RBP20.56■□□□□ 0.88
ABCB1-207ENST00000488737 UGGT2Q9NYU1 1516 aa20.55■□□□□ 0.88
ABCB1-207ENST00000488737 HFM1A2PYH4 1435 aa20.54■□□□□ 0.88
ABCB1-207ENST00000488737 PTPN23Q9H3S7 1636 aa20.52■□□□□ 0.88
ABCB1-207ENST00000488737 MAGI3Q5TCQ9 1506 aa20.48■□□□□ 0.87
ABCB1-207ENST00000488737 UACAQ9BZF9 1416 aa20.47■□□□□ 0.87
ABCB1-207ENST00000488737 TCOF1Q13428 1488 aaKnown RBP20.47■□□□□ 0.87
ABCB1-207ENST00000488737 PTPRKQ15262 1439 aa20.47■□□□□ 0.87
ABCB1-207ENST00000488737 EPRSP07814 1512 aaKnown RBP20.44■□□□□ 0.86
ABCB1-207ENST00000488737 SIN3AQ96ST3 1273 aa20.44■□□□□ 0.86
ABCB1-207ENST00000488737 NAIPQ13075 1403 aa20.44■□□□□ 0.86
ABCB1-207ENST00000488737 GCC2Q8IWJ2 1684 aa20.42■□□□□ 0.86
ABCB1-207ENST00000488737 AKNAQ7Z591 1439 aa20.41■□□□□ 0.86
ABCB1-207ENST00000488737 KIAA0586Q9BVV6 1533 aa20.39■□□□□ 0.86
ABCB1-207ENST00000488737 MIA2Q96PC5 1412 aa20.39■□□□□ 0.85
ABCB1-207ENST00000488737 PPP1R15AO75807 674 aaPredicted RBP20.37■□□□□ 0.85
ABCB1-207ENST00000488737 KIAA0556O60303 1618 aa20.37■□□□□ 0.85
ABCB1-207ENST00000488737 CDK13Q14004 1512 aaKnown RBP20.34■□□□□ 0.85
ABCB1-207ENST00000488737 GRIN2AQ12879 1464 aa20.32■□□□□ 0.84
ABCB1-207ENST00000488737 DISP1Q96F81 1524 aa20.32■□□□□ 0.84
ABCB1-207ENST00000488737 TONSLQ96HA7 1378 aa20.32■□□□□ 0.84
ABCB1-207ENST00000488737 MAGI1Q96QZ7 1491 aaPredicted RBP20.29■□□□□ 0.84
ABCB1-207ENST00000488737 CHD1O14646 1710 aa20.29■□□□□ 0.84
ABCB1-207ENST00000488737 RAPGEF6Q8TEU7 1601 aa20.29■□□□□ 0.84
ABCB1-207ENST00000488737 NUP153P49790 1475 aaKnown RBP20.24■□□□□ 0.83
ABCB1-207ENST00000488737 KDM5BQ9UGL1 1544 aa20.23■□□□□ 0.83
ABCB1-207ENST00000488737 DNMT1P26358 1616 aaKnown RBP20.22■□□□□ 0.83
ABCB1-207ENST00000488737 SYNJ2O15056 1496 aa20.21■□□□□ 0.83
ABCB1-207ENST00000488737 FBLN2P98095 1184 aa20.21■□□□□ 0.83
ABCB1-207ENST00000488737 ROCK1Q13464 1354 aa20.21■□□□□ 0.83
ABCB1-207ENST00000488737 KDM6BO15054 1643 aa20.19■□□□□ 0.82
ABCB1-207ENST00000488737 DDX10Q13206 875 aaKnown RBP20.19■□□□□ 0.82
ABCB1-207ENST00000488737 DENND4BO75064 1496 aaPredicted RBP20.18■□□□□ 0.82
ABCB1-207ENST00000488737 RRP7BPQ9NSQ0 103 aa20.18■□□□□ 0.82
ABCB1-207ENST00000488737 DAPK1P53355 1430 aa20.18■□□□□ 0.82
ABCB1-207ENST00000488737 CEP170Q5SW79 1584 aa20.18■□□□□ 0.82
ABCB1-207ENST00000488737 CHMP7Q8WUX9 453 aaPredicted RBP20.17■□□□□ 0.82
ABCB1-207ENST00000488737 CDK11AQ9UQ88 783 aaPredicted RBP20.17■□□□□ 0.82
ABCB1-207ENST00000488737 ITSN2Q9NZM3 1697 aa20.16■□□□□ 0.82
ABCB1-207ENST00000488737 ADCY10Q96PN6 1610 aa20.15■□□□□ 0.82
ABCB1-207ENST00000488737 CHIC2Q9UKJ5 165 aa20.15■□□□□ 0.82
ABCB1-207ENST00000488737 CCER2I3L3R5 266 aa20.13■□□□□ 0.81
ABCB1-207ENST00000488737 TROQ12816 1431 aaPredicted RBP20.13■□□□□ 0.81
ABCB1-207ENST00000488737 ABCC5O15440 1437 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms