RNA–Protein interactions for RNA: ENST00000488156.1

ARF4-205, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-205ENST00000488156 IFT140Q96RY7 1462 aa12.27□□□□□ -0.44
ARF4-205ENST00000488156 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
ARF4-205ENST00000488156 ATF5Q9Y2D1 282 aaPredicted RBP12.26□□□□□ -0.45
ARF4-205ENST00000488156 KDM4FA0A1W2PPD8 638 aa12.24□□□□□ -0.45
ARF4-205ENST00000488156 TOPBP1Q92547 1522 aa12.23□□□□□ -0.45
ARF4-205ENST00000488156 FBLN2P98095 1184 aa12.23□□□□□ -0.45
ARF4-205ENST00000488156 EIF4G3O43432 1585 aaKnown RBP12.22□□□□□ -0.45
ARF4-205ENST00000488156 AQRO60306 1485 aaKnown RBP eCLIP12.16□□□□□ -0.46
ARF4-205ENST00000488156 DSG3P32926 999 aa12.16□□□□□ -0.46
ARF4-205ENST00000488156 DNMBPQ6XZF7 1577 aa12.15□□□□□ -0.46
ARF4-205ENST00000488156 PRDM2Q13029 1718 aa12.14□□□□□ -0.47
ARF4-205ENST00000488156 ABCB7O75027 752 aa12.14□□□□□ -0.47
ARF4-205ENST00000488156 SOGA1O94964 1423 aa12.13□□□□□ -0.47
ARF4-205ENST00000488156 CLASP1Q7Z460 1538 aa12.13□□□□□ -0.47
ARF4-205ENST00000488156 POLA2Q14181 598 aa12.12□□□□□ -0.47
ARF4-205ENST00000488156 POLA1P09884 1462 aaPredicted RBP12.11□□□□□ -0.47
ARF4-205ENST00000488156 TDRD9Q8NDG6 1382 aaKnown RBP12.11□□□□□ -0.47
ARF4-205ENST00000488156 FBXO41Q8TF61 875 aa12.11□□□□□ -0.47
ARF4-205ENST00000488156 ERCC6L2Q5T890 1561 aa12.1□□□□□ -0.47
ARF4-205ENST00000488156 GAPVD1Q14C86 1478 aa12.08□□□□□ -0.47
ARF4-205ENST00000488156 LMTK3Q96Q04 1460 aa12.08□□□□□ -0.47
ARF4-205ENST00000488156 RAD54L2Q9Y4B4 1467 aa12.08□□□□□ -0.47
ARF4-205ENST00000488156 CHMP7Q8WUX9 453 aaPredicted RBP12.08□□□□□ -0.48
ARF4-205ENST00000488156 SUPT5HO00267 1087 aaKnown RBP12.07□□□□□ -0.48
ARF4-205ENST00000488156 TARBP1Q13395 1621 aaKnown RBP12.07□□□□□ -0.48
ARF4-205ENST00000488156 KIF13AQ9H1H9 1805 aa12.05□□□□□ -0.48
ARF4-205ENST00000488156 ZBTB12Q9Y330 459 aaPredicted RBP12.05□□□□□ -0.48
ARF4-205ENST00000488156 SYNJ1O43426 1573 aa12.04□□□□□ -0.48
ARF4-205ENST00000488156 HECW2Q9P2P5 1572 aa12.04□□□□□ -0.48
ARF4-205ENST00000488156 FGD5Q6ZNL6 1462 aa12.02□□□□□ -0.48
ARF4-205ENST00000488156 SOCS7O14512 581 aa12.02□□□□□ -0.49
ARF4-205ENST00000488156 GRIN2BQ13224 1484 aa11.99□□□□□ -0.49
ARF4-205ENST00000488156 SNAPC4Q5SXM2 1469 aa11.99□□□□□ -0.49
ARF4-205ENST00000488156 CUX1P39880 1505 aa11.99□□□□□ -0.49
ARF4-205ENST00000488156 MAGI1Q96QZ7 1491 aaPredicted RBP11.97□□□□□ -0.49
ARF4-205ENST00000488156 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
ARF4-205ENST00000488156 ILDR2Q71H61 639 aa11.95□□□□□ -0.5
ARF4-205ENST00000488156 SYNJ2O15056 1496 aa11.94□□□□□ -0.5
ARF4-205ENST00000488156 KDM6BO15054 1643 aa11.93□□□□□ -0.5
ARF4-205ENST00000488156 WRNQ14191 1432 aaPredicted RBP eCLIP11.91□□□□□ -0.5
ARF4-205ENST00000488156 ABCA10Q8WWZ4 1543 aa11.91□□□□□ -0.5
ARF4-205ENST00000488156 ADGRL1O94910 1474 aa11.9□□□□□ -0.5
ARF4-205ENST00000488156 FAM69CQ0P6D2 419 aa11.9□□□□□ -0.5
ARF4-205ENST00000488156 ABCC10Q5T3U5 1492 aa11.86□□□□□ -0.51
ARF4-205ENST00000488156 DISP3Q9P2K9 1392 aa11.83□□□□□ -0.52
ARF4-205ENST00000488156 FHAD1B1AJZ9 1412 aa11.81□□□□□ -0.52
ARF4-205ENST00000488156 GRIN2AQ12879 1464 aa11.81□□□□□ -0.52
ARF4-205ENST00000488156 DIP2BQ9P265 1576 aa11.8□□□□□ -0.52
ARF4-205ENST00000488156 ABCA5Q8WWZ7 1642 aa11.8□□□□□ -0.52
ARF4-205ENST00000488156 NUP160Q12769 1436 aa11.78□□□□□ -0.52
ARF4-205ENST00000488156 JPH4Q96JJ6 628 aa11.78□□□□□ -0.52
ARF4-205ENST00000488156 TOP2BQ02880 1626 aa11.78□□□□□ -0.52
ARF4-205ENST00000488156 TSPOAP1O95153 1857 aa11.77□□□□□ -0.53
ARF4-205ENST00000488156 CEP170Q5SW79 1584 aa11.77□□□□□ -0.53
ARF4-205ENST00000488156 PBRM1Q86U86 1689 aa11.77□□□□□ -0.53
ARF4-205ENST00000488156 MKRN4PQ13434 485 aaPredicted RBP11.75□□□□□ -0.53
ARF4-205ENST00000488156 ERICH3Q5RHP9 1530 aa11.75□□□□□ -0.53
ARF4-205ENST00000488156 MAPKBP1O60336 1514 aa11.73□□□□□ -0.53
ARF4-205ENST00000488156 RBM42Q9BTD8 480 aaKnown RBP11.73□□□□□ -0.53
ARF4-205ENST00000488156 BIVM-ERCC5R4GMW8 1640 aa11.73□□□□□ -0.53
ARF4-205ENST00000488156 ADAMTS12P58397 1594 aa11.72□□□□□ -0.53
ARF4-205ENST00000488156 NPM1P06748 294 aaKnown RBP eCLIP11.71□□□□□ -0.53
ARF4-205ENST00000488156 PRG4Q92954 1404 aaPredicted RBP11.7□□□□□ -0.54
ARF4-205ENST00000488156 IGF1RP08069 1367 aa11.68□□□□□ -0.54
ARF4-205ENST00000488156 SHROOM2Q13796 1616 aa11.68□□□□□ -0.54
ARF4-205ENST00000488156 SPDYE2BA6NHP3 402 aa11.65□□□□□ -0.54
ARF4-205ENST00000488156 SPDYE6P0CI01 402 aa11.65□□□□□ -0.54
ARF4-205ENST00000488156 SPDYE2Q495Y8 402 aa11.65□□□□□ -0.54
ARF4-205ENST00000488156 KIF27Q86VH2 1401 aa11.65□□□□□ -0.54
ARF4-205ENST00000488156 SPATA31D1Q6ZQQ2 1576 aa11.62□□□□□ -0.55
ARF4-205ENST00000488156 KIAA0586Q9BVV6 1533 aa11.61□□□□□ -0.55
ARF4-205ENST00000488156 CARMIL1Q5VZK9 1371 aa11.6□□□□□ -0.55
ARF4-205ENST00000488156 ADCY10Q96PN6 1610 aa11.6□□□□□ -0.55
ARF4-205ENST00000488156 COL17A1Q9UMD9 1497 aaPredicted RBP11.58□□□□□ -0.56
ARF4-205ENST00000488156 SPDYE4A6NLX3 237 aa11.58□□□□□ -0.56
ARF4-205ENST00000488156 ZNF692Q9BU19 519 aaPredicted RBP11.58□□□□□ -0.56
ARF4-205ENST00000488156 PPRC1Q5VV67 1664 aaKnown RBP11.58□□□□□ -0.56
ARF4-205ENST00000488156 PTPRGP23470 1445 aa11.55□□□□□ -0.56
ARF4-205ENST00000488156 FKBP8Q14318 412 aa11.55□□□□□ -0.56
ARF4-205ENST00000488156 CERKQ8TCT0 537 aa11.55□□□□□ -0.56
ARF4-205ENST00000488156 RUSC2Q8N2Y8 1516 aa11.55□□□□□ -0.56
ARF4-205ENST00000488156 TTBK1Q5TCY1 1321 aaPredicted RBP11.54□□□□□ -0.56
ARF4-205ENST00000488156 CARMIL2Q6F5E8 1435 aa11.53□□□□□ -0.56
ARF4-205ENST00000488156 AKT1S1Q96B36 256 aa11.52□□□□□ -0.57
ARF4-205ENST00000488156 TNIKQ9UKE5 1360 aa11.52□□□□□ -0.57
ARF4-205ENST00000488156 CUL7Q14999 1698 aa11.51□□□□□ -0.57
ARF4-205ENST00000488156 SSUH2Q9Y2M2 353 aa11.5□□□□□ -0.57
ARF4-205ENST00000488156 GLI2P10070 1586 aa11.47□□□□□ -0.57
ARF4-205ENST00000488156 PCF11O94913 1555 aaKnown RBP11.46□□□□□ -0.57
ARF4-205ENST00000488156 RAPGEF2Q9Y4G8 1499 aa11.44□□□□□ -0.58
ARF4-205ENST00000488156 PTPRMP28827 1452 aa11.44□□□□□ -0.58
ARF4-205ENST00000488156 UACAQ9BZF9 1416 aa11.43□□□□□ -0.58
ARF4-205ENST00000488156 ABCC2Q92887 1545 aa11.43□□□□□ -0.58
ARF4-205ENST00000488156 PLB1Q6P1J6 1458 aa11.43□□□□□ -0.58
ARF4-205ENST00000488156 TEX14Q8IWB6 1497 aa11.42□□□□□ -0.58
ARF4-205ENST00000488156 ASXL2Q76L83 1435 aa11.42□□□□□ -0.58
ARF4-205ENST00000488156 IQGAP2Q13576 1575 aa11.41□□□□□ -0.58
ARF4-205ENST00000488156 UHRF1BP1LA0JNW5 1464 aa11.41□□□□□ -0.58
ARF4-205ENST00000488156 DISP1Q96F81 1524 aa11.4□□□□□ -0.58
ARF4-205ENST00000488156 KIF21BO75037 1637 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms