RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 DNAJC5BQ9UF47 199 aa3.86□□□□□ -1.79
C9orf72-205ENST00000488117 POLA1P09884 1462 aaPredicted RBP3.86□□□□□ -1.79
C9orf72-205ENST00000488117 FMN1Q68DA7 1419 aa3.86□□□□□ -1.79
C9orf72-205ENST00000488117 RAD54L2Q9Y4B4 1467 aa3.86□□□□□ -1.79
C9orf72-205ENST00000488117 P3H3Q8IVL6 736 aa3.86□□□□□ -1.79
C9orf72-205ENST00000488117 MAP3K1Q13233 1512 aa3.86□□□□□ -1.79
C9orf72-205ENST00000488117 NESP48681 1621 aa3.85□□□□□ -1.79
C9orf72-205ENST00000488117 RRBP1Q9P2E9 1410 aaKnown RBP3.85□□□□□ -1.79
C9orf72-205ENST00000488117 TIAM1Q13009 1591 aa3.85□□□□□ -1.79
C9orf72-205ENST00000488117 KANK4Q5T7N3 995 aaPredicted RBP3.84□□□□□ -1.79
C9orf72-205ENST00000488117 GAPVD1Q14C86 1478 aa3.84□□□□□ -1.79
C9orf72-205ENST00000488117 FYCO1Q9BQS8 1478 aa3.84□□□□□ -1.79
C9orf72-205ENST00000488117 CTTNBP2Q8WZ74 1663 aa3.84□□□□□ -1.8
C9orf72-205ENST00000488117 MTUS2Q5JR59 1369 aa3.83□□□□□ -1.8
C9orf72-205ENST00000488117 LRRC9Q6ZRR7 1453 aa3.83□□□□□ -1.8
C9orf72-205ENST00000488117 MRC2Q9UBG0 1479 aa3.83□□□□□ -1.8
C9orf72-205ENST00000488117 CASKIN1Q8WXD9 1431 aa3.83□□□□□ -1.8
C9orf72-205ENST00000488117 URB2Q14146 1524 aaKnown RBP3.83□□□□□ -1.8
C9orf72-205ENST00000488117 AQRO60306 1485 aaKnown RBP eCLIP3.83□□□□□ -1.8
C9orf72-205ENST00000488117 FHOD3Q2V2M9 1422 aa3.83□□□□□ -1.8
C9orf72-205ENST00000488117 TDRD9Q8NDG6 1382 aaKnown RBP3.82□□□□□ -1.8
C9orf72-205ENST00000488117 CFAP43Q8NDM7 1665 aa3.82□□□□□ -1.8
C9orf72-205ENST00000488117 PCF11O94913 1555 aaKnown RBP3.82□□□□□ -1.8
C9orf72-205ENST00000488117 SETD5Q9C0A6 1442 aa3.82□□□□□ -1.8
C9orf72-205ENST00000488117 ERCC6Q03468 1493 aa3.82□□□□□ -1.8
C9orf72-205ENST00000488117 DHX57Q6P158 1386 aaKnown RBP3.81□□□□□ -1.8
C9orf72-205ENST00000488117 CCDC18Q5T9S5 1454 aa3.81□□□□□ -1.8
C9orf72-205ENST00000488117 ACIN1Q9UKV3 1341 aaKnown RBP3.81□□□□□ -1.8
C9orf72-205ENST00000488117 WDR97A6NE52 1622 aa3.81□□□□□ -1.8
C9orf72-205ENST00000488117 ABCA5Q8WWZ7 1642 aa3.81□□□□□ -1.8
C9orf72-205ENST00000488117 KIF21AQ7Z4S6 1674 aa3.81□□□□□ -1.8
C9orf72-205ENST00000488117 IFT140Q96RY7 1462 aa3.81□□□□□ -1.8
C9orf72-205ENST00000488117 THOC2Q8NI27 1593 aaKnown RBP3.8□□□□□ -1.8
C9orf72-205ENST00000488117 CDK11AQ9UQ88 783 aaPredicted RBP3.8□□□□□ -1.8
C9orf72-205ENST00000488117 GRIN2BQ13224 1484 aa3.8□□□□□ -1.8
C9orf72-205ENST00000488117 EHBP1L1Q8N3D4 1523 aa3.8□□□□□ -1.8
C9orf72-205ENST00000488117 YTHDC1Q96MU7 727 aaKnown RBP3.8□□□□□ -1.8
C9orf72-205ENST00000488117 HECW1Q76N89 1606 aa3.8□□□□□ -1.8
C9orf72-205ENST00000488117 RAB3GAP2Q9H2M9 1393 aa3.8□□□□□ -1.8
C9orf72-205ENST00000488117 PELP1Q8IZL8 1130 aaKnown RBP3.79□□□□□ -1.8
C9orf72-205ENST00000488117 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.79□□□□□ -1.8
C9orf72-205ENST00000488117 PBRM1Q86U86 1689 aa3.79□□□□□ -1.8
C9orf72-205ENST00000488117 NEUROD1Q13562 356 aa3.79□□□□□ -1.8
C9orf72-205ENST00000488117 PHLDB1Q86UU1 1377 aa3.79□□□□□ -1.8
C9orf72-205ENST00000488117 TIMELESSQ9UNS1 1208 aa3.78□□□□□ -1.8
C9orf72-205ENST00000488117 SUPT6HQ7KZ85 1726 aaKnown RBP3.78□□□□□ -1.8
C9orf72-205ENST00000488117 IQGAP2Q13576 1575 aa3.78□□□□□ -1.8
C9orf72-205ENST00000488117 FGD6Q6ZV73 1430 aa3.78□□□□□ -1.8
C9orf72-205ENST00000488117 ADAMTS12P58397 1594 aa3.78□□□□□ -1.8
C9orf72-205ENST00000488117 SAMD9Q5K651 1589 aa3.78□□□□□ -1.8
C9orf72-205ENST00000488117 CHMP7Q8WUX9 453 aaPredicted RBP3.78□□□□□ -1.8
C9orf72-205ENST00000488117 TONSLQ96HA7 1378 aa3.78□□□□□ -1.8
C9orf72-205ENST00000488117 MYOM3Q5VTT5 1437 aa3.77□□□□□ -1.81
C9orf72-205ENST00000488117 TRIM52Q96A61 297 aa3.77□□□□□ -1.81
C9orf72-205ENST00000488117 TARBP1Q13395 1621 aaKnown RBP3.77□□□□□ -1.81
C9orf72-205ENST00000488117 FBLN2P98095 1184 aa3.77□□□□□ -1.81
C9orf72-205ENST00000488117 NCOA2Q15596 1464 aa3.77□□□□□ -1.81
C9orf72-205ENST00000488117 WDR62O43379 1518 aa3.76□□□□□ -1.81
C9orf72-205ENST00000488117 CARMIL2Q6F5E8 1435 aa3.76□□□□□ -1.81
C9orf72-205ENST00000488117 SNAPC4Q5SXM2 1469 aa3.76□□□□□ -1.81
C9orf72-205ENST00000488117 MIER1Q8N108 512 aa3.75□□□□□ -1.81
C9orf72-205ENST00000488117 KIAA0586Q9BVV6 1533 aa3.75□□□□□ -1.81
C9orf72-205ENST00000488117 MAGI1Q96QZ7 1491 aaPredicted RBP3.75□□□□□ -1.81
C9orf72-205ENST00000488117 GTF3C3Q9Y5Q9 886 aa3.75□□□□□ -1.81
C9orf72-205ENST00000488117 SCAF1Q9H7N4 1312 aaKnown RBP3.75□□□□□ -1.81
C9orf72-205ENST00000488117 UGGT2Q9NYU1 1516 aa3.74□□□□□ -1.81
C9orf72-205ENST00000488117 PTPN23Q9H3S7 1636 aa3.74□□□□□ -1.81
C9orf72-205ENST00000488117 ARID3CA6NKF2 412 aa3.74□□□□□ -1.81
C9orf72-205ENST00000488117 MIA2Q96PC5 1412 aa3.74□□□□□ -1.81
C9orf72-205ENST00000488117 EPRSP07814 1512 aaKnown RBP3.74□□□□□ -1.81
C9orf72-205ENST00000488117 GRIN2AQ12879 1464 aa3.74□□□□□ -1.81
C9orf72-205ENST00000488117 PIAS4Q8N2W9 510 aaPredicted RBP3.74□□□□□ -1.81
C9orf72-205ENST00000488117 HFM1A2PYH4 1435 aa3.74□□□□□ -1.81
C9orf72-205ENST00000488117 UACAQ9BZF9 1416 aa3.74□□□□□ -1.81
C9orf72-205ENST00000488117 ANP32CO43423 234 aa3.73□□□□□ -1.81
C9orf72-205ENST00000488117 CHIC2Q9UKJ5 165 aa3.73□□□□□ -1.81
C9orf72-205ENST00000488117 EIF4G3O43432 1585 aaKnown RBP3.73□□□□□ -1.81
C9orf72-205ENST00000488117 SYNJ2O15056 1496 aa3.73□□□□□ -1.81
C9orf72-205ENST00000488117 KIAA0556O60303 1618 aa3.73□□□□□ -1.81
C9orf72-205ENST00000488117 RRP7BPQ9NSQ0 103 aa3.73□□□□□ -1.81
C9orf72-205ENST00000488117 SIN3AQ96ST3 1273 aa3.73□□□□□ -1.81
C9orf72-205ENST00000488117 RAPGEF6Q8TEU7 1601 aa3.72□□□□□ -1.81
C9orf72-205ENST00000488117 TCOF1Q13428 1488 aaKnown RBP3.72□□□□□ -1.81
C9orf72-205ENST00000488117 MAPKBP1O60336 1514 aa3.72□□□□□ -1.81
C9orf72-205ENST00000488117 PLEKHD1A6NEE1 506 aa3.72□□□□□ -1.81
C9orf72-205ENST00000488117 ZNF608Q9ULD9 1512 aaPredicted RBP3.72□□□□□ -1.81
C9orf72-205ENST00000488117 CFDP1Q9UEE9 299 aaPredicted RBP3.72□□□□□ -1.81
C9orf72-205ENST00000488117 ZNF777Q9ULD5 760 aaPredicted RBP3.72□□□□□ -1.81
C9orf72-205ENST00000488117 CDK13Q14004 1512 aaKnown RBP3.72□□□□□ -1.81
C9orf72-205ENST00000488117 NEFLP07196 543 aa3.72□□□□□ -1.81
C9orf72-205ENST00000488117 AKNAQ7Z591 1439 aa3.71□□□□□ -1.81
C9orf72-205ENST00000488117 PPP1R15AO75807 674 aaPredicted RBP3.71□□□□□ -1.82
C9orf72-205ENST00000488117 ITSN2Q9NZM3 1697 aa3.71□□□□□ -1.82
C9orf72-205ENST00000488117 FOXD1Q16676 465 aa3.7□□□□□ -1.82
C9orf72-205ENST00000488117 NAIPQ13075 1403 aa3.7□□□□□ -1.82
C9orf72-205ENST00000488117 DDX10Q13206 875 aaKnown RBP3.7□□□□□ -1.82
C9orf72-205ENST00000488117 PLPPR3Q6T4P5 718 aa3.7□□□□□ -1.82
C9orf72-205ENST00000488117 GCC2Q8IWJ2 1684 aa3.7□□□□□ -1.82
C9orf72-205ENST00000488117 TROQ12816 1431 aaPredicted RBP3.7□□□□□ -1.82
C9orf72-205ENST00000488117 ROCK1Q13464 1354 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms