RNA–Protein interactions for RNA: ENST00000487540.6

CSF3R-212, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 5

Gene CSF3R, Length 1,931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-212ENST00000487540 LRRC9Q6ZRR7 1453 aa23.08■■□□□ 1.29
CSF3R-212ENST00000487540 CFAP43Q8NDM7 1665 aa23.08■■□□□ 1.29
CSF3R-212ENST00000487540 TOPBP1Q92547 1522 aa23.07■■□□□ 1.28
CSF3R-212ENST00000487540 FHAD1B1AJZ9 1412 aa23.05■■□□□ 1.28
CSF3R-212ENST00000487540 ABCA10Q8WWZ4 1543 aa23.04■■□□□ 1.28
CSF3R-212ENST00000487540 YTHDC1Q96MU7 727 aaKnown RBP23.02■■□□□ 1.28
CSF3R-212ENST00000487540 MAPKBP1O60336 1514 aa23■■□□□ 1.27
CSF3R-212ENST00000487540 RAB3GAP2Q9H2M9 1393 aa22.99■■□□□ 1.27
CSF3R-212ENST00000487540 POLA1P09884 1462 aaPredicted RBP22.98■■□□□ 1.27
CSF3R-212ENST00000487540 EFCAB5A4FU69 1503 aa22.98■■□□□ 1.27
CSF3R-212ENST00000487540 PCF11O94913 1555 aaKnown RBP22.98■■□□□ 1.27
CSF3R-212ENST00000487540 URB2Q14146 1524 aaKnown RBP22.97■■□□□ 1.27
CSF3R-212ENST00000487540 CUL7Q14999 1698 aa22.96■■□□□ 1.27
CSF3R-212ENST00000487540 AQRO60306 1485 aaKnown RBP eCLIP22.96■■□□□ 1.27
CSF3R-212ENST00000487540 SETD5Q9C0A6 1442 aa22.96■■□□□ 1.27
CSF3R-212ENST00000487540 PHLDB1Q86UU1 1377 aa22.96■■□□□ 1.27
CSF3R-212ENST00000487540 FYCO1Q9BQS8 1478 aa22.92■■□□□ 1.26
CSF3R-212ENST00000487540 RAD54L2Q9Y4B4 1467 aa22.92■■□□□ 1.26
CSF3R-212ENST00000487540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.91■■□□□ 1.26
CSF3R-212ENST00000487540 CTTNBP2Q8WZ74 1663 aa22.91■■□□□ 1.26
CSF3R-212ENST00000487540 CASKIN1Q8WXD9 1431 aa22.9■■□□□ 1.26
CSF3R-212ENST00000487540 KIF21AQ7Z4S6 1674 aa22.89■■□□□ 1.26
CSF3R-212ENST00000487540 WDR97A6NE52 1622 aa22.89■■□□□ 1.25
CSF3R-212ENST00000487540 ITGAEP38570 1179 aa22.85■■□□□ 1.25
CSF3R-212ENST00000487540 FHOD3Q2V2M9 1422 aa22.83■■□□□ 1.25
CSF3R-212ENST00000487540 TIMELESSQ9UNS1 1208 aa22.8■■□□□ 1.24
CSF3R-212ENST00000487540 MRC2Q9UBG0 1479 aa22.78■■□□□ 1.24
CSF3R-212ENST00000487540 ABCA5Q8WWZ7 1642 aa22.77■■□□□ 1.24
CSF3R-212ENST00000487540 SNAPC4Q5SXM2 1469 aa22.76■■□□□ 1.23
CSF3R-212ENST00000487540 FMN1Q68DA7 1419 aa22.76■■□□□ 1.23
CSF3R-212ENST00000487540 SAMD9Q5K651 1589 aa22.76■■□□□ 1.23
CSF3R-212ENST00000487540 P3H3Q8IVL6 736 aa22.75■■□□□ 1.23
CSF3R-212ENST00000487540 FAM50AQ14320 339 aaKnown RBP22.72■■□□□ 1.23
CSF3R-212ENST00000487540 FGD6Q6ZV73 1430 aa22.69■■□□□ 1.22
CSF3R-212ENST00000487540 TDRD9Q8NDG6 1382 aaKnown RBP22.69■■□□□ 1.22
CSF3R-212ENST00000487540 LRRIQ1Q96JM4 1722 aa22.68■■□□□ 1.22
CSF3R-212ENST00000487540 GAPVD1Q14C86 1478 aa22.68■■□□□ 1.22
CSF3R-212ENST00000487540 THOC2Q8NI27 1593 aaKnown RBP22.68■■□□□ 1.22
CSF3R-212ENST00000487540 TARBP1Q13395 1621 aaKnown RBP22.67■■□□□ 1.22
CSF3R-212ENST00000487540 GRIN2BQ13224 1484 aa22.65■■□□□ 1.22
CSF3R-212ENST00000487540 SIN3AQ96ST3 1273 aa22.65■■□□□ 1.22
CSF3R-212ENST00000487540 WDR62O43379 1518 aa22.62■■□□□ 1.21
CSF3R-212ENST00000487540 ATP1B4Q9UN42 357 aaPredicted RBP22.61■■□□□ 1.21
CSF3R-212ENST00000487540 PPP1R15AO75807 674 aaPredicted RBP22.6■■□□□ 1.21
CSF3R-212ENST00000487540 HFM1A2PYH4 1435 aa22.59■■□□□ 1.21
CSF3R-212ENST00000487540 ERCC6Q03468 1493 aa22.59■■□□□ 1.21
CSF3R-212ENST00000487540 PTPN23Q9H3S7 1636 aa22.57■■□□□ 1.2
CSF3R-212ENST00000487540 PTPRKQ15262 1439 aa22.57■■□□□ 1.2
CSF3R-212ENST00000487540 ARHGEF11O15085 1522 aa22.56■■□□□ 1.2
CSF3R-212ENST00000487540 MTUS2Q5JR59 1369 aa22.56■■□□□ 1.2
CSF3R-212ENST00000487540 IFT140Q96RY7 1462 aa22.56■■□□□ 1.2
CSF3R-212ENST00000487540 SUPT6HQ7KZ85 1726 aaKnown RBP22.55■■□□□ 1.2
CSF3R-212ENST00000487540 NCOA2Q15596 1464 aa22.55■■□□□ 1.2
CSF3R-212ENST00000487540 EHBP1L1Q8N3D4 1523 aa22.55■■□□□ 1.2
CSF3R-212ENST00000487540 CCDC18Q5T9S5 1454 aa22.55■■□□□ 1.2
CSF3R-212ENST00000487540 MYOM3Q5VTT5 1437 aa22.54■■□□□ 1.2
CSF3R-212ENST00000487540 UACAQ9BZF9 1416 aa22.54■■□□□ 1.2
CSF3R-212ENST00000487540 SUPT16HQ9Y5B9 1047 aaKnown RBP22.54■■□□□ 1.2
CSF3R-212ENST00000487540 UGGT2Q9NYU1 1516 aa22.51■■□□□ 1.19
CSF3R-212ENST00000487540 NAIPQ13075 1403 aa22.5■■□□□ 1.19
CSF3R-212ENST00000487540 TCOF1Q13428 1488 aaKnown RBP22.47■■□□□ 1.19
CSF3R-212ENST00000487540 KCNH8Q96L42 1107 aa22.46■■□□□ 1.19
CSF3R-212ENST00000487540 DDX10Q13206 875 aaKnown RBP22.45■■□□□ 1.18
CSF3R-212ENST00000487540 PBRM1Q86U86 1689 aa22.45■■□□□ 1.18
CSF3R-212ENST00000487540 MAGI3Q5TCQ9 1506 aa22.44■■□□□ 1.18
CSF3R-212ENST00000487540 MYT1Q01538 1121 aa22.42■■□□□ 1.18
CSF3R-212ENST00000487540 CCER2I3L3R5 266 aa22.41■■□□□ 1.18
CSF3R-212ENST00000487540 KDM5BQ9UGL1 1544 aa22.41■■□□□ 1.18
CSF3R-212ENST00000487540 GCC2Q8IWJ2 1684 aa22.41■■□□□ 1.18
CSF3R-212ENST00000487540 HECW1Q76N89 1606 aa22.4■■□□□ 1.18
CSF3R-212ENST00000487540 ZNF608Q9ULD9 1512 aaPredicted RBP22.4■■□□□ 1.18
CSF3R-212ENST00000487540 AKNAQ7Z591 1439 aa22.4■■□□□ 1.18
CSF3R-212ENST00000487540 TONSLQ96HA7 1378 aa22.39■■□□□ 1.17
CSF3R-212ENST00000487540 ADAMTS12P58397 1594 aa22.38■■□□□ 1.17
CSF3R-212ENST00000487540 IQGAP2Q13576 1575 aa22.37■■□□□ 1.17
CSF3R-212ENST00000487540 EPRSP07814 1512 aaKnown RBP22.33■■□□□ 1.16
CSF3R-212ENST00000487540 MIA2Q96PC5 1412 aa22.32■■□□□ 1.16
CSF3R-212ENST00000487540 DENND4BO75064 1496 aaPredicted RBP22.31■■□□□ 1.16
CSF3R-212ENST00000487540 EIF4G3O43432 1585 aaKnown RBP22.29■■□□□ 1.16
CSF3R-212ENST00000487540 ANP32CO43423 234 aa22.26■■□□□ 1.15
CSF3R-212ENST00000487540 HIRIP3Q9BW71 556 aaPredicted RBP22.25■■□□□ 1.15
CSF3R-212ENST00000487540 KDM6BO15054 1643 aa22.23■■□□□ 1.15
CSF3R-212ENST00000487540 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
CSF3R-212ENST00000487540 CDK13Q14004 1512 aaKnown RBP22.21■■□□□ 1.15
CSF3R-212ENST00000487540 TSHZ2Q9NRE2 1034 aa22.18■■□□□ 1.14
CSF3R-212ENST00000487540 RRP7BPQ9NSQ0 103 aa22.18■■□□□ 1.14
CSF3R-212ENST00000487540 GRIN2AQ12879 1464 aa22.17■■□□□ 1.14
CSF3R-212ENST00000487540 ROCK1Q13464 1354 aa22.17■■□□□ 1.14
CSF3R-212ENST00000487540 KIAA0586Q9BVV6 1533 aa22.16■■□□□ 1.14
CSF3R-212ENST00000487540 SYNJ2O15056 1496 aa22.14■■□□□ 1.13
CSF3R-212ENST00000487540 DISP1Q96F81 1524 aa22.14■■□□□ 1.13
CSF3R-212ENST00000487540 KIAA0556O60303 1618 aa22.14■■□□□ 1.13
CSF3R-212ENST00000487540 DNMT1P26358 1616 aaKnown RBP22.13■■□□□ 1.13
CSF3R-212ENST00000487540 CHMP7Q8WUX9 453 aaPredicted RBP22.12■■□□□ 1.13
CSF3R-212ENST00000487540 MPHOSPH9Q99550 1183 aa22.12■■□□□ 1.13
CSF3R-212ENST00000487540 CHIC2Q9UKJ5 165 aa22.12■■□□□ 1.13
CSF3R-212ENST00000487540 DAPK1P53355 1430 aa22.1■■□□□ 1.13
CSF3R-212ENST00000487540 NUP153P49790 1475 aaKnown RBP22.08■■□□□ 1.13
CSF3R-212ENST00000487540 FKBP8Q14318 412 aa22.08■■□□□ 1.13
CSF3R-212ENST00000487540 RAPGEF6Q8TEU7 1601 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms