RNA–Protein interactions for RNA: ENST00000487279.6

IFFO1-209, Transcript of intermediate filament family orphan 1, humanhuman

TSL 1 (best)

Gene IFFO1, Length 2,786 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-209ENST00000487279 ERICH6Q7L0X2 663 aa23.24■■□□□ 1.31
IFFO1-209ENST00000487279 RRBP1Q9P2E9 1410 aaKnown RBP23.24■■□□□ 1.31
IFFO1-209ENST00000487279 CCNB3Q8WWL7 1395 aa23.22■■□□□ 1.31
IFFO1-209ENST00000487279 RAB3GAP2Q9H2M9 1393 aa23.22■■□□□ 1.31
IFFO1-209ENST00000487279 CC2D2AQ9P2K1 1620 aa23.22■■□□□ 1.31
IFFO1-209ENST00000487279 PPP1R15AO75807 674 aaPredicted RBP23.22■■□□□ 1.31
IFFO1-209ENST00000487279 WDR97A6NE52 1622 aa23.2■■□□□ 1.3
IFFO1-209ENST00000487279 MAPKBP1O60336 1514 aa23.19■■□□□ 1.3
IFFO1-209ENST00000487279 CUX2O14529 1486 aa23.19■■□□□ 1.3
IFFO1-209ENST00000487279 CADPSQ9ULU8 1353 aa23.18■■□□□ 1.3
IFFO1-209ENST00000487279 PRDM2Q13029 1718 aa23.17■■□□□ 1.3
IFFO1-209ENST00000487279 ANP32CO43423 234 aa23.17■■□□□ 1.3
IFFO1-209ENST00000487279 DNAJC5BQ9UF47 199 aa23.14■■□□□ 1.29
IFFO1-209ENST00000487279 FANCIQ9NVI1 1328 aa23.12■■□□□ 1.29
IFFO1-209ENST00000487279 FGD5Q6ZNL6 1462 aa23.12■■□□□ 1.29
IFFO1-209ENST00000487279 CDK11AQ9UQ88 783 aaPredicted RBP23.12■■□□□ 1.29
IFFO1-209ENST00000487279 CCER2I3L3R5 266 aa23.1■■□□□ 1.29
IFFO1-209ENST00000487279 ARHGAP35Q9NRY4 1499 aa23.09■■□□□ 1.29
IFFO1-209ENST00000487279 P3H3Q8IVL6 736 aa23.09■■□□□ 1.29
IFFO1-209ENST00000487279 IGF1RP08069 1367 aa23.08■■□□□ 1.29
IFFO1-209ENST00000487279 NESP48681 1621 aa23.07■■□□□ 1.28
IFFO1-209ENST00000487279 PRKCSHP14314 528 aaPredicted RBP23.03■■□□□ 1.28
IFFO1-209ENST00000487279 HNRNPUQ00839 825 aaKnown RBP eCLIP23.03■■□□□ 1.28
IFFO1-209ENST00000487279 DEKP35659 375 aaKnown RBP23.01■■□□□ 1.27
IFFO1-209ENST00000487279 FANCD2Q9BXW9 1451 aa23.01■■□□□ 1.27
IFFO1-209ENST00000487279 RAD54L2Q9Y4B4 1467 aa23■■□□□ 1.27
IFFO1-209ENST00000487279 SETD5Q9C0A6 1442 aa22.99■■□□□ 1.27
IFFO1-209ENST00000487279 CARMIL1Q5VZK9 1371 aa22.99■■□□□ 1.27
IFFO1-209ENST00000487279 FAM50AQ14320 339 aaKnown RBP22.98■■□□□ 1.27
IFFO1-209ENST00000487279 ATP1B4Q9UN42 357 aaPredicted RBP22.95■■□□□ 1.26
IFFO1-209ENST00000487279 NBR1Q14596 966 aa22.9■■□□□ 1.26
IFFO1-209ENST00000487279 B4GALNT3Q6L9W6 998 aa22.85■■□□□ 1.25
IFFO1-209ENST00000487279 POLA1P09884 1462 aaPredicted RBP22.85■■□□□ 1.25
IFFO1-209ENST00000487279 TOPBP1Q92547 1522 aa22.84■■□□□ 1.25
IFFO1-209ENST00000487279 PHLDB1Q86UU1 1377 aa22.83■■□□□ 1.25
IFFO1-209ENST00000487279 DNMBPQ6XZF7 1577 aa22.82■■□□□ 1.24
IFFO1-209ENST00000487279 PPP4R2Q9NY27 417 aa22.8■■□□□ 1.24
IFFO1-209ENST00000487279 MYT1LQ9UL68 1186 aa22.79■■□□□ 1.24
IFFO1-209ENST00000487279 TIMELESSQ9UNS1 1208 aa22.79■■□□□ 1.24
IFFO1-209ENST00000487279 PAK3O75914 559 aaPredicted RBP22.79■■□□□ 1.24
IFFO1-209ENST00000487279 FHOD3Q2V2M9 1422 aa22.78■■□□□ 1.24
IFFO1-209ENST00000487279 ANO8Q9HCE9 1232 aaPredicted RBP22.77■■□□□ 1.24
IFFO1-209ENST00000487279 TIAM1Q13009 1591 aa22.77■■□□□ 1.24
IFFO1-209ENST00000487279 TONSLQ96HA7 1378 aa22.76■■□□□ 1.23
IFFO1-209ENST00000487279 NOP58Q9Y2X3 529 aaKnown RBP22.74■■□□□ 1.23
IFFO1-209ENST00000487279 CCDC184Q52MB2 194 aa22.74■■□□□ 1.23
IFFO1-209ENST00000487279 PCF11O94913 1555 aaKnown RBP22.74■■□□□ 1.23
IFFO1-209ENST00000487279 URB2Q14146 1524 aaKnown RBP22.73■■□□□ 1.23
IFFO1-209ENST00000487279 ABCA10Q8WWZ4 1543 aa22.73■■□□□ 1.23
IFFO1-209ENST00000487279 TDRD9Q8NDG6 1382 aaKnown RBP22.73■■□□□ 1.23
IFFO1-209ENST00000487279 LRRC9Q6ZRR7 1453 aa22.69■■□□□ 1.22
IFFO1-209ENST00000487279 FAM9BQ8IZU0 186 aa22.67■■□□□ 1.22
IFFO1-209ENST00000487279 ERICH6BQ5W0A0 696 aa22.64■■□□□ 1.22
IFFO1-209ENST00000487279 WASHC2AQ641Q2 1341 aa22.61■■□□□ 1.21
IFFO1-209ENST00000487279 SALL2Q9Y467 1007 aaPredicted RBP22.6■■□□□ 1.21
IFFO1-209ENST00000487279 FHAD1B1AJZ9 1412 aa22.59■■□□□ 1.21
IFFO1-209ENST00000487279 KIF21AQ7Z4S6 1674 aa22.59■■□□□ 1.21
IFFO1-209ENST00000487279 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
IFFO1-209ENST00000487279 CFAP43Q8NDM7 1665 aa22.58■■□□□ 1.21
IFFO1-209ENST00000487279 CTTNBP2Q8WZ74 1663 aa22.58■■□□□ 1.2
IFFO1-209ENST00000487279 HSPA5P11021 654 aaKnown RBP22.56■■□□□ 1.2
IFFO1-209ENST00000487279 CUL7Q14999 1698 aa22.56■■□□□ 1.2
IFFO1-209ENST00000487279 RTN4Q9NQC3 1192 aaKnown RBP22.55■■□□□ 1.2
IFFO1-209ENST00000487279 MAP3K1Q13233 1512 aa22.55■■□□□ 1.2
IFFO1-209ENST00000487279 IL27Q8NEV9 243 aa22.53■■□□□ 1.2
IFFO1-209ENST00000487279 MRS2Q9HD23 443 aa22.53■■□□□ 1.2
IFFO1-209ENST00000487279 ARID3CA6NKF2 412 aa22.52■■□□□ 1.2
IFFO1-209ENST00000487279 RTL5Q5HYW3 569 aaPredicted RBP22.52■■□□□ 1.2
IFFO1-209ENST00000487279 GAPVD1Q14C86 1478 aa22.51■■□□□ 1.19
IFFO1-209ENST00000487279 CCDC136Q96JN2 1154 aa22.51■■□□□ 1.19
IFFO1-209ENST00000487279 SENP3-EIF4A1A0A087X0R7 540 aa22.5■■□□□ 1.19
IFFO1-209ENST00000487279 ABCA5Q8WWZ7 1642 aa22.5■■□□□ 1.19
IFFO1-209ENST00000487279 CNGB1Q14028 1251 aaPredicted RBP22.48■■□□□ 1.19
IFFO1-209ENST00000487279 CCDC18Q5T9S5 1454 aa22.48■■□□□ 1.19
IFFO1-209ENST00000487279 FYCO1Q9BQS8 1478 aa22.48■■□□□ 1.19
IFFO1-209ENST00000487279 ANP32AP39687 249 aaKnown RBP22.48■■□□□ 1.19
IFFO1-209ENST00000487279 PDS5BQ9NTI5 1447 aa22.47■■□□□ 1.19
IFFO1-209ENST00000487279 IPO9Q96P70 1041 aaKnown RBP22.47■■□□□ 1.19
IFFO1-209ENST00000487279 CASKIN1Q8WXD9 1431 aa22.47■■□□□ 1.19
IFFO1-209ENST00000487279 EFCAB5A4FU69 1503 aa22.46■■□□□ 1.19
IFFO1-209ENST00000487279 ZBTB47Q9UFB7 747 aaPredicted RBP22.46■■□□□ 1.19
IFFO1-209ENST00000487279 PRKRIP1Q9H875 184 aaPredicted RBP22.45■■□□□ 1.19
IFFO1-209ENST00000487279 ZBED9Q6R2W3 1325 aa22.45■■□□□ 1.18
IFFO1-209ENST00000487279 C11orf95C9JLR9 678 aaPredicted RBP22.45■■□□□ 1.18
IFFO1-209ENST00000487279 LRRIQ1Q96JM4 1722 aa22.44■■□□□ 1.18
IFFO1-209ENST00000487279 AKNAQ7Z591 1439 aa22.43■■□□□ 1.18
IFFO1-209ENST00000487279 SNAPC4Q5SXM2 1469 aa22.42■■□□□ 1.18
IFFO1-209ENST00000487279 EIF4G2P78344 907 aaKnown RBP eCLIP22.41■■□□□ 1.18
IFFO1-209ENST00000487279 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.184e-8■■■■□ 24.3
IFFO1-209ENST00000487279 PTPRKQ15262 1439 aa22.4■■□□□ 1.18
IFFO1-209ENST00000487279 UACAQ9BZF9 1416 aa22.4■■□□□ 1.18
IFFO1-209ENST00000487279 KDM5BQ9UGL1 1544 aa22.4■■□□□ 1.18
IFFO1-209ENST00000487279 CNTLNQ9NXG0 1405 aa22.39■■□□□ 1.17
IFFO1-209ENST00000487279 MTUS2Q5JR59 1369 aa22.38■■□□□ 1.17
IFFO1-209ENST00000487279 FMN1Q68DA7 1419 aa22.38■■□□□ 1.17
IFFO1-209ENST00000487279 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.38■■□□□ 1.17
IFFO1-209ENST00000487279 NPM2Q86SE8 214 aaKnown RBP22.37■■□□□ 1.17
IFFO1-209ENST00000487279 TARBP1Q13395 1621 aaKnown RBP22.37■■□□□ 1.17
IFFO1-209ENST00000487279 SAMD9Q5K651 1589 aa22.35■■□□□ 1.17
IFFO1-209ENST00000487279 FGD6Q6ZV73 1430 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms