RNA–Protein interactions for RNA: ENST00000486862.1

OPTN-211, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-211ENST00000486862 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
OPTN-211ENST00000486862 CHMP7Q8WUX9 453 aaPredicted RBP17.16■□□□□ 0.34
OPTN-211ENST00000486862 EFCAB5A4FU69 1503 aa17.16■□□□□ 0.34
OPTN-211ENST00000486862 NUP160Q12769 1436 aa17.15■□□□□ 0.34
OPTN-211ENST00000486862 KIAA0586Q9BVV6 1533 aa17.15■□□□□ 0.34
OPTN-211ENST00000486862 ARAP1Q96P48 1450 aa17.14■□□□□ 0.33
OPTN-211ENST00000486862 IQGAP2Q13576 1575 aa17.13■□□□□ 0.33
OPTN-211ENST00000486862 VPS8Q8N3P4 1428 aa17.13■□□□□ 0.33
OPTN-211ENST00000486862 CEP170Q5SW79 1584 aa17.12■□□□□ 0.33
OPTN-211ENST00000486862 SAMD9Q5K651 1589 aa17.11■□□□□ 0.33
OPTN-211ENST00000486862 RANGAP1P46060 587 aaPredicted RBP17.09■□□□□ 0.33
OPTN-211ENST00000486862 UGGT2Q9NYU1 1516 aa17.09■□□□□ 0.33
OPTN-211ENST00000486862 CHD1O14646 1710 aa17.08■□□□□ 0.32
OPTN-211ENST00000486862 FBLN2P98095 1184 aa17.07■□□□□ 0.32
OPTN-211ENST00000486862 FHOD3Q2V2M9 1422 aa17■□□□□ 0.31
OPTN-211ENST00000486862 DISP1Q96F81 1524 aa16.98■□□□□ 0.31
OPTN-211ENST00000486862 FMN1Q68DA7 1419 aa16.97■□□□□ 0.31
OPTN-211ENST00000486862 KIAA0556O60303 1618 aa16.97■□□□□ 0.31
OPTN-211ENST00000486862 P3H3Q8IVL6 736 aa16.96■□□□□ 0.31
OPTN-211ENST00000486862 JPH4Q96JJ6 628 aa16.96■□□□□ 0.31
OPTN-211ENST00000486862 SHROOM2Q13796 1616 aa16.94■□□□□ 0.3
OPTN-211ENST00000486862 CLASP1Q7Z460 1538 aa16.94■□□□□ 0.3
OPTN-211ENST00000486862 CASKIN1Q8WXD9 1431 aa16.94■□□□□ 0.3
OPTN-211ENST00000486862 MAP3K1Q13233 1512 aa16.93■□□□□ 0.3
OPTN-211ENST00000486862 CARMIL2Q6F5E8 1435 aa16.91■□□□□ 0.3
OPTN-211ENST00000486862 FYCO1Q9BQS8 1478 aa16.91■□□□□ 0.3
OPTN-211ENST00000486862 PCF11O94913 1555 aaKnown RBP16.9■□□□□ 0.3
OPTN-211ENST00000486862 APLP2Q06481 763 aa16.89■□□□□ 0.29
OPTN-211ENST00000486862 PRG4Q92954 1404 aaPredicted RBP16.86■□□□□ 0.29
OPTN-211ENST00000486862 TIAM1Q13009 1591 aa16.85■□□□□ 0.29
OPTN-211ENST00000486862 CFAP43Q8NDM7 1665 aa16.84■□□□□ 0.29
OPTN-211ENST00000486862 TRIM26Q12899 539 aaPredicted RBP16.82■□□□□ 0.28
OPTN-211ENST00000486862 HECW1Q76N89 1606 aa16.81■□□□□ 0.28
OPTN-211ENST00000486862 PPARGC1BQ86YN6 1023 aaKnown RBP16.8■□□□□ 0.28
OPTN-211ENST00000486862 OSCARQ8IYS5 282 aa16.8■□□□□ 0.28
OPTN-211ENST00000486862 LRRIQ1Q96JM4 1722 aa16.79■□□□□ 0.28
OPTN-211ENST00000486862 RAPGEF6Q8TEU7 1601 aa16.78■□□□□ 0.28
OPTN-211ENST00000486862 CCDC18Q5T9S5 1454 aa16.78■□□□□ 0.28
OPTN-211ENST00000486862 KANK4Q5T7N3 995 aaPredicted RBP16.77■□□□□ 0.28
OPTN-211ENST00000486862 LRRC9Q6ZRR7 1453 aa16.76■□□□□ 0.27
OPTN-211ENST00000486862 ABCA8O94911 1581 aa16.76■□□□□ 0.27
OPTN-211ENST00000486862 PTPRGP23470 1445 aa16.75■□□□□ 0.27
OPTN-211ENST00000486862 ERCC6L2Q5T890 1561 aa16.75■□□□□ 0.27
OPTN-211ENST00000486862 EPRSP07814 1512 aaKnown RBP16.75■□□□□ 0.27
OPTN-211ENST00000486862 NUP153P49790 1475 aaKnown RBP16.73■□□□□ 0.27
OPTN-211ENST00000486862 ATP1B4Q9UN42 357 aaPredicted RBP16.72■□□□□ 0.27
OPTN-211ENST00000486862 PLB1Q6P1J6 1458 aa16.72■□□□□ 0.27
OPTN-211ENST00000486862 PCGF6Q9BYE7 350 aa16.69■□□□□ 0.26
OPTN-211ENST00000486862 EHBP1L1Q8N3D4 1523 aa16.67■□□□□ 0.26
OPTN-211ENST00000486862 UACAQ9BZF9 1416 aa16.67■□□□□ 0.26
OPTN-211ENST00000486862 TTBK1Q5TCY1 1321 aaPredicted RBP16.67■□□□□ 0.26
OPTN-211ENST00000486862 CDK13Q14004 1512 aaKnown RBP16.66■□□□□ 0.26
OPTN-211ENST00000486862 MAGI3Q5TCQ9 1506 aa16.65■□□□□ 0.26
OPTN-211ENST00000486862 UHRF1BP1LA0JNW5 1464 aa16.64■□□□□ 0.25
OPTN-211ENST00000486862 ABCC2Q92887 1545 aa16.64■□□□□ 0.25
OPTN-211ENST00000486862 MTUS2Q5JR59 1369 aa16.64■□□□□ 0.25
OPTN-211ENST00000486862 RRBP1Q9P2E9 1410 aaKnown RBP16.62■□□□□ 0.25
OPTN-211ENST00000486862 ATP10BO94823 1461 aa16.62■□□□□ 0.25
OPTN-211ENST00000486862 ARHGEF11O15085 1522 aa16.61■□□□□ 0.25
OPTN-211ENST00000486862 SUPT6HQ7KZ85 1726 aaKnown RBP16.6■□□□□ 0.25
OPTN-211ENST00000486862 CDK11AQ9UQ88 783 aaPredicted RBP16.6■□□□□ 0.25
OPTN-211ENST00000486862 PHLDB1Q86UU1 1377 aa16.58■□□□□ 0.24
OPTN-211ENST00000486862 NCOA2Q15596 1464 aa16.58■□□□□ 0.24
OPTN-211ENST00000486862 TROQ12816 1431 aaPredicted RBP16.57■□□□□ 0.24
OPTN-211ENST00000486862 KDM5BQ9UGL1 1544 aa16.55■□□□□ 0.24
OPTN-211ENST00000486862 ADCY10Q96PN6 1610 aa16.55■□□□□ 0.24
OPTN-211ENST00000486862 ARID3CA6NKF2 412 aa16.54■□□□□ 0.24
OPTN-211ENST00000486862 CCNB3Q8WWL7 1395 aa16.53■□□□□ 0.24
OPTN-211ENST00000486862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.52■□□□□ 0.24
OPTN-211ENST00000486862 HNRNPUL2Q1KMD3 747 aaKnown RBP16.52■□□□□ 0.24
OPTN-211ENST00000486862 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.51■□□□□ 0.23
OPTN-211ENST00000486862 PLEKHD1A6NEE1 506 aa16.51■□□□□ 0.23
OPTN-211ENST00000486862 MYOM3Q5VTT5 1437 aa16.51■□□□□ 0.23
OPTN-211ENST00000486862 ZCCHC11Q5TAX3 1644 aaKnown RBP16.49■□□□□ 0.23
OPTN-211ENST00000486862 FGD6Q6ZV73 1430 aa16.49■□□□□ 0.23
OPTN-211ENST00000486862 MIA2Q96PC5 1412 aa16.47■□□□□ 0.23
OPTN-211ENST00000486862 KIF14Q15058 1648 aa16.46■□□□□ 0.23
OPTN-211ENST00000486862 ABCC10Q5T3U5 1492 aa16.46■□□□□ 0.23
OPTN-211ENST00000486862 RIMBP3CA6NJZ7 1639 aa16.45■□□□□ 0.22
OPTN-211ENST00000486862 RIMBP3BA6NNM3 1639 aa16.45■□□□□ 0.22
OPTN-211ENST00000486862 RIMBP3Q9UFD9 1639 aa16.45■□□□□ 0.22
OPTN-211ENST00000486862 TCOF1Q13428 1488 aaKnown RBP16.44■□□□□ 0.22
OPTN-211ENST00000486862 PTPN23Q9H3S7 1636 aa16.41■□□□□ 0.22
OPTN-211ENST00000486862 GPATCH8Q9UKJ3 1502 aaKnown RBP16.41■□□□□ 0.22
OPTN-211ENST00000486862 ITSN2Q9NZM3 1697 aa16.41■□□□□ 0.22
OPTN-211ENST00000486862 CDC42BPAQ5VT25 1732 aa16.37■□□□□ 0.21
OPTN-211ENST00000486862 WDR7Q9Y4E6 1490 aa16.36■□□□□ 0.21
OPTN-211ENST00000486862 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.36■□□□□ 0.21
OPTN-211ENST00000486862 FAM50AQ14320 339 aaKnown RBP16.36■□□□□ 0.21
OPTN-211ENST00000486862 NPM1P06748 294 aaKnown RBP eCLIP16.34■□□□□ 0.21
OPTN-211ENST00000486862 ASXL2Q76L83 1435 aa16.33■□□□□ 0.2
OPTN-211ENST00000486862 TTC37Q6PGP7 1564 aa16.33■□□□□ 0.2
OPTN-211ENST00000486862 PREX2Q70Z35 1606 aa16.33■□□□□ 0.2
OPTN-211ENST00000486862 CFDP1Q9UEE9 299 aaPredicted RBP16.32■□□□□ 0.2
OPTN-211ENST00000486862 CYB5RLQ6IPT4 315 aa16.31■□□□□ 0.2
OPTN-211ENST00000486862 CDC42BPBQ9Y5S2 1711 aa16.31■□□□□ 0.2
OPTN-211ENST00000486862 ARAP3Q8WWN8 1544 aa16.29■□□□□ 0.2
OPTN-211ENST00000486862 CAMSAP2Q08AD1 1489 aa16.29■□□□□ 0.2
OPTN-211ENST00000486862 MYO5CQ9NQX4 1742 aa16.29■□□□□ 0.2
OPTN-211ENST00000486862 ABCA9Q8IUA7 1624 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms