RNA–Protein interactions for RNA: ENST00000486577.6

KCNT1-206, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNT1, Length 3,760 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-206ENST00000486577 SIN3AQ96ST3 1273 aa23.21■■□□□ 1.31
KCNT1-206ENST00000486577 BIVM-ERCC5R4GMW8 1640 aa23.17■■□□□ 1.3
KCNT1-206ENST00000486577 MTUS2Q5JR59 1369 aa23.17■■□□□ 1.3
KCNT1-206ENST00000486577 TRIM52Q96A61 297 aa23.17■■□□□ 1.3
KCNT1-206ENST00000486577 ERICH3Q5RHP9 1530 aa23.14■■□□□ 1.3
KCNT1-206ENST00000486577 RRP7BPQ9NSQ0 103 aa23.09■■□□□ 1.29
KCNT1-206ENST00000486577 DHX57Q6P158 1386 aaKnown RBP23.08■■□□□ 1.29
KCNT1-206ENST00000486577 POLA1P09884 1462 aaPredicted RBP23.08■■□□□ 1.28
KCNT1-206ENST00000486577 RAB3GAP2Q9H2M9 1393 aa23.06■■□□□ 1.28
KCNT1-206ENST00000486577 PDS5BQ9NTI5 1447 aa23.05■■□□□ 1.28
KCNT1-206ENST00000486577 TOPBP1Q92547 1522 aa23.05■■□□□ 1.28
KCNT1-206ENST00000486577 CNGB1Q14028 1251 aaPredicted RBP23.05■■□□□ 1.28
KCNT1-206ENST00000486577 FHAD1B1AJZ9 1412 aa23.02■■□□□ 1.28
KCNT1-206ENST00000486577 PHLDB1Q86UU1 1377 aa23.02■■□□□ 1.28
KCNT1-206ENST00000486577 ZNF777Q9ULD5 760 aaPredicted RBP23.02■■□□□ 1.28
KCNT1-206ENST00000486577 DDX10Q13206 875 aaKnown RBP23.01■■□□□ 1.27
KCNT1-206ENST00000486577 CHMP7Q8WUX9 453 aaPredicted RBP22.96■■□□□ 1.27
KCNT1-206ENST00000486577 AQRO60306 1485 aaKnown RBP eCLIP22.95■■□□□ 1.26
KCNT1-206ENST00000486577 GAPVD1Q14C86 1478 aa22.92■■□□□ 1.26
KCNT1-206ENST00000486577 POLR3GLQ9BT43 218 aa22.89■■□□□ 1.26
KCNT1-206ENST00000486577 SETD5Q9C0A6 1442 aa22.89■■□□□ 1.26
KCNT1-206ENST00000486577 URB2Q14146 1524 aaKnown RBP22.88■■□□□ 1.25
KCNT1-206ENST00000486577 ERCC6Q03468 1493 aa22.87■■□□□ 1.25
KCNT1-206ENST00000486577 LRRC9Q6ZRR7 1453 aa22.86■■□□□ 1.25
KCNT1-206ENST00000486577 DNMBPQ6XZF7 1577 aa22.86■■□□□ 1.25
KCNT1-206ENST00000486577 RRBP1Q9P2E9 1410 aaKnown RBP22.84■■□□□ 1.25
KCNT1-206ENST00000486577 ZNF326Q5BKZ1 582 aaKnown RBP22.83■■□□□ 1.24
KCNT1-206ENST00000486577 TONSLQ96HA7 1378 aa22.82■■□□□ 1.24
KCNT1-206ENST00000486577 CLSPNQ9HAW4 1339 aa22.82■■□□□ 1.24
KCNT1-206ENST00000486577 FOXD1Q16676 465 aa22.81■■□□□ 1.24
KCNT1-206ENST00000486577 ABCA10Q8WWZ4 1543 aa22.81■■□□□ 1.24
KCNT1-206ENST00000486577 FMN1Q68DA7 1419 aa22.8■■□□□ 1.24
KCNT1-206ENST00000486577 KCNH8Q96L42 1107 aa22.76■■□□□ 1.23
KCNT1-206ENST00000486577 TIAM1Q13009 1591 aa22.75■■□□□ 1.23
KCNT1-206ENST00000486577 PCF11O94913 1555 aaKnown RBP22.72■■□□□ 1.23
KCNT1-206ENST00000486577 BCANQ96GW7 911 aa22.72■■□□□ 1.23
KCNT1-206ENST00000486577 CDK11AQ9UQ88 783 aaPredicted RBP22.7■■□□□ 1.22
KCNT1-206ENST00000486577 CASKIN1Q8WXD9 1431 aa22.67■■□□□ 1.22
KCNT1-206ENST00000486577 LAMC3Q9Y6N6 1575 aa22.64■■□□□ 1.22
KCNT1-206ENST00000486577 ZNF644Q9H582 1327 aaPredicted RBP22.64■■□□□ 1.22
KCNT1-206ENST00000486577 ANP32CO43423 234 aa22.64■■□□□ 1.22
KCNT1-206ENST00000486577 FGD6Q6ZV73 1430 aa22.62■■□□□ 1.21
KCNT1-206ENST00000486577 CFDP1Q9UEE9 299 aaPredicted RBP22.61■■□□□ 1.21
KCNT1-206ENST00000486577 SLC4A1APQ9BWU0 796 aaKnown RBP22.6■■□□□ 1.21
KCNT1-206ENST00000486577 ZNF608Q9ULD9 1512 aaPredicted RBP22.59■■□□□ 1.21
KCNT1-206ENST00000486577 PPP1R15AO75807 674 aaPredicted RBP22.59■■□□□ 1.21
KCNT1-206ENST00000486577 FYCO1Q9BQS8 1478 aa22.58■■□□□ 1.2
KCNT1-206ENST00000486577 PRDM2Q13029 1718 aa22.55■■□□□ 1.2
KCNT1-206ENST00000486577 NCOA2Q15596 1464 aa22.55■■□□□ 1.2
KCNT1-206ENST00000486577 MYT1LQ9UL68 1186 aa22.54■■□□□ 1.2
KCNT1-206ENST00000486577 JPH4Q96JJ6 628 aa22.53■■□□□ 1.2
KCNT1-206ENST00000486577 PLEKHD1A6NEE1 506 aa22.5■■□□□ 1.19
KCNT1-206ENST00000486577 MRC2Q9UBG0 1479 aa22.5■■□□□ 1.19
KCNT1-206ENST00000486577 KIF21AQ7Z4S6 1674 aa22.49■■□□□ 1.19
KCNT1-206ENST00000486577 CCDC18Q5T9S5 1454 aa22.49■■□□□ 1.19
KCNT1-206ENST00000486577 SENP3-EIF4A1A0A087X0R7 540 aa22.49■■□□□ 1.19
KCNT1-206ENST00000486577 EFCAB5A4FU69 1503 aa22.48■■□□□ 1.19
KCNT1-206ENST00000486577 MPHOSPH9Q99550 1183 aa22.48■■□□□ 1.19
KCNT1-206ENST00000486577 MYOM3Q5VTT5 1437 aa22.48■■□□□ 1.19
KCNT1-206ENST00000486577 CDK13Q14004 1512 aaKnown RBP22.47■■□□□ 1.19
KCNT1-206ENST00000486577 KDM2AQ9Y2K7 1162 aa22.47■■□□□ 1.19
KCNT1-206ENST00000486577 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
KCNT1-206ENST00000486577 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.47■■□□□ 1.19
KCNT1-206ENST00000486577 PTPRKQ15262 1439 aa22.45■■□□□ 1.18
KCNT1-206ENST00000486577 CUL7Q14999 1698 aa22.45■■□□□ 1.18
KCNT1-206ENST00000486577 NEFLP07196 543 aa22.45■■□□□ 1.18
KCNT1-206ENST00000486577 SNAPC4Q5SXM2 1469 aa22.42■■□□□ 1.18
KCNT1-206ENST00000486577 WDR97A6NE52 1622 aa22.4■■□□□ 1.18
KCNT1-206ENST00000486577 L3MBTL2Q969R5 705 aa22.4■■□□□ 1.18
KCNT1-206ENST00000486577 PELP1Q8IZL8 1130 aaKnown RBP22.4■■□□□ 1.18
KCNT1-206ENST00000486577 TSPY4P0CV99 314 aa22.39■■□□□ 1.17
KCNT1-206ENST00000486577 TSPY10P0CW01 314 aa22.39■■□□□ 1.17
KCNT1-206ENST00000486577 HSPA5P11021 654 aaKnown RBP22.38■■□□□ 1.17
KCNT1-206ENST00000486577 MAPKBP1O60336 1514 aa22.38■■□□□ 1.17
KCNT1-206ENST00000486577 MAP3K1Q13233 1512 aa22.38■■□□□ 1.17
KCNT1-206ENST00000486577 EIF4G2P78344 907 aaKnown RBP eCLIP22.37■■□□□ 1.17
KCNT1-206ENST00000486577 FKBP8Q14318 412 aa22.37■■□□□ 1.17
KCNT1-206ENST00000486577 HNRNPUQ00839 825 aaKnown RBP eCLIP22.36■■□□□ 1.17
KCNT1-206ENST00000486577 FAM9BQ8IZU0 186 aa22.35■■□□□ 1.17
KCNT1-206ENST00000486577 HNRNPMP52272 730 aaKnown RBP eCLIP22.34■■□□□ 1.17
KCNT1-206ENST00000486577 TIMELESSQ9UNS1 1208 aa22.32■■□□□ 1.16
KCNT1-206ENST00000486577 NAIPQ13075 1403 aa22.32■■□□□ 1.16
KCNT1-206ENST00000486577 PRG4Q92954 1404 aaPredicted RBP22.32■■□□□ 1.16
KCNT1-206ENST00000486577 EPRSP07814 1512 aaKnown RBP22.31■■□□□ 1.16
KCNT1-206ENST00000486577 RGL3Q3MIN7 710 aa22.31■■□□□ 1.16
KCNT1-206ENST00000486577 IFT140Q96RY7 1462 aa22.31■■□□□ 1.16
KCNT1-206ENST00000486577 CTTNBP2Q8WZ74 1663 aa22.31■■□□□ 1.16
KCNT1-206ENST00000486577 IQGAP2Q13576 1575 aa22.3■■□□□ 1.16
KCNT1-206ENST00000486577 IRX6P78412 446 aaPredicted RBP22.3■■□□□ 1.16
KCNT1-206ENST00000486577 PKD2Q13563 968 aa22.3■■□□□ 1.16
KCNT1-206ENST00000486577 UACAQ9BZF9 1416 aa22.29■■□□□ 1.16
KCNT1-206ENST00000486577 ABCA5Q8WWZ7 1642 aa22.27■■□□□ 1.16
KCNT1-206ENST00000486577 HFM1A2PYH4 1435 aa22.27■■□□□ 1.16
KCNT1-206ENST00000486577 CARMIL2Q6F5E8 1435 aa22.26■■□□□ 1.15
KCNT1-206ENST00000486577 SUPT16HQ9Y5B9 1047 aaKnown RBP22.25■■□□□ 1.15
KCNT1-206ENST00000486577 PLB1Q6P1J6 1458 aa22.25■■□□□ 1.15
KCNT1-206ENST00000486577 CFAP43Q8NDM7 1665 aa22.22■■□□□ 1.15
KCNT1-206ENST00000486577 EHBP1L1Q8N3D4 1523 aa22.21■■□□□ 1.15
KCNT1-206ENST00000486577 THOC2Q8NI27 1593 aaKnown RBP22.21■■□□□ 1.15
KCNT1-206ENST00000486577 TARBP1Q13395 1621 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms