RNA–Protein interactions for RNA: ENST00000486506.5

MECP2-209, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 2,907 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-209ENST00000486506 RAPGEF2Q9Y4G8 1499 aa11.67□□□□□ -0.54
MECP2-209ENST00000486506 CARMIL1Q5VZK9 1371 aa11.65□□□□□ -0.54
MECP2-209ENST00000486506 WDR97A6NE52 1622 aa11.65□□□□□ -0.54
MECP2-209ENST00000486506 PRXQ9BXM0 1461 aa11.65□□□□□ -0.54
MECP2-209ENST00000486506 GOLGA3Q08378 1498 aa11.64□□□□□ -0.55
MECP2-209ENST00000486506 ABCA5Q8WWZ7 1642 aa11.63□□□□□ -0.55
MECP2-209ENST00000486506 ANO8Q9HCE9 1232 aaPredicted RBP11.62□□□□□ -0.55
MECP2-209ENST00000486506 KIF21BO75037 1637 aa11.6□□□□□ -0.55
MECP2-209ENST00000486506 GRIN2BQ13224 1484 aa11.59□□□□□ -0.55
MECP2-209ENST00000486506 EIF4G3O43432 1585 aaKnown RBP11.58□□□□□ -0.55
MECP2-209ENST00000486506 ERICH3Q5RHP9 1530 aa11.58□□□□□ -0.56
MECP2-209ENST00000486506 TNIKQ9UKE5 1360 aa11.58□□□□□ -0.56
MECP2-209ENST00000486506 FBLN2P98095 1184 aa11.57□□□□□ -0.56
MECP2-209ENST00000486506 SNAPC4Q5SXM2 1469 aa11.55□□□□□ -0.56
MECP2-209ENST00000486506 DNAJC5Q9H3Z4 198 aa11.54□□□□□ -0.56
MECP2-209ENST00000486506 CEP162Q5TB80 1403 aa11.54□□□□□ -0.56
MECP2-209ENST00000486506 PBRM1Q86U86 1689 aa11.53□□□□□ -0.56
MECP2-209ENST00000486506 FHAD1B1AJZ9 1412 aa11.53□□□□□ -0.56
MECP2-209ENST00000486506 PLEKHG5O94827 1062 aa11.53□□□□□ -0.56
MECP2-209ENST00000486506 CHMP7Q8WUX9 453 aaPredicted RBP11.53□□□□□ -0.56
MECP2-209ENST00000486506 CUL7Q14999 1698 aa11.53□□□□□ -0.56
MECP2-209ENST00000486506 ADAMTS12P58397 1594 aa11.5□□□□□ -0.57
MECP2-209ENST00000486506 MAGI1Q96QZ7 1491 aaPredicted RBP11.49□□□□□ -0.57
MECP2-209ENST00000486506 CLIP1P30622 1438 aa11.48□□□□□ -0.57
MECP2-209ENST00000486506 CLSPNQ9HAW4 1339 aa11.48□□□□□ -0.57
MECP2-209ENST00000486506 ERICH6BQ5W0A0 696 aa11.47□□□□□ -0.57
MECP2-209ENST00000486506 PODXL2Q9NZ53 605 aa11.47□□□□□ -0.57
MECP2-209ENST00000486506 SYNJ2O15056 1496 aa11.46□□□□□ -0.57
MECP2-209ENST00000486506 P3H3Q8IVL6 736 aa11.46□□□□□ -0.58
MECP2-209ENST00000486506 PKNOX2Q96KN3 472 aa11.46□□□□□ -0.58
MECP2-209ENST00000486506 TSHZ2Q9NRE2 1034 aa11.46□□□□□ -0.58
MECP2-209ENST00000486506 GRIN2AQ12879 1464 aa11.45□□□□□ -0.58
MECP2-209ENST00000486506 MYT1LQ9UL68 1186 aa11.45□□□□□ -0.58
MECP2-209ENST00000486506 DIEXFQ68CQ4 756 aaKnown RBP11.43□□□□□ -0.58
MECP2-209ENST00000486506 ARHGAP35Q9NRY4 1499 aa11.4□□□□□ -0.58
MECP2-209ENST00000486506 ARAP1Q96P48 1450 aa11.38□□□□□ -0.59
MECP2-209ENST00000486506 CEP170Q5SW79 1584 aa11.37□□□□□ -0.59
MECP2-209ENST00000486506 KIAA0586Q9BVV6 1533 aa11.37□□□□□ -0.59
MECP2-209ENST00000486506 SALL2Q9Y467 1007 aaPredicted RBP11.37□□□□□ -0.59
MECP2-209ENST00000486506 CTTNBP2Q8WZ74 1663 aa11.37□□□□□ -0.59
MECP2-209ENST00000486506 NUP160Q12769 1436 aa11.37□□□□□ -0.59
MECP2-209ENST00000486506 FHOD3Q2V2M9 1422 aa11.36□□□□□ -0.59
MECP2-209ENST00000486506 IQGAP2Q13576 1575 aa11.36□□□□□ -0.59
MECP2-209ENST00000486506 JPH4Q96JJ6 628 aa11.35□□□□□ -0.59
MECP2-209ENST00000486506 CHD1O14646 1710 aa11.34□□□□□ -0.59
MECP2-209ENST00000486506 VPS8Q8N3P4 1428 aa11.34□□□□□ -0.59
MECP2-209ENST00000486506 ATP1B4Q9UN42 357 aaPredicted RBP11.32□□□□□ -0.6
MECP2-209ENST00000486506 EFCAB5A4FU69 1503 aa11.29□□□□□ -0.6
MECP2-209ENST00000486506 UGGT2Q9NYU1 1516 aa11.29□□□□□ -0.6
MECP2-209ENST00000486506 DISP1Q96F81 1524 aa11.28□□□□□ -0.6
MECP2-209ENST00000486506 OSCARQ8IYS5 282 aa11.28□□□□□ -0.6
MECP2-209ENST00000486506 SAMD9Q5K651 1589 aa11.27□□□□□ -0.61
MECP2-209ENST00000486506 PRG4Q92954 1404 aaPredicted RBP11.26□□□□□ -0.61
MECP2-209ENST00000486506 ARID3CA6NKF2 412 aa11.25□□□□□ -0.61
MECP2-209ENST00000486506 CCDC136Q96JN2 1154 aa11.25□□□□□ -0.61
MECP2-209ENST00000486506 SUPT16HQ9Y5B9 1047 aaKnown RBP11.25□□□□□ -0.61
MECP2-209ENST00000486506 FMN1Q68DA7 1419 aa11.24□□□□□ -0.61
MECP2-209ENST00000486506 CARMIL2Q6F5E8 1435 aa11.24□□□□□ -0.61
MECP2-209ENST00000486506 KIAA0556O60303 1618 aa11.24□□□□□ -0.61
MECP2-209ENST00000486506 KANK4Q5T7N3 995 aaPredicted RBP11.22□□□□□ -0.61
MECP2-209ENST00000486506 NEFLP07196 543 aa11.22□□□□□ -0.61
MECP2-209ENST00000486506 CLASP1Q7Z460 1538 aa11.21□□□□□ -0.61
MECP2-209ENST00000486506 PCF11O94913 1555 aaKnown RBP11.21□□□□□ -0.62
MECP2-209ENST00000486506 ERCC6L2Q5T890 1561 aa11.2□□□□□ -0.62
MECP2-209ENST00000486506 CASKIN1Q8WXD9 1431 aa11.2□□□□□ -0.62
MECP2-209ENST00000486506 DEKP35659 375 aaKnown RBP11.19□□□□□ -0.62
MECP2-209ENST00000486506 CCER1Q8TC90 406 aaPredicted RBP11.19□□□□□ -0.62
MECP2-209ENST00000486506 YTHDC1Q96MU7 727 aaKnown RBP11.19□□□□□ -0.62
MECP2-209ENST00000486506 PLB1Q6P1J6 1458 aa11.18□□□□□ -0.62
MECP2-209ENST00000486506 PTPRGP23470 1445 aa11.18□□□□□ -0.62
MECP2-209ENST00000486506 FYCO1Q9BQS8 1478 aa11.17□□□□□ -0.62
MECP2-209ENST00000486506 SHROOM2Q13796 1616 aa11.17□□□□□ -0.62
MECP2-209ENST00000486506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.17□□□□□ -0.62
MECP2-209ENST00000486506 HNRNPUL2Q1KMD3 747 aaKnown RBP11.17□□□□□ -0.62
MECP2-209ENST00000486506 NCBP3Q53F19 620 aaKnown RBP11.16□□□□□ -0.62
MECP2-209ENST00000486506 ZNF316A6NFI3 1004 aaPredicted RBP11.15□□□□□ -0.63
MECP2-209ENST00000486506 TIAM1Q13009 1591 aa11.13□□□□□ -0.63
MECP2-209ENST00000486506 NUP153P49790 1475 aaKnown RBP11.12□□□□□ -0.63
MECP2-209ENST00000486506 CDK13Q14004 1512 aaKnown RBP11.12□□□□□ -0.63
MECP2-209ENST00000486506 EPRSP07814 1512 aaKnown RBP11.12□□□□□ -0.63
MECP2-209ENST00000486506 MTUS2Q5JR59 1369 aa11.11□□□□□ -0.63
MECP2-209ENST00000486506 LRRC9Q6ZRR7 1453 aa11.1□□□□□ -0.63
MECP2-209ENST00000486506 RAPGEF6Q8TEU7 1601 aa11.1□□□□□ -0.63
MECP2-209ENST00000486506 ITGAEP38570 1179 aa11.1□□□□□ -0.63
MECP2-209ENST00000486506 RBM19Q9Y4C8 960 aaKnown RBP11.1□□□□□ -0.63
MECP2-209ENST00000486506 HECW1Q76N89 1606 aa11.09□□□□□ -0.63
MECP2-209ENST00000486506 UACAQ9BZF9 1416 aa11.09□□□□□ -0.63
MECP2-209ENST00000486506 LRRIQ1Q96JM4 1722 aa11.09□□□□□ -0.63
MECP2-209ENST00000486506 MAP3K1Q13233 1512 aa11.09□□□□□ -0.63
MECP2-209ENST00000486506 ABCA8O94911 1581 aa11.08□□□□□ -0.64
MECP2-209ENST00000486506 MIER1Q8N108 512 aa11.08□□□□□ -0.64
MECP2-209ENST00000486506 CCDC18Q5T9S5 1454 aa11.07□□□□□ -0.64
MECP2-209ENST00000486506 ARXQ96QS3 562 aa11.06□□□□□ -0.64
MECP2-209ENST00000486506 ATP10BO94823 1461 aa11.06□□□□□ -0.64
MECP2-209ENST00000486506 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.06□□□□□ -0.64
MECP2-209ENST00000486506 MAGI3Q5TCQ9 1506 aa11.06□□□□□ -0.64
MECP2-209ENST00000486506 CFAP43Q8NDM7 1665 aa11.06□□□□□ -0.64
MECP2-209ENST00000486506 MSH5O43196 834 aa11.05□□□□□ -0.64
MECP2-209ENST00000486506 PDE4CQ08493 712 aa11.05□□□□□ -0.64
MECP2-209ENST00000486506 GLIPR1L2Q4G1C9 344 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms