RNA–Protein interactions for RNA: ENST00000486360.1

PPFIA4-205, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 4,547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-205ENST00000486360 EIF4G1Q04637 1599 aaKnown RBP21.4■■□□□ 1.02
PPFIA4-205ENST00000486360 CHGAP10645 457 aaKnown RBP21.38■■□□□ 1.01
PPFIA4-205ENST00000486360 RUSC2Q8N2Y8 1516 aa21.36■■□□□ 1.01
PPFIA4-205ENST00000486360 DAXXQ9UER7 740 aaPredicted RBP21.36■■□□□ 1.01
PPFIA4-205ENST00000486360 KANK4Q5T7N3 995 aaPredicted RBP21.35■■□□□ 1.01
PPFIA4-205ENST00000486360 RAPGEF2Q9Y4G8 1499 aa21.34■■□□□ 1.01
PPFIA4-205ENST00000486360 HIRIP3Q9BW71 556 aaPredicted RBP21.32■■□□□ 1
PPFIA4-205ENST00000486360 KDM2AQ9Y2K7 1162 aa21.32■■□□□ 1
PPFIA4-205ENST00000486360 ESF1Q9H501 851 aaKnown RBP21.31■■□□□ 1
PPFIA4-205ENST00000486360 CLSPNQ9HAW4 1339 aa21.31■■□□□ 1
PPFIA4-205ENST00000486360 MIER1Q8N108 512 aa21.3■■□□□ 1
PPFIA4-205ENST00000486360 NCAPD3P42695 1498 aa21.28■■□□□ 1
PPFIA4-205ENST00000486360 EIF4G2P78344 907 aaKnown RBP eCLIP21.27■■□□□ 1
PPFIA4-205ENST00000486360 FANCD2Q9BXW9 1451 aa21.27■■□□□ 1
PPFIA4-205ENST00000486360 STAG3Q9UJ98 1225 aa21.24■□□□□ 0.99
PPFIA4-205ENST00000486360 HNRNPUQ00839 825 aaKnown RBP eCLIP21.23■□□□□ 0.99
PPFIA4-205ENST00000486360 FMN1Q68DA7 1419 aa21.23■□□□□ 0.99
PPFIA4-205ENST00000486360 SIN3AQ96ST3 1273 aa21.22■□□□□ 0.99
PPFIA4-205ENST00000486360 FAM9BQ8IZU0 186 aa21.2■□□□□ 0.98
PPFIA4-205ENST00000486360 ARHGAP35Q9NRY4 1499 aa21.19■□□□□ 0.98
PPFIA4-205ENST00000486360 MYT1Q01538 1121 aa21.16■□□□□ 0.98
PPFIA4-205ENST00000486360 FHOD3Q2V2M9 1422 aa21.14■□□□□ 0.97
PPFIA4-205ENST00000486360 CARMIL2Q6F5E8 1435 aa21.14■□□□□ 0.97
PPFIA4-205ENST00000486360 SETD5Q9C0A6 1442 aa21.13■□□□□ 0.97
PPFIA4-205ENST00000486360 NEFMP07197 916 aa21.12■□□□□ 0.97
PPFIA4-205ENST00000486360 TMC1Q8TDI8 760 aa21.12■□□□□ 0.97
PPFIA4-205ENST00000486360 RGL3Q3MIN7 710 aa21.11■□□□□ 0.97
PPFIA4-205ENST00000486360 MRS2Q9HD23 443 aa21.11■□□□□ 0.97
PPFIA4-205ENST00000486360 FGD5Q6ZNL6 1462 aa21.09■□□□□ 0.97
PPFIA4-205ENST00000486360 FKBP8Q14318 412 aa21.08■□□□□ 0.96
PPFIA4-205ENST00000486360 CANXP27824 592 aaKnown RBP21.06■□□□□ 0.96
PPFIA4-205ENST00000486360 IGF1RP08069 1367 aa21.06■□□□□ 0.96
PPFIA4-205ENST00000486360 TIMELESSQ9UNS1 1208 aa21.05■□□□□ 0.96
PPFIA4-205ENST00000486360 RAB3GAP2Q9H2M9 1393 aa21.02■□□□□ 0.96
PPFIA4-205ENST00000486360 PLPPR3Q6T4P5 718 aa21.02■□□□□ 0.96
PPFIA4-205ENST00000486360 SALL2Q9Y467 1007 aaPredicted RBP20.99■□□□□ 0.95
PPFIA4-205ENST00000486360 CFTRP13569 1480 aa20.99■□□□□ 0.95
PPFIA4-205ENST00000486360 RAD54L2Q9Y4B4 1467 aa20.98■□□□□ 0.95
PPFIA4-205ENST00000486360 CARD11Q9BXL7 1154 aa20.97■□□□□ 0.95
PPFIA4-205ENST00000486360 JPH4Q96JJ6 628 aa20.95■□□□□ 0.94
PPFIA4-205ENST00000486360 GAPVD1Q14C86 1478 aa20.94■□□□□ 0.94
PPFIA4-205ENST00000486360 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
PPFIA4-205ENST00000486360 BICRAQ9NZM4 1560 aa20.93■□□□□ 0.94
PPFIA4-205ENST00000486360 HMGXB3Q12766 1538 aa20.92■□□□□ 0.94
PPFIA4-205ENST00000486360 WDR43Q15061 677 aaKnown RBP eCLIP20.91■□□□□ 0.94
PPFIA4-205ENST00000486360 SCAF1Q9H7N4 1312 aaKnown RBP20.9■□□□□ 0.94
PPFIA4-205ENST00000486360 ZBTB47Q9UFB7 747 aaPredicted RBP20.88■□□□□ 0.93
PPFIA4-205ENST00000486360 SLC24A1O60721 1099 aa20.88■□□□□ 0.93
PPFIA4-205ENST00000486360 RTL5Q5HYW3 569 aaPredicted RBP20.88■□□□□ 0.93
PPFIA4-205ENST00000486360 CCDC18Q5T9S5 1454 aa20.86■□□□□ 0.93
PPFIA4-205ENST00000486360 PKD2Q13563 968 aa20.85■□□□□ 0.93
PPFIA4-205ENST00000486360 FOXD1Q16676 465 aa20.84■□□□□ 0.93
PPFIA4-205ENST00000486360 MPHOSPH9Q99550 1183 aa20.84■□□□□ 0.93
PPFIA4-205ENST00000486360 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
PPFIA4-205ENST00000486360 CDCA8Q53HL2 280 aa20.83■□□□□ 0.93
PPFIA4-205ENST00000486360 DCAF11Q8TEB1 546 aa20.83■□□□□ 0.93
PPFIA4-205ENST00000486360 KIF21BO75037 1637 aa20.82■□□□□ 0.92
PPFIA4-205ENST00000486360 EFCAB2Q5VUJ9 269 aa20.82■□□□□ 0.92
PPFIA4-205ENST00000486360 CC2D2AQ9P2K1 1620 aa20.81■□□□□ 0.92
PPFIA4-205ENST00000486360 PPP1R15AO75807 674 aaPredicted RBP20.81■□□□□ 0.92
PPFIA4-205ENST00000486360 ANKRD30AQ9BXX3 1397 aa20.81■□□□□ 0.92
PPFIA4-205ENST00000486360 NESP48681 1621 aa20.79■□□□□ 0.92
PPFIA4-205ENST00000486360 ERICH3Q5RHP9 1530 aa20.77■□□□□ 0.92
PPFIA4-205ENST00000486360 TOP2BQ02880 1626 aa20.77■□□□□ 0.92
PPFIA4-205ENST00000486360 KANK1Q14678 1352 aa20.77■□□□□ 0.92
PPFIA4-205ENST00000486360 NUP155O75694 1391 aa20.77■□□□□ 0.91
PPFIA4-205ENST00000486360 KNSTRNQ9Y448 316 aa20.76■□□□□ 0.91
PPFIA4-205ENST00000486360 DHX57Q6P158 1386 aaKnown RBP20.75■□□□□ 0.91
PPFIA4-205ENST00000486360 AQRO60306 1485 aaKnown RBP eCLIP20.75■□□□□ 0.912e-6■■■■□ 25.4
PPFIA4-205ENST00000486360 BCL11AQ9H165 835 aa20.75■□□□□ 0.91
PPFIA4-205ENST00000486360 CCDC136Q96JN2 1154 aa20.74■□□□□ 0.91
PPFIA4-205ENST00000486360 CUX1P39880 1505 aa20.74■□□□□ 0.91
PPFIA4-205ENST00000486360 ARID4BQ4LE39 1312 aaPredicted RBP20.73■□□□□ 0.91
PPFIA4-205ENST00000486360 HSPA5P11021 654 aaKnown RBP20.73■□□□□ 0.91
PPFIA4-205ENST00000486360 HNRNPMP52272 730 aaKnown RBP eCLIP20.73■□□□□ 0.91
PPFIA4-205ENST00000486360 IRX6P78412 446 aaPredicted RBP20.72■□□□□ 0.91
PPFIA4-205ENST00000486360 PRXQ9BXM0 1461 aa20.72■□□□□ 0.91
PPFIA4-205ENST00000486360 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.71■□□□□ 0.91
PPFIA4-205ENST00000486360 RSPH4AQ5TD94 716 aa20.7■□□□□ 0.9
PPFIA4-205ENST00000486360 ANP32AP39687 249 aaKnown RBP20.7■□□□□ 0.9
PPFIA4-205ENST00000486360 PTPRGP23470 1445 aa20.7■□□□□ 0.9
PPFIA4-205ENST00000486360 ARAP1Q96P48 1450 aa20.67■□□□□ 0.9
PPFIA4-205ENST00000486360 TOPBP1Q92547 1522 aa20.67■□□□□ 0.9
PPFIA4-205ENST00000486360 GGT6Q6P531 493 aa20.65■□□□□ 0.9
PPFIA4-205ENST00000486360 L3MBTL2Q969R5 705 aa20.65■□□□□ 0.9
PPFIA4-205ENST00000486360 SENP3-EIF4A1A0A087X0R7 540 aa20.65■□□□□ 0.9
PPFIA4-205ENST00000486360 TMF1P82094 1093 aa20.64■□□□□ 0.9
PPFIA4-205ENST00000486360 POLA1P09884 1462 aaPredicted RBP20.64■□□□□ 0.89
PPFIA4-205ENST00000486360 GRIN2BQ13224 1484 aa20.63■□□□□ 0.89
PPFIA4-205ENST00000486360 NPM2Q86SE8 214 aaKnown RBP20.63■□□□□ 0.89
PPFIA4-205ENST00000486360 LRRC9Q6ZRR7 1453 aa20.62■□□□□ 0.89
PPFIA4-205ENST00000486360 CCER2I3L3R5 266 aa20.62■□□□□ 0.89
PPFIA4-205ENST00000486360 PEG3Q9GZU2 1588 aa20.61■□□□□ 0.89
PPFIA4-205ENST00000486360 PHLDB1Q86UU1 1377 aa20.61■□□□□ 0.89
PPFIA4-205ENST00000486360 CASKIN1Q8WXD9 1431 aa20.6■□□□□ 0.89
PPFIA4-205ENST00000486360 CFAP53Q96M91 514 aa20.6■□□□□ 0.89
PPFIA4-205ENST00000486360 SPAG9O60271 1321 aaKnown RBP20.59■□□□□ 0.89
PPFIA4-205ENST00000486360 FGD6Q6ZV73 1430 aa20.59■□□□□ 0.89
PPFIA4-205ENST00000486360 POGKQ9P215 609 aa20.58■□□□□ 0.89
PPFIA4-205ENST00000486360 SUPT16HQ9Y5B9 1047 aaKnown RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms