RNA–Protein interactions for RNA: ENST00000486360.1

PPFIA4-205, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 4,547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-205ENST00000486360 NISCHQ9Y2I1 1504 aa28.76■■■□□ 2.19
PPFIA4-205ENST00000486360 DCAF8L2P0C7V8 631 aa27.7■■■□□ 2.02
PPFIA4-205ENST00000486360 SUPT5HO00267 1087 aaKnown RBP26.44■■□□□ 1.82
PPFIA4-205ENST00000486360 SHROOM4Q9ULL8 1493 aa26.4■■□□□ 1.82
PPFIA4-205ENST00000486360 EHMT2Q96KQ7 1210 aa25.04■■□□□ 1.6
PPFIA4-205ENST00000486360 FAM9AQ8IZU1 332 aaPredicted RBP24.77■■□□□ 1.56
PPFIA4-205ENST00000486360 TRIM41Q8WV44 630 aa24.6■■□□□ 1.53
PPFIA4-205ENST00000486360 APLP2Q06481 763 aa24.41■■□□□ 1.5
PPFIA4-205ENST00000486360 ABCC9O60706 1549 aa24.33■■□□□ 1.48
PPFIA4-205ENST00000486360 PCGF6Q9BYE7 350 aa24.29■■□□□ 1.48
PPFIA4-205ENST00000486360 TTBK1Q5TCY1 1321 aaPredicted RBP24.14■■□□□ 1.45
PPFIA4-205ENST00000486360 CHIC1Q5VXU3 224 aa24.11■■□□□ 1.45
PPFIA4-205ENST00000486360 RANGAP1P46060 587 aaPredicted RBP24.05■■□□□ 1.44
PPFIA4-205ENST00000486360 UBTFP17480 764 aaKnown RBP24.05■■□□□ 1.44
PPFIA4-205ENST00000486360 ZCCHC6Q5VYS8 1495 aaKnown RBP23.92■■□□□ 1.42
PPFIA4-205ENST00000486360 CCDC180Q9P1Z9 1646 aa23.9■■□□□ 1.42
PPFIA4-205ENST00000486360 PABPN1Q86U42 306 aaKnown RBP eCLIP23.84■■□□□ 1.41
PPFIA4-205ENST00000486360 LOC105371045A0A1W2PR82 267 aa23.78■■□□□ 1.4
PPFIA4-205ENST00000486360 ATP1B4Q9UN42 357 aaPredicted RBP23.69■■□□□ 1.38
PPFIA4-205ENST00000486360 ZEB1P37275 1124 aaPredicted RBP23.69■■□□□ 1.38
PPFIA4-205ENST00000486360 CCER1Q8TC90 406 aaPredicted RBP23.66■■□□□ 1.38
PPFIA4-205ENST00000486360 PPARGC1BQ86YN6 1023 aaKnown RBP23.62■■□□□ 1.37
PPFIA4-205ENST00000486360 TRIM26Q12899 539 aaPredicted RBP23.56■■□□□ 1.36
PPFIA4-205ENST00000486360 SCRIBQ14160 1630 aa23.48■■□□□ 1.35
PPFIA4-205ENST00000486360 HRCP23327 699 aa23.22■■□□□ 1.31
PPFIA4-205ENST00000486360 PELP1Q8IZL8 1130 aaKnown RBP23.09■■□□□ 1.29
PPFIA4-205ENST00000486360 ITGAEP38570 1179 aa23.06■■□□□ 1.28
PPFIA4-205ENST00000486360 HNRNPUL2Q1KMD3 747 aaKnown RBP23.05■■□□□ 1.28
PPFIA4-205ENST00000486360 RB1CC1Q8TDY2 1594 aa23.05■■□□□ 1.28
PPFIA4-205ENST00000486360 CENPBP07199 599 aaPredicted RBP23.03■■□□□ 1.28
PPFIA4-205ENST00000486360 NACADO15069 1562 aa23■■□□□ 1.27
PPFIA4-205ENST00000486360 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.98■■□□□ 1.27
PPFIA4-205ENST00000486360 DCAF1Q9Y4B6 1507 aa22.97■■□□□ 1.27
PPFIA4-205ENST00000486360 CSRNP3Q8WYN3 585 aa22.93■■□□□ 1.26
PPFIA4-205ENST00000486360 RSF1Q96T23 1441 aaPredicted RBP22.88■■□□□ 1.25
PPFIA4-205ENST00000486360 YTHDC1Q96MU7 727 aaKnown RBP22.69■■□□□ 1.22
PPFIA4-205ENST00000486360 FAM50AQ14320 339 aaKnown RBP22.65■■□□□ 1.22
PPFIA4-205ENST00000486360 MYT1LQ9UL68 1186 aa22.55■■□□□ 1.2
PPFIA4-205ENST00000486360 CECR2Q9BXF3 1484 aa22.54■■□□□ 1.2
PPFIA4-205ENST00000486360 FBLN2P98095 1184 aa22.51■■□□□ 1.19
PPFIA4-205ENST00000486360 P3H3Q8IVL6 736 aa22.5■■□□□ 1.19
PPFIA4-205ENST00000486360 BAZ1AQ9NRL2 1556 aaPredicted RBP22.5■■□□□ 1.19
PPFIA4-205ENST00000486360 MYO15BQ96JP2 1530 aa22.47■■□□□ 1.19
PPFIA4-205ENST00000486360 BAZ1BQ9UIG0 1483 aaKnown RBP22.41■■□□□ 1.18
PPFIA4-205ENST00000486360 NEFLP07196 543 aa22.4■■□□□ 1.18
PPFIA4-205ENST00000486360 DIEXFQ68CQ4 756 aaKnown RBP22.37■■□□□ 1.17
PPFIA4-205ENST00000486360 TRIM52Q96A61 297 aa22.34■■□□□ 1.17
PPFIA4-205ENST00000486360 POLR3GLQ9BT43 218 aa22.34■■□□□ 1.17
PPFIA4-205ENST00000486360 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.16
PPFIA4-205ENST00000486360 EEA1Q15075 1411 aa22.29■■□□□ 1.16
PPFIA4-205ENST00000486360 NEUROD1Q13562 356 aa22.29■■□□□ 1.16
PPFIA4-205ENST00000486360 MROH2BQ7Z745 1585 aa22.28■■□□□ 1.16
PPFIA4-205ENST00000486360 ARID3CA6NKF2 412 aa22.25■■□□□ 1.15
PPFIA4-205ENST00000486360 CLIP1P30622 1438 aa22.18■■□□□ 1.14
PPFIA4-205ENST00000486360 GOLGA3Q08378 1498 aa22.14■■□□□ 1.14
PPFIA4-205ENST00000486360 CDK11AQ9UQ88 783 aaPredicted RBP22.12■■□□□ 1.13
PPFIA4-205ENST00000486360 CNGB1Q14028 1251 aaPredicted RBP22.12■■□□□ 1.13
PPFIA4-205ENST00000486360 CEP162Q5TB80 1403 aa22.1■■□□□ 1.13
PPFIA4-205ENST00000486360 ZNF316A6NFI3 1004 aaPredicted RBP22.09■■□□□ 1.13
PPFIA4-205ENST00000486360 CCDC88BA6NC98 1476 aa22.04■■□□□ 1.12
PPFIA4-205ENST00000486360 KIF27Q86VH2 1401 aa22.03■■□□□ 1.12
PPFIA4-205ENST00000486360 TNIKQ9UKE5 1360 aa22.03■■□□□ 1.12
PPFIA4-205ENST00000486360 ZNF777Q9ULD5 760 aaPredicted RBP22.01■■□□□ 1.11
PPFIA4-205ENST00000486360 CEP164Q9UPV0 1460 aa22■■□□□ 1.11
PPFIA4-205ENST00000486360 ERICH6Q7L0X2 663 aa21.99■■□□□ 1.11
PPFIA4-205ENST00000486360 ZNF326Q5BKZ1 582 aaKnown RBP21.96■■□□□ 1.11
PPFIA4-205ENST00000486360 WIZO95785 1651 aa21.95■■□□□ 1.11
PPFIA4-205ENST00000486360 SMARCA2P51531 1590 aa21.95■■□□□ 1.1
PPFIA4-205ENST00000486360 SOGA1O94964 1423 aa21.92■■□□□ 1.1
PPFIA4-205ENST00000486360 CHMP7Q8WUX9 453 aaPredicted RBP21.9■■□□□ 1.1
PPFIA4-205ENST00000486360 TOP2AP11388 1531 aaKnown RBP21.89■■□□□ 1.1
PPFIA4-205ENST00000486360 MTUS2Q5JR59 1369 aa21.89■■□□□ 1.09
PPFIA4-205ENST00000486360 ABCC8Q09428 1581 aa21.86■■□□□ 1.09
PPFIA4-205ENST00000486360 ANP32CO43423 234 aa21.84■■□□□ 1.09
PPFIA4-205ENST00000486360 SLC4A1APQ9BWU0 796 aaKnown RBP21.81■■□□□ 1.08
PPFIA4-205ENST00000486360 CHIC2Q9UKJ5 165 aa21.77■■□□□ 1.08
PPFIA4-205ENST00000486360 SMARCA4P51532 1647 aa21.77■■□□□ 1.08
PPFIA4-205ENST00000486360 TONSLQ96HA7 1378 aa21.76■■□□□ 1.07
PPFIA4-205ENST00000486360 CUX2O14529 1486 aa21.74■■□□□ 1.07
PPFIA4-205ENST00000486360 ATAD2BQ9ULI0 1458 aa21.74■■□□□ 1.07
PPFIA4-205ENST00000486360 CARMIL1Q5VZK9 1371 aa21.69■■□□□ 1.06
PPFIA4-205ENST00000486360 NPM1P06748 294 aaKnown RBP eCLIP21.63■■□□□ 1.05
PPFIA4-205ENST00000486360 GTF3C3Q9Y5Q9 886 aa21.63■■□□□ 1.05
PPFIA4-205ENST00000486360 ERCC6Q03468 1493 aa21.62■■□□□ 1.05
PPFIA4-205ENST00000486360 TSPY4P0CV99 314 aa21.62■■□□□ 1.05
PPFIA4-205ENST00000486360 TSPY10P0CW01 314 aa21.62■■□□□ 1.05
PPFIA4-205ENST00000486360 CADPSQ9ULU8 1353 aa21.57■■□□□ 1.04
PPFIA4-205ENST00000486360 RRP7BPQ9NSQ0 103 aa21.55■■□□□ 1.04
PPFIA4-205ENST00000486360 PDS5BQ9NTI5 1447 aa21.54■■□□□ 1.04
PPFIA4-205ENST00000486360 PLEKHD1A6NEE1 506 aa21.54■■□□□ 1.04
PPFIA4-205ENST00000486360 FHAD1B1AJZ9 1412 aa21.54■■□□□ 1.04
PPFIA4-205ENST00000486360 VPS8Q8N3P4 1428 aa21.53■■□□□ 1.04
PPFIA4-205ENST00000486360 ACIN1Q9UKV3 1341 aaKnown RBP21.53■■□□□ 1.04
PPFIA4-205ENST00000486360 DDX10Q13206 875 aaKnown RBP21.51■■□□□ 1.03
PPFIA4-205ENST00000486360 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.48■■□□□ 1.03
PPFIA4-205ENST00000486360 TDRD9Q8NDG6 1382 aaKnown RBP21.44■■□□□ 1.02
PPFIA4-205ENST00000486360 BCANQ96GW7 911 aa21.43■■□□□ 1.02
PPFIA4-205ENST00000486360 CFDP1Q9UEE9 299 aaPredicted RBP21.43■■□□□ 1.02
PPFIA4-205ENST00000486360 CCNB3Q8WWL7 1395 aa21.42■■□□□ 1.02
PPFIA4-205ENST00000486360 KCNH8Q96L42 1107 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms