RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 LRRC9Q6ZRR7 1453 aa25.65■■□□□ 1.7
TNXB-205ENST00000486148 TOPBP1Q92547 1522 aa25.61■■□□□ 1.69
TNXB-205ENST00000486148 P3H3Q8IVL6 736 aa25.6■■□□□ 1.69
TNXB-205ENST00000486148 ABCA10Q8WWZ4 1543 aa25.6■■□□□ 1.69
TNXB-205ENST00000486148 NESP48681 1621 aa25.6■■□□□ 1.69
TNXB-205ENST00000486148 POLA1P09884 1462 aaPredicted RBP25.6■■□□□ 1.69
TNXB-205ENST00000486148 FHAD1B1AJZ9 1412 aa25.59■■□□□ 1.69
TNXB-205ENST00000486148 RAB3GAP2Q9H2M9 1393 aa25.59■■□□□ 1.69
TNXB-205ENST00000486148 PCF11O94913 1555 aaKnown RBP25.59■■□□□ 1.69
TNXB-205ENST00000486148 PHLDB1Q86UU1 1377 aa25.59■■□□□ 1.69
TNXB-205ENST00000486148 CFAP43Q8NDM7 1665 aa25.56■■□□□ 1.68
TNXB-205ENST00000486148 FHOD3Q2V2M9 1422 aa25.53■■□□□ 1.68
TNXB-205ENST00000486148 MAPKBP1O60336 1514 aa25.52■■□□□ 1.68
TNXB-205ENST00000486148 ATP1B4Q9UN42 357 aaPredicted RBP25.49■■□□□ 1.67
TNXB-205ENST00000486148 SETD5Q9C0A6 1442 aa25.49■■□□□ 1.67
TNXB-205ENST00000486148 CUL7Q14999 1698 aa25.47■■□□□ 1.67
TNXB-205ENST00000486148 FAM50AQ14320 339 aaKnown RBP25.46■■□□□ 1.67
TNXB-205ENST00000486148 EFCAB5A4FU69 1503 aa25.46■■□□□ 1.67
TNXB-205ENST00000486148 FYCO1Q9BQS8 1478 aa25.44■■□□□ 1.66
TNXB-205ENST00000486148 CTTNBP2Q8WZ74 1663 aa25.43■■□□□ 1.66
TNXB-205ENST00000486148 CASKIN1Q8WXD9 1431 aa25.41■■□□□ 1.66
TNXB-205ENST00000486148 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
TNXB-205ENST00000486148 WDR97A6NE52 1622 aa25.39■■□□□ 1.66
TNXB-205ENST00000486148 AQRO60306 1485 aaKnown RBP eCLIP25.38■■□□□ 1.65
TNXB-205ENST00000486148 LAMC3Q9Y6N6 1575 aa25.37■■□□□ 1.65
TNXB-205ENST00000486148 TDRD9Q8NDG6 1382 aaKnown RBP25.32■■□□□ 1.64
TNXB-205ENST00000486148 SIN3AQ96ST3 1273 aa25.3■■□□□ 1.64
TNXB-205ENST00000486148 ABCA5Q8WWZ7 1642 aa25.3■■□□□ 1.64
TNXB-205ENST00000486148 FMN1Q68DA7 1419 aa25.3■■□□□ 1.64
TNXB-205ENST00000486148 SNAPC4Q5SXM2 1469 aa25.3■■□□□ 1.64
TNXB-205ENST00000486148 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.27■■□□□ 1.64
TNXB-205ENST00000486148 GAPVD1Q14C86 1478 aa25.25■■□□□ 1.63
TNXB-205ENST00000486148 SAMD9Q5K651 1589 aa25.24■■□□□ 1.63
TNXB-205ENST00000486148 FGD6Q6ZV73 1430 aa25.23■■□□□ 1.63
TNXB-205ENST00000486148 DNAJC5BQ9UF47 199 aa25.22■■□□□ 1.63
TNXB-205ENST00000486148 LRRIQ1Q96JM4 1722 aa25.21■■□□□ 1.63
TNXB-205ENST00000486148 PDS5BQ9NTI5 1447 aa25.19■■□□□ 1.62
TNXB-205ENST00000486148 MTUS2Q5JR59 1369 aa25.18■■□□□ 1.62
TNXB-205ENST00000486148 KIF21AQ7Z4S6 1674 aa25.15■■□□□ 1.62
TNXB-205ENST00000486148 GRIN2BQ13224 1484 aa25.14■■□□□ 1.62
TNXB-205ENST00000486148 PTPRKQ15262 1439 aa25.13■■□□□ 1.61
TNXB-205ENST00000486148 TIMELESSQ9UNS1 1208 aa25.11■■□□□ 1.61
TNXB-205ENST00000486148 NCOA2Q15596 1464 aa25.1■■□□□ 1.61
TNXB-205ENST00000486148 KCNH8Q96L42 1107 aa25.09■■□□□ 1.61
TNXB-205ENST00000486148 TARBP1Q13395 1621 aaKnown RBP25.09■■□□□ 1.61
TNXB-205ENST00000486148 CCDC18Q5T9S5 1454 aa25.08■■□□□ 1.61
TNXB-205ENST00000486148 THOC2Q8NI27 1593 aaKnown RBP25.06■■□□□ 1.6
TNXB-205ENST00000486148 PPP1R15AO75807 674 aaPredicted RBP25.06■■□□□ 1.6
TNXB-205ENST00000486148 BCL11AQ9H165 835 aa25.06■■□□□ 1.6
TNXB-205ENST00000486148 HFM1A2PYH4 1435 aa25.06■■□□□ 1.6
TNXB-205ENST00000486148 MYOM3Q5VTT5 1437 aa25.06■■□□□ 1.6
TNXB-205ENST00000486148 DDX10Q13206 875 aaKnown RBP25.05■■□□□ 1.6
TNXB-205ENST00000486148 PTPN23Q9H3S7 1636 aa25.04■■□□□ 1.6
TNXB-205ENST00000486148 SUPT6HQ7KZ85 1726 aaKnown RBP25.04■■□□□ 1.6
TNXB-205ENST00000486148 EHBP1L1Q8N3D4 1523 aa25.02■■□□□ 1.6
TNXB-205ENST00000486148 MAGI3Q5TCQ9 1506 aa25.01■■□□□ 1.59
TNXB-205ENST00000486148 HIRIP3Q9BW71 556 aaPredicted RBP25■■□□□ 1.59
TNXB-205ENST00000486148 UACAQ9BZF9 1416 aa25■■□□□ 1.59
TNXB-205ENST00000486148 NAIPQ13075 1403 aa25■■□□□ 1.59
TNXB-205ENST00000486148 PBRM1Q86U86 1689 aa24.98■■□□□ 1.59
TNXB-205ENST00000486148 SUPT16HQ9Y5B9 1047 aaKnown RBP24.98■■□□□ 1.59
TNXB-205ENST00000486148 UGGT2Q9NYU1 1516 aa24.97■■□□□ 1.59
TNXB-205ENST00000486148 ANP32EQ9BTT0 268 aa24.97■■□□□ 1.59
TNXB-205ENST00000486148 ARHGEF11O15085 1522 aa24.96■■□□□ 1.59
TNXB-205ENST00000486148 TONSLQ96HA7 1378 aa24.94■■□□□ 1.58
TNXB-205ENST00000486148 IQGAP2Q13576 1575 aa24.91■■□□□ 1.58
TNXB-205ENST00000486148 ADAMTS12P58397 1594 aa24.89■■□□□ 1.58
TNXB-205ENST00000486148 HECW1Q76N89 1606 aa24.89■■□□□ 1.58
TNXB-205ENST00000486148 TSHZ2Q9NRE2 1034 aa24.88■■□□□ 1.57
TNXB-205ENST00000486148 EPRSP07814 1512 aaKnown RBP24.86■■□□□ 1.57
TNXB-205ENST00000486148 TCOF1Q13428 1488 aaKnown RBP24.86■■□□□ 1.57
TNXB-205ENST00000486148 RRP7BPQ9NSQ0 103 aa24.85■■□□□ 1.57
TNXB-205ENST00000486148 CDK13Q14004 1512 aaKnown RBP24.83■■□□□ 1.57
TNXB-205ENST00000486148 CHIC2Q9UKJ5 165 aa24.83■■□□□ 1.57
TNXB-205ENST00000486148 MRC2Q9UBG0 1479 aa24.82■■□□□ 1.56
TNXB-205ENST00000486148 KDM5BQ9UGL1 1544 aa24.81■■□□□ 1.56
TNXB-205ENST00000486148 WDR62O43379 1518 aa24.8■■□□□ 1.56
TNXB-205ENST00000486148 GCC2Q8IWJ2 1684 aa24.79■■□□□ 1.56
TNXB-205ENST00000486148 ARID3CA6NKF2 412 aa24.79■■□□□ 1.56
TNXB-205ENST00000486148 DENND4BO75064 1496 aaPredicted RBP24.77■■□□□ 1.56
TNXB-205ENST00000486148 KDM6BO15054 1643 aa24.76■■□□□ 1.55
TNXB-205ENST00000486148 ANP32CO43423 234 aa24.75■■□□□ 1.55
TNXB-205ENST00000486148 ZNF608Q9ULD9 1512 aaPredicted RBP24.75■■□□□ 1.55
TNXB-205ENST00000486148 CCER2I3L3R5 266 aa24.74■■□□□ 1.55
TNXB-205ENST00000486148 MIA2Q96PC5 1412 aa24.73■■□□□ 1.55
TNXB-205ENST00000486148 AKNAQ7Z591 1439 aa24.73■■□□□ 1.55
TNXB-205ENST00000486148 TRIM52Q96A61 297 aa24.71■■□□□ 1.55
TNXB-205ENST00000486148 IFT140Q96RY7 1462 aa24.68■■□□□ 1.54
TNXB-205ENST00000486148 DISP1Q96F81 1524 aa24.66■■□□□ 1.54
TNXB-205ENST00000486148 KIAA0556O60303 1618 aa24.65■■□□□ 1.54
TNXB-205ENST00000486148 KIAA0586Q9BVV6 1533 aa24.64■■□□□ 1.53
TNXB-205ENST00000486148 MPHOSPH9Q99550 1183 aa24.63■■□□□ 1.53
TNXB-205ENST00000486148 NUP153P49790 1475 aaKnown RBP24.61■■□□□ 1.53
TNXB-205ENST00000486148 DAPK1P53355 1430 aa24.59■■□□□ 1.53
TNXB-205ENST00000486148 FOXD1Q16676 465 aa24.59■■□□□ 1.53
TNXB-205ENST00000486148 HSPA5P11021 654 aaKnown RBP24.58■■□□□ 1.53
TNXB-205ENST00000486148 FKBP8Q14318 412 aa24.57■■□□□ 1.52
TNXB-205ENST00000486148 ZNF644Q9H582 1327 aaPredicted RBP24.57■■□□□ 1.52
TNXB-205ENST00000486148 GRIN2AQ12879 1464 aa24.56■■□□□ 1.52
TNXB-205ENST00000486148 BCANQ96GW7 911 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms