RNA–Protein interactions for RNA: ENST00000486078.1

GTF2B-206, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-206ENST00000486078 SPDYE6P0CI01 402 aa9.85□□□□□ -0.83
GTF2B-206ENST00000486078 SPDYE2Q495Y8 402 aa9.85□□□□□ -0.83
GTF2B-206ENST00000486078 ARHGEF11O15085 1522 aa9.84□□□□□ -0.83
GTF2B-206ENST00000486078 AKT1S1Q96B36 256 aa9.83□□□□□ -0.84
GTF2B-206ENST00000486078 PRKCSHP14314 528 aaPredicted RBP9.82□□□□□ -0.84
GTF2B-206ENST00000486078 PEG3Q9GZU2 1588 aa9.81□□□□□ -0.84
GTF2B-206ENST00000486078 CEP164Q9UPV0 1460 aa9.79□□□□□ -0.84
GTF2B-206ENST00000486078 TAOK2Q9UL54 1235 aa9.78□□□□□ -0.84
GTF2B-206ENST00000486078 ZNF692Q9BU19 519 aaPredicted RBP9.77□□□□□ -0.85
GTF2B-206ENST00000486078 HAP1P54257 671 aaPredicted RBP9.76□□□□□ -0.85
GTF2B-206ENST00000486078 FANCD2Q9BXW9 1451 aa9.74□□□□□ -0.85
GTF2B-206ENST00000486078 SSUH2Q9Y2M2 353 aa9.72□□□□□ -0.85
GTF2B-206ENST00000486078 ARAP1Q96P48 1450 aa9.72□□□□□ -0.85
GTF2B-206ENST00000486078 MROH2BQ7Z745 1585 aa9.71□□□□□ -0.85
GTF2B-206ENST00000486078 REM2Q8IYK8 340 aaPredicted RBP9.7□□□□□ -0.86
GTF2B-206ENST00000486078 URB2Q14146 1524 aaKnown RBP9.7□□□□□ -0.86
GTF2B-206ENST00000486078 ZNF608Q9ULD9 1512 aaPredicted RBP9.66□□□□□ -0.86
GTF2B-206ENST00000486078 SPDYE4A6NLX3 237 aa9.66□□□□□ -0.86
GTF2B-206ENST00000486078 ILDR1Q86SU0 546 aaPredicted RBP9.66□□□□□ -0.86
GTF2B-206ENST00000486078 VSIG10Q8N0Z9 540 aa9.64□□□□□ -0.87
GTF2B-206ENST00000486078 CFTRP13569 1480 aa9.62□□□□□ -0.87
GTF2B-206ENST00000486078 IFT140Q96RY7 1462 aa9.62□□□□□ -0.87
GTF2B-206ENST00000486078 TPRNQ4KMQ1 711 aa9.61□□□□□ -0.87
GTF2B-206ENST00000486078 RSF1Q96T23 1441 aaPredicted RBP9.61□□□□□ -0.87
GTF2B-206ENST00000486078 CHD1O14646 1710 aa9.6□□□□□ -0.87
GTF2B-206ENST00000486078 DAXXQ9UER7 740 aaPredicted RBP9.6□□□□□ -0.87
GTF2B-206ENST00000486078 CHRDL2Q6WN34 429 aa9.59□□□□□ -0.87
GTF2B-206ENST00000486078 WIZO95785 1651 aa9.58□□□□□ -0.88
GTF2B-206ENST00000486078 SPDYE1Q8NFV5 336 aaPredicted RBP9.58□□□□□ -0.88
GTF2B-206ENST00000486078 EIF4G3O43432 1585 aaKnown RBP9.57□□□□□ -0.88
GTF2B-206ENST00000486078 PITPNM1O00562 1244 aa9.56□□□□□ -0.88
GTF2B-206ENST00000486078 AQRO60306 1485 aaKnown RBP eCLIP9.53□□□□□ -0.88
GTF2B-206ENST00000486078 CLEC11AQ9Y240 323 aa9.52□□□□□ -0.89
GTF2B-206ENST00000486078 PROM2Q8N271 834 aa9.5□□□□□ -0.89
GTF2B-206ENST00000486078 STAG3Q9UJ98 1225 aa9.5□□□□□ -0.89
GTF2B-206ENST00000486078 TOPBP1Q92547 1522 aa9.5□□□□□ -0.89
GTF2B-206ENST00000486078 ARXQ96QS3 562 aa9.48□□□□□ -0.89
GTF2B-206ENST00000486078 FBXO3Q9UK99 471 aa9.48□□□□□ -0.89
GTF2B-206ENST00000486078 CLASP1Q7Z460 1538 aa9.46□□□□□ -0.89
GTF2B-206ENST00000486078 PRDM2Q13029 1718 aa9.46□□□□□ -0.89
GTF2B-206ENST00000486078 FXR2P51116 673 aaKnown RBP eCLIP9.46□□□□□ -0.9
GTF2B-206ENST00000486078 POTEHQ6S545 545 aa9.46□□□□□ -0.9
GTF2B-206ENST00000486078 PRR29P0C7W0 189 aa9.45□□□□□ -0.9
GTF2B-206ENST00000486078 CHMP7Q8WUX9 453 aaPredicted RBP9.44□□□□□ -0.9
GTF2B-206ENST00000486078 ABCC8Q09428 1581 aa9.44□□□□□ -0.9
GTF2B-206ENST00000486078 TARBP1Q13395 1621 aaKnown RBP9.44□□□□□ -0.9
GTF2B-206ENST00000486078 SYNJ1O43426 1573 aa9.43□□□□□ -0.9
GTF2B-206ENST00000486078 PIP4P2Q8N4L2 257 aa9.43□□□□□ -0.9
GTF2B-206ENST00000486078 GAPVD1Q14C86 1478 aa9.42□□□□□ -0.9
GTF2B-206ENST00000486078 TIMELESSQ9UNS1 1208 aa9.42□□□□□ -0.9
GTF2B-206ENST00000486078 KDM4FA0A1W2PPD8 638 aa9.41□□□□□ -0.9
GTF2B-206ENST00000486078 DNMBPQ6XZF7 1577 aa9.41□□□□□ -0.9
GTF2B-206ENST00000486078 SNAPC4Q5SXM2 1469 aa9.4□□□□□ -0.9
GTF2B-206ENST00000486078 TOP2AP11388 1531 aaKnown RBP9.4□□□□□ -0.91
GTF2B-206ENST00000486078 TDRD9Q8NDG6 1382 aaKnown RBP9.39□□□□□ -0.91
GTF2B-206ENST00000486078 TULP1O00294 542 aaPredicted RBP9.39□□□□□ -0.91
GTF2B-206ENST00000486078 ERICH6Q7L0X2 663 aa9.38□□□□□ -0.91
GTF2B-206ENST00000486078 RAD54L2Q9Y4B4 1467 aa9.37□□□□□ -0.91
GTF2B-206ENST00000486078 POLA1P09884 1462 aaPredicted RBP9.36□□□□□ -0.91
GTF2B-206ENST00000486078 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.36□□□□□ -0.91
GTF2B-206ENST00000486078 KDM2AQ9Y2K7 1162 aa9.36□□□□□ -0.91
GTF2B-206ENST00000486078 SOGA1O94964 1423 aa9.34□□□□□ -0.91
GTF2B-206ENST00000486078 KIF13AQ9H1H9 1805 aa9.34□□□□□ -0.91
GTF2B-206ENST00000486078 PRKAR2AP13861 404 aaKnown RBP9.34□□□□□ -0.91
GTF2B-206ENST00000486078 MAGI1Q96QZ7 1491 aaPredicted RBP9.34□□□□□ -0.91
GTF2B-206ENST00000486078 CCDC88BA6NC98 1476 aa9.33□□□□□ -0.92
GTF2B-206ENST00000486078 SYNJ2O15056 1496 aa9.32□□□□□ -0.92
GTF2B-206ENST00000486078 ERCC6L2Q5T890 1561 aa9.31□□□□□ -0.92
GTF2B-206ENST00000486078 GRIN2BQ13224 1484 aa9.3□□□□□ -0.92
GTF2B-206ENST00000486078 GTF3C3Q9Y5Q9 886 aa9.3□□□□□ -0.92
GTF2B-206ENST00000486078 FAM69CQ0P6D2 419 aa9.29□□□□□ -0.92
GTF2B-206ENST00000486078 BBXQ8WY36 941 aaPredicted RBP9.29□□□□□ -0.92
GTF2B-206ENST00000486078 WDR97A6NE52 1622 aa9.28□□□□□ -0.92
GTF2B-206ENST00000486078 VASPP50552 380 aaPredicted RBP9.28□□□□□ -0.92
GTF2B-206ENST00000486078 CHADLQ6NUI6 762 aa9.28□□□□□ -0.92
GTF2B-206ENST00000486078 CREBZFQ9NS37 354 aa9.26□□□□□ -0.93
GTF2B-206ENST00000486078 KDM6BO15054 1643 aa9.24□□□□□ -0.93
GTF2B-206ENST00000486078 FGD5Q6ZNL6 1462 aa9.24□□□□□ -0.93
GTF2B-206ENST00000486078 PKD2Q13563 968 aa9.24□□□□□ -0.93
GTF2B-206ENST00000486078 PAXIP1Q6ZW49 1069 aaPredicted RBP9.24□□□□□ -0.93
GTF2B-206ENST00000486078 HOMEZQ8IX15 550 aa9.24□□□□□ -0.93
GTF2B-206ENST00000486078 FBXO41Q8TF61 875 aa9.24□□□□□ -0.93
GTF2B-206ENST00000486078 CEP170Q5SW79 1584 aa9.23□□□□□ -0.93
GTF2B-206ENST00000486078 ABCC10Q5T3U5 1492 aa9.22□□□□□ -0.93
GTF2B-206ENST00000486078 HECW2Q9P2P5 1572 aa9.22□□□□□ -0.93
GTF2B-206ENST00000486078 CFAP44Q96MT7 982 aa9.22□□□□□ -0.93
GTF2B-206ENST00000486078 FARP1Q9Y4F1 1045 aaPredicted RBP9.22□□□□□ -0.93
GTF2B-206ENST00000486078 PBRM1Q86U86 1689 aa9.22□□□□□ -0.93
GTF2B-206ENST00000486078 NPM1P06748 294 aaKnown RBP eCLIP9.21□□□□□ -0.94
GTF2B-206ENST00000486078 MIER1Q8N108 512 aa9.21□□□□□ -0.94
GTF2B-206ENST00000486078 PLEKHG5O94827 1062 aa9.2□□□□□ -0.94
GTF2B-206ENST00000486078 IFNLR1Q8IU57 520 aaPredicted RBP9.2□□□□□ -0.94
GTF2B-206ENST00000486078 HAX1O00165 279 aa9.19□□□□□ -0.94
GTF2B-206ENST00000486078 NBR1Q14596 966 aa9.19□□□□□ -0.94
GTF2B-206ENST00000486078 ADGRL1O94910 1474 aa9.19□□□□□ -0.94
GTF2B-206ENST00000486078 TSPOAP1O95153 1857 aa9.18□□□□□ -0.94
GTF2B-206ENST00000486078 DIP2BQ9P265 1576 aa9.17□□□□□ -0.94
GTF2B-206ENST00000486078 GRIN2AQ12879 1464 aa9.17□□□□□ -0.94
GTF2B-206ENST00000486078 SHROOM2Q13796 1616 aa9.16□□□□□ -0.94
GTF2B-206ENST00000486078 PLCD3Q8N3E9 789 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms