RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 PDS5BQ9NTI5 1447 aa11.24□□□□□ -0.61
SHROOM3-206ENST00000484236 CUL7Q14999 1698 aa11.24□□□□□ -0.61
SHROOM3-206ENST00000484236 POLA1P09884 1462 aaPredicted RBP11.23□□□□□ -0.61
SHROOM3-206ENST00000484236 WDR97A6NE52 1622 aa11.23□□□□□ -0.61
SHROOM3-206ENST00000484236 NESP48681 1621 aa11.23□□□□□ -0.61
SHROOM3-206ENST00000484236 ARHGAP35Q9NRY4 1499 aa11.21□□□□□ -0.61
SHROOM3-206ENST00000484236 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.21□□□□□ -0.61
SHROOM3-206ENST00000484236 CCER1Q8TC90 406 aaPredicted RBP11.2□□□□□ -0.62
SHROOM3-206ENST00000484236 MAP3K1Q13233 1512 aa11.19□□□□□ -0.62
SHROOM3-206ENST00000484236 URB2Q14146 1524 aaKnown RBP11.19□□□□□ -0.62
SHROOM3-206ENST00000484236 RAD54L2Q9Y4B4 1467 aa11.17□□□□□ -0.62
SHROOM3-206ENST00000484236 TTBK1Q5TCY1 1321 aaPredicted RBP11.16□□□□□ -0.62
SHROOM3-206ENST00000484236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.16□□□□□ -0.62
SHROOM3-206ENST00000484236 ABCA5Q8WWZ7 1642 aa11.16□□□□□ -0.62
SHROOM3-206ENST00000484236 EFCAB5A4FU69 1503 aa11.15□□□□□ -0.62
SHROOM3-206ENST00000484236 KIF21AQ7Z4S6 1674 aa11.15□□□□□ -0.62
SHROOM3-206ENST00000484236 CTTNBP2Q8WZ74 1663 aa11.15□□□□□ -0.62
SHROOM3-206ENST00000484236 FHAD1B1AJZ9 1412 aa11.14□□□□□ -0.63
SHROOM3-206ENST00000484236 RANGAP1P46060 587 aaPredicted RBP11.13□□□□□ -0.63
SHROOM3-206ENST00000484236 RRBP1Q9P2E9 1410 aaKnown RBP11.11□□□□□ -0.63
SHROOM3-206ENST00000484236 TIAM1Q13009 1591 aa11.11□□□□□ -0.63
SHROOM3-206ENST00000484236 GAPVD1Q14C86 1478 aa11.1□□□□□ -0.63
SHROOM3-206ENST00000484236 TARBP1Q13395 1621 aaKnown RBP11.09□□□□□ -0.63
SHROOM3-206ENST00000484236 CFAP43Q8NDM7 1665 aa11.09□□□□□ -0.63
SHROOM3-206ENST00000484236 AQRO60306 1485 aaKnown RBP eCLIP11.09□□□□□ -0.63
SHROOM3-206ENST00000484236 MRC2Q9UBG0 1479 aa11.06□□□□□ -0.64
SHROOM3-206ENST00000484236 KANK4Q5T7N3 995 aaPredicted RBP11.06□□□□□ -0.64
SHROOM3-206ENST00000484236 CLSPNQ9HAW4 1339 aa11.06□□□□□ -0.64
SHROOM3-206ENST00000484236 FYCO1Q9BQS8 1478 aa11.06□□□□□ -0.64
SHROOM3-206ENST00000484236 HNRNPUL2Q1KMD3 747 aaKnown RBP11.05□□□□□ -0.64
SHROOM3-206ENST00000484236 CASKIN1Q8WXD9 1431 aa11.04□□□□□ -0.64
SHROOM3-206ENST00000484236 DSG3P32926 999 aa11.04□□□□□ -0.64
SHROOM3-206ENST00000484236 LRRC9Q6ZRR7 1453 aa11.04□□□□□ -0.64
SHROOM3-206ENST00000484236 PBRM1Q86U86 1689 aa11.04□□□□□ -0.64
SHROOM3-206ENST00000484236 PCF11O94913 1555 aaKnown RBP11.03□□□□□ -0.64
SHROOM3-206ENST00000484236 SAMD9Q5K651 1589 aa11.03□□□□□ -0.64
SHROOM3-206ENST00000484236 FMN1Q68DA7 1419 aa11.03□□□□□ -0.64
SHROOM3-206ENST00000484236 CCNB3Q8WWL7 1395 aa11.03□□□□□ -0.64
SHROOM3-206ENST00000484236 TDRD9Q8NDG6 1382 aaKnown RBP11.02□□□□□ -0.65
SHROOM3-206ENST00000484236 WDR62O43379 1518 aa11.01□□□□□ -0.65
SHROOM3-206ENST00000484236 THOC2Q8NI27 1593 aaKnown RBP11□□□□□ -0.65
SHROOM3-206ENST00000484236 FHOD3Q2V2M9 1422 aa10.99□□□□□ -0.65
SHROOM3-206ENST00000484236 IFT140Q96RY7 1462 aa10.99□□□□□ -0.65
SHROOM3-206ENST00000484236 ADAMTS12P58397 1594 aa10.99□□□□□ -0.65
SHROOM3-206ENST00000484236 CAPN15O75808 1086 aa10.97□□□□□ -0.65
SHROOM3-206ENST00000484236 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.97□□□□□ -0.65
SHROOM3-206ENST00000484236 GRIN2BQ13224 1484 aa10.97□□□□□ -0.65
SHROOM3-206ENST00000484236 SNAPC4Q5SXM2 1469 aa10.96□□□□□ -0.65
SHROOM3-206ENST00000484236 SPINK5Q9NQ38 1064 aaPredicted RBP10.96□□□□□ -0.65
SHROOM3-206ENST00000484236 IQGAP2Q13576 1575 aa10.94□□□□□ -0.66
SHROOM3-206ENST00000484236 DHX57Q6P158 1386 aaKnown RBP10.93□□□□□ -0.66
SHROOM3-206ENST00000484236 P3H3Q8IVL6 736 aa10.91□□□□□ -0.66
SHROOM3-206ENST00000484236 CCDC18Q5T9S5 1454 aa10.91□□□□□ -0.66
SHROOM3-206ENST00000484236 PHLDB1Q86UU1 1377 aa10.9□□□□□ -0.66
SHROOM3-206ENST00000484236 UGGT2Q9NYU1 1516 aa10.9□□□□□ -0.66
SHROOM3-206ENST00000484236 ZNF316A6NFI3 1004 aaPredicted RBP10.9□□□□□ -0.66
SHROOM3-206ENST00000484236 LRRIQ1Q96JM4 1722 aa10.89□□□□□ -0.67
SHROOM3-206ENST00000484236 EHBP1L1Q8N3D4 1523 aa10.89□□□□□ -0.67
SHROOM3-206ENST00000484236 SUPT6HQ7KZ85 1726 aaKnown RBP10.89□□□□□ -0.67
SHROOM3-206ENST00000484236 HECW1Q76N89 1606 aa10.88□□□□□ -0.67
SHROOM3-206ENST00000484236 DIEXFQ68CQ4 756 aaKnown RBP10.88□□□□□ -0.67
SHROOM3-206ENST00000484236 SETD5Q9C0A6 1442 aa10.88□□□□□ -0.67
SHROOM3-206ENST00000484236 EIF4G3O43432 1585 aaKnown RBP10.87□□□□□ -0.67
SHROOM3-206ENST00000484236 ERCC6Q03468 1493 aa10.87□□□□□ -0.67
SHROOM3-206ENST00000484236 KIAA0586Q9BVV6 1533 aa10.86□□□□□ -0.67
SHROOM3-206ENST00000484236 U3KPZ7 1027 aaPredicted RBP10.86□□□□□ -0.67
SHROOM3-206ENST00000484236 MTUS2Q5JR59 1369 aa10.86□□□□□ -0.67
SHROOM3-206ENST00000484236 MAGI1Q96QZ7 1491 aaPredicted RBP10.86□□□□□ -0.67
SHROOM3-206ENST00000484236 FGD6Q6ZV73 1430 aa10.85□□□□□ -0.67
SHROOM3-206ENST00000484236 ZNF608Q9ULD9 1512 aaPredicted RBP10.85□□□□□ -0.67
SHROOM3-206ENST00000484236 ATP1B4Q9UN42 357 aaPredicted RBP10.85□□□□□ -0.67
SHROOM3-206ENST00000484236 RAB3GAP2Q9H2M9 1393 aa10.85□□□□□ -0.67
SHROOM3-206ENST00000484236 GRIN2AQ12879 1464 aa10.84□□□□□ -0.67
SHROOM3-206ENST00000484236 ARHGEF11O15085 1522 aa10.84□□□□□ -0.67
SHROOM3-206ENST00000484236 NCOA2Q15596 1464 aa10.82□□□□□ -0.68
SHROOM3-206ENST00000484236 MYOM3Q5VTT5 1437 aa10.82□□□□□ -0.68
SHROOM3-206ENST00000484236 KIAA0556O60303 1618 aa10.81□□□□□ -0.68
SHROOM3-206ENST00000484236 FAM50AQ14320 339 aaKnown RBP10.81□□□□□ -0.68
SHROOM3-206ENST00000484236 EPRSP07814 1512 aaKnown RBP10.8□□□□□ -0.68
SHROOM3-206ENST00000484236 ITGAEP38570 1179 aa10.8□□□□□ -0.68
SHROOM3-206ENST00000484236 SYNJ2O15056 1496 aa10.8□□□□□ -0.68
SHROOM3-206ENST00000484236 MAPKBP1O60336 1514 aa10.79□□□□□ -0.68
SHROOM3-206ENST00000484236 PTPN23Q9H3S7 1636 aa10.78□□□□□ -0.68
SHROOM3-206ENST00000484236 TIMELESSQ9UNS1 1208 aa10.78□□□□□ -0.68
SHROOM3-206ENST00000484236 TCOF1Q13428 1488 aaKnown RBP10.78□□□□□ -0.68
SHROOM3-206ENST00000484236 DISP1Q96F81 1524 aa10.78□□□□□ -0.68
SHROOM3-206ENST00000484236 MAGI3Q5TCQ9 1506 aa10.77□□□□□ -0.69
SHROOM3-206ENST00000484236 HFM1A2PYH4 1435 aa10.76□□□□□ -0.69
SHROOM3-206ENST00000484236 MIA2Q96PC5 1412 aa10.76□□□□□ -0.69
SHROOM3-206ENST00000484236 NCBP3Q53F19 620 aaKnown RBP10.76□□□□□ -0.69
SHROOM3-206ENST00000484236 RAPGEF6Q8TEU7 1601 aa10.76□□□□□ -0.69
SHROOM3-206ENST00000484236 ACIN1Q9UKV3 1341 aaKnown RBP10.75□□□□□ -0.69
SHROOM3-206ENST00000484236 NUP160Q12769 1436 aa10.75□□□□□ -0.69
SHROOM3-206ENST00000484236 AKNAQ7Z591 1439 aa10.75□□□□□ -0.69
SHROOM3-206ENST00000484236 CEP170Q5SW79 1584 aa10.73□□□□□ -0.69
SHROOM3-206ENST00000484236 GCC2Q8IWJ2 1684 aa10.73□□□□□ -0.69
SHROOM3-206ENST00000484236 CHMP7Q8WUX9 453 aaPredicted RBP10.72□□□□□ -0.69
SHROOM3-206ENST00000484236 CARMIL2Q6F5E8 1435 aa10.72□□□□□ -0.69
SHROOM3-206ENST00000484236 UACAQ9BZF9 1416 aa10.72□□□□□ -0.69
SHROOM3-206ENST00000484236 NUP153P49790 1475 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms