RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 HIRIP3Q9BW71 556 aaPredicted RBP28.05■■■□□ 2.08
RPUSD3-216ENST00000484134 PHLDB1Q86UU1 1377 aa28.04■■■□□ 2.08
RPUSD3-216ENST00000484134 RBM19Q9Y4C8 960 aaKnown RBP28.02■■■□□ 2.08
RPUSD3-216ENST00000484134 MAP3K1Q13233 1512 aa28.01■■■□□ 2.07
RPUSD3-216ENST00000484134 TRIM52Q96A61 297 aa28■■■□□ 2.07
RPUSD3-216ENST00000484134 LRRC9Q6ZRR7 1453 aa28■■■□□ 2.07
RPUSD3-216ENST00000484134 FAM50AQ14320 339 aaKnown RBP27.98■■■□□ 2.07
RPUSD3-216ENST00000484134 IGF1RP08069 1367 aa27.96■■■□□ 2.07
RPUSD3-216ENST00000484134 BCL11AQ9H165 835 aa27.96■■■□□ 2.07
RPUSD3-216ENST00000484134 CCER2I3L3R5 266 aa27.95■■■□□ 2.06
RPUSD3-216ENST00000484134 NEFLP07196 543 aa27.94■■■□□ 2.06
RPUSD3-216ENST00000484134 TIMELESSQ9UNS1 1208 aa27.91■■■□□ 2.06
RPUSD3-216ENST00000484134 CFTRP13569 1480 aa27.9■■■□□ 2.06
RPUSD3-216ENST00000484134 NCAPD3P42695 1498 aa27.9■■■□□ 2.06
RPUSD3-216ENST00000484134 ANP32CO43423 234 aa27.88■■■□□ 2.05
RPUSD3-216ENST00000484134 HMGXB3Q12766 1538 aa27.88■■■□□ 2.05
RPUSD3-216ENST00000484134 CARMIL1Q5VZK9 1371 aa27.82■■■□□ 2.04
RPUSD3-216ENST00000484134 P3H3Q8IVL6 736 aa27.79■■■□□ 2.04
RPUSD3-216ENST00000484134 CFAP43Q8NDM7 1665 aa27.77■■■□□ 2.04
RPUSD3-216ENST00000484134 MSH5O43196 834 aa27.76■■■□□ 2.03
RPUSD3-216ENST00000484134 PCF11O94913 1555 aaKnown RBP27.75■■■□□ 2.03
RPUSD3-216ENST00000484134 ATP1B4Q9UN42 357 aaPredicted RBP27.74■■■□□ 2.03
RPUSD3-216ENST00000484134 FHAD1B1AJZ9 1412 aa27.74■■■□□ 2.03
RPUSD3-216ENST00000484134 TONSLQ96HA7 1378 aa27.65■■■□□ 2.02
RPUSD3-216ENST00000484134 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.63■■■□□ 2.01
RPUSD3-216ENST00000484134 FHOD3Q2V2M9 1422 aa27.63■■■□□ 2.01
RPUSD3-216ENST00000484134 FGD5Q6ZNL6 1462 aa27.63■■■□□ 2.01
RPUSD3-216ENST00000484134 IRX6P78412 446 aaPredicted RBP27.61■■■□□ 2.01
RPUSD3-216ENST00000484134 PRDM2Q13029 1718 aa27.58■■■□□ 2.01
RPUSD3-216ENST00000484134 HNRNPUQ00839 825 aaKnown RBP eCLIP27.58■■■□□ 2.01
RPUSD3-216ENST00000484134 CCDC18Q5T9S5 1454 aa27.56■■■□□ 2
RPUSD3-216ENST00000484134 PTPRKQ15262 1439 aa27.55■■■□□ 2
RPUSD3-216ENST00000484134 FYCO1Q9BQS8 1478 aa27.55■■■□□ 2
RPUSD3-216ENST00000484134 FGD6Q6ZV73 1430 aa27.54■■■□□ 2
RPUSD3-216ENST00000484134 FANCIQ9NVI1 1328 aa27.53■■■□□ 2
RPUSD3-216ENST00000484134 CASKIN1Q8WXD9 1431 aa27.53■■■□□ 2
RPUSD3-216ENST00000484134 UACAQ9BZF9 1416 aa27.51■■□□□ 1.99
RPUSD3-216ENST00000484134 KDM5BQ9UGL1 1544 aa27.5■■□□□ 1.99
RPUSD3-216ENST00000484134 HFM1A2PYH4 1435 aa27.49■■□□□ 1.99
RPUSD3-216ENST00000484134 CDK11AQ9UQ88 783 aaPredicted RBP27.48■■□□□ 1.99
RPUSD3-216ENST00000484134 CADPSQ9ULU8 1353 aa27.46■■□□□ 1.99
RPUSD3-216ENST00000484134 AQRO60306 1485 aaKnown RBP eCLIP27.46■■□□□ 1.993e-6■■□□□ 13.8
RPUSD3-216ENST00000484134 PTPN23Q9H3S7 1636 aa27.45■■□□□ 1.99
RPUSD3-216ENST00000484134 WASHC2AQ641Q2 1341 aa27.43■■□□□ 1.98
RPUSD3-216ENST00000484134 NAIPQ13075 1403 aa27.42■■□□□ 1.98
RPUSD3-216ENST00000484134 EFCAB5A4FU69 1503 aa27.41■■□□□ 1.98
RPUSD3-216ENST00000484134 CCDC184Q52MB2 194 aa27.39■■□□□ 1.98
RPUSD3-216ENST00000484134 HSPA5P11021 654 aaKnown RBP27.38■■□□□ 1.97
RPUSD3-216ENST00000484134 MTUS2Q5JR59 1369 aa27.35■■□□□ 1.97
RPUSD3-216ENST00000484134 SNAPC4Q5SXM2 1469 aa27.35■■□□□ 1.97
RPUSD3-216ENST00000484134 RAD54L2Q9Y4B4 1467 aa27.34■■□□□ 1.97
RPUSD3-216ENST00000484134 PPP4R2Q9NY27 417 aa27.32■■□□□ 1.96
RPUSD3-216ENST00000484134 FMN1Q68DA7 1419 aa27.31■■□□□ 1.96
RPUSD3-216ENST00000484134 ERICH6BQ5W0A0 696 aa27.3■■□□□ 1.96
RPUSD3-216ENST00000484134 ERICH6Q7L0X2 663 aa27.29■■□□□ 1.96
RPUSD3-216ENST00000484134 NCOA2Q15596 1464 aa27.27■■□□□ 1.96
RPUSD3-216ENST00000484134 MYOM3Q5VTT5 1437 aa27.27■■□□□ 1.96
RPUSD3-216ENST00000484134 LRRIQ1Q96JM4 1722 aa27.26■■□□□ 1.95
RPUSD3-216ENST00000484134 DENND4BO75064 1496 aaPredicted RBP27.25■■□□□ 1.95
RPUSD3-216ENST00000484134 CTTNBP2Q8WZ74 1663 aa27.25■■□□□ 1.95
RPUSD3-216ENST00000484134 ABCA10Q8WWZ4 1543 aa27.25■■□□□ 1.95
RPUSD3-216ENST00000484134 C11orf95C9JLR9 678 aaPredicted RBP27.24■■□□□ 1.95
RPUSD3-216ENST00000484134 RRP7BPQ9NSQ0 103 aa27.23■■□□□ 1.95
RPUSD3-216ENST00000484134 CNTLNQ9NXG0 1405 aa27.22■■□□□ 1.95
RPUSD3-216ENST00000484134 EIF4G2P78344 907 aaKnown RBP eCLIP27.22■■□□□ 1.95
RPUSD3-216ENST00000484134 B4GALNT3Q6L9W6 998 aa27.22■■□□□ 1.95
RPUSD3-216ENST00000484134 FANCD2Q9BXW9 1451 aa27.21■■□□□ 1.95
RPUSD3-216ENST00000484134 FAM9BQ8IZU0 186 aa27.19■■□□□ 1.94
RPUSD3-216ENST00000484134 POLA1P09884 1462 aaPredicted RBP27.19■■□□□ 1.94
RPUSD3-216ENST00000484134 PRKRIP1Q9H875 184 aaPredicted RBP27.19■■□□□ 1.94
RPUSD3-216ENST00000484134 CC2D2AQ9P2K1 1620 aa27.18■■□□□ 1.94
RPUSD3-216ENST00000484134 CHIC2Q9UKJ5 165 aa27.18■■□□□ 1.94
RPUSD3-216ENST00000484134 CUL7Q14999 1698 aa27.17■■□□□ 1.94
RPUSD3-216ENST00000484134 GRIN2BQ13224 1484 aa27.15■■□□□ 1.94
RPUSD3-216ENST00000484134 DNMBPQ6XZF7 1577 aa27.14■■□□□ 1.94
RPUSD3-216ENST00000484134 L3MBTL2Q969R5 705 aa27.13■■□□□ 1.93
RPUSD3-216ENST00000484134 MRS2Q9HD23 443 aa27.13■■□□□ 1.93
RPUSD3-216ENST00000484134 CCDC7Q96M83 1385 aa27.12■■□□□ 1.93
RPUSD3-216ENST00000484134 SUPT6HQ7KZ85 1726 aaKnown RBP27.12■■□□□ 1.93
RPUSD3-216ENST00000484134 ZBED9Q6R2W3 1325 aa27.12■■□□□ 1.93
RPUSD3-216ENST00000484134 KDM6BO15054 1643 aa27.12■■□□□ 1.93
RPUSD3-216ENST00000484134 TOPBP1Q92547 1522 aa27.12■■□□□ 1.93
RPUSD3-216ENST00000484134 NCOA1Q15788 1441 aa27.12■■□□□ 1.93
RPUSD3-216ENST00000484134 SAMD9Q5K651 1589 aa27.1■■□□□ 1.93
RPUSD3-216ENST00000484134 UGGT2Q9NYU1 1516 aa27.09■■□□□ 1.93
RPUSD3-216ENST00000484134 HECW1Q76N89 1606 aa27.08■■□□□ 1.93
RPUSD3-216ENST00000484134 FOXD1Q16676 465 aa27.08■■□□□ 1.93
RPUSD3-216ENST00000484134 MAGI3Q5TCQ9 1506 aa27.07■■□□□ 1.92
RPUSD3-216ENST00000484134 MPHOSPH9Q99550 1183 aa27.07■■□□□ 1.92
RPUSD3-216ENST00000484134 ARHGEF11O15085 1522 aa27.07■■□□□ 1.92
RPUSD3-216ENST00000484134 EHBP1L1Q8N3D4 1523 aa27.07■■□□□ 1.92
RPUSD3-216ENST00000484134 GCC2Q8IWJ2 1684 aa27.05■■□□□ 1.92
RPUSD3-216ENST00000484134 NBPF8Q3BBV2 869 aa27.03■■□□□ 1.92
RPUSD3-216ENST00000484134 DEKP35659 375 aaKnown RBP27.02■■□□□ 1.92
RPUSD3-216ENST00000484134 TCOF1Q13428 1488 aaKnown RBP27.01■■□□□ 1.91
RPUSD3-216ENST00000484134 AEBP2Q6ZN18 517 aaPredicted RBP27.01■■□□□ 1.91
RPUSD3-216ENST00000484134 THOC2Q8NI27 1593 aaKnown RBP27■■□□□ 1.91
RPUSD3-216ENST00000484134 MYT1LQ9UL68 1186 aa26.99■■□□□ 1.91
RPUSD3-216ENST00000484134 PAK3O75914 559 aaPredicted RBP26.98■■□□□ 1.91
RPUSD3-216ENST00000484134 KIF7Q2M1P5 1343 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms