RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 GOLGA3Q08378 1498 aa14.76□□□□□ -0.05
SHROOM4-204ENST00000483955 GRIN2AQ12879 1464 aa14.72□□□□□ -0.05
SHROOM4-204ENST00000483955 CHMP7Q8WUX9 453 aaPredicted RBP14.7□□□□□ -0.06
SHROOM4-204ENST00000483955 CHD1O14646 1710 aa14.68□□□□□ -0.06
SHROOM4-204ENST00000483955 FBLN2P98095 1184 aa14.65□□□□□ -0.06
SHROOM4-204ENST00000483955 NUP160Q12769 1436 aa14.64□□□□□ -0.07
SHROOM4-204ENST00000483955 CTTNBP2Q8WZ74 1663 aa14.63□□□□□ -0.07
SHROOM4-204ENST00000483955 DMRT2Q9Y5R5 561 aa14.63□□□□□ -0.07
SHROOM4-204ENST00000483955 UBTFP17480 764 aaKnown RBP14.62□□□□□ -0.07
SHROOM4-204ENST00000483955 TNIKQ9UKE5 1360 aa14.61□□□□□ -0.07
SHROOM4-204ENST00000483955 CEP170Q5SW79 1584 aa14.61□□□□□ -0.07
SHROOM4-204ENST00000483955 MAPK8IP2Q13387 824 aaPredicted RBP14.61□□□□□ -0.07
SHROOM4-204ENST00000483955 EHMT2Q96KQ7 1210 aa14.59□□□□□ -0.07
SHROOM4-204ENST00000483955 KIAA0586Q9BVV6 1533 aa14.59□□□□□ -0.07
SHROOM4-204ENST00000483955 IQGAP2Q13576 1575 aa14.58□□□□□ -0.08
SHROOM4-204ENST00000483955 LOC105371045A0A1W2PR82 267 aa14.57□□□□□ -0.08
SHROOM4-204ENST00000483955 CLASP1Q7Z460 1538 aa14.54□□□□□ -0.08
SHROOM4-204ENST00000483955 OSCARQ8IYS5 282 aa14.52□□□□□ -0.09
SHROOM4-204ENST00000483955 UGGT2Q9NYU1 1516 aa14.51□□□□□ -0.09
SHROOM4-204ENST00000483955 EFCAB5A4FU69 1503 aa14.5□□□□□ -0.09
SHROOM4-204ENST00000483955 CEP162Q5TB80 1403 aa14.49□□□□□ -0.09
SHROOM4-204ENST00000483955 CACNB1Q02641 598 aaPredicted RBP14.49□□□□□ -0.09
SHROOM4-204ENST00000483955 CLIP1P30622 1438 aa14.48□□□□□ -0.09
SHROOM4-204ENST00000483955 SHROOM2Q13796 1616 aa14.48□□□□□ -0.09
SHROOM4-204ENST00000483955 SAMD9Q5K651 1589 aa14.46□□□□□ -0.09
SHROOM4-204ENST00000483955 JPH4Q96JJ6 628 aa14.45□□□□□ -0.1
SHROOM4-204ENST00000483955 CARMIL2Q6F5E8 1435 aa14.44□□□□□ -0.1
SHROOM4-204ENST00000483955 KIAA0556O60303 1618 aa14.44□□□□□ -0.1
SHROOM4-204ENST00000483955 ARHGAP35Q9NRY4 1499 aa14.43□□□□□ -0.1
SHROOM4-204ENST00000483955 DISP1Q96F81 1524 aa14.41□□□□□ -0.1
SHROOM4-204ENST00000483955 PRG4Q92954 1404 aaPredicted RBP14.41□□□□□ -0.1
SHROOM4-204ENST00000483955 RANGAP1P46060 587 aaPredicted RBP14.4□□□□□ -0.1
SHROOM4-204ENST00000483955 ARAP1Q96P48 1450 aa14.37□□□□□ -0.11
SHROOM4-204ENST00000483955 FHOD3Q2V2M9 1422 aa14.36□□□□□ -0.11
SHROOM4-204ENST00000483955 SCAF1Q9H7N4 1312 aaKnown RBP14.36□□□□□ -0.11
SHROOM4-204ENST00000483955 FMN1Q68DA7 1419 aa14.34□□□□□ -0.11
SHROOM4-204ENST00000483955 ERCC6L2Q5T890 1561 aa14.32□□□□□ -0.12
SHROOM4-204ENST00000483955 VPS8Q8N3P4 1428 aa14.32□□□□□ -0.12
SHROOM4-204ENST00000483955 P3H3Q8IVL6 736 aa14.31□□□□□ -0.12
SHROOM4-204ENST00000483955 ARHGEF11O15085 1522 aa14.31□□□□□ -0.12
SHROOM4-204ENST00000483955 PTPRGP23470 1445 aa14.29□□□□□ -0.12
SHROOM4-204ENST00000483955 RIMBP3CA6NJZ7 1639 aa14.26□□□□□ -0.13
SHROOM4-204ENST00000483955 RIMBP3BA6NNM3 1639 aa14.26□□□□□ -0.13
SHROOM4-204ENST00000483955 RIMBP3Q9UFD9 1639 aa14.26□□□□□ -0.13
SHROOM4-204ENST00000483955 PCF11O94913 1555 aaKnown RBP14.26□□□□□ -0.13
SHROOM4-204ENST00000483955 FYCO1Q9BQS8 1478 aa14.25□□□□□ -0.13
SHROOM4-204ENST00000483955 HECW1Q76N89 1606 aa14.25□□□□□ -0.13
SHROOM4-204ENST00000483955 RAPGEF6Q8TEU7 1601 aa14.25□□□□□ -0.13
SHROOM4-204ENST00000483955 CASKIN1Q8WXD9 1431 aa14.24□□□□□ -0.13
SHROOM4-204ENST00000483955 ABCA8O94911 1581 aa14.23□□□□□ -0.13
SHROOM4-204ENST00000483955 TTBK1Q5TCY1 1321 aaPredicted RBP14.21□□□□□ -0.13
SHROOM4-204ENST00000483955 PLB1Q6P1J6 1458 aa14.21□□□□□ -0.13
SHROOM4-204ENST00000483955 UACAQ9BZF9 1416 aa14.21□□□□□ -0.13
SHROOM4-204ENST00000483955 ABCC2Q92887 1545 aa14.2□□□□□ -0.14
SHROOM4-204ENST00000483955 UHRF1BP1LA0JNW5 1464 aa14.2□□□□□ -0.14
SHROOM4-204ENST00000483955 CCDC18Q5T9S5 1454 aa14.19□□□□□ -0.14
SHROOM4-204ENST00000483955 NUP153P49790 1475 aaKnown RBP14.18□□□□□ -0.14
SHROOM4-204ENST00000483955 MAP3K1Q13233 1512 aa14.16□□□□□ -0.14
SHROOM4-204ENST00000483955 SLC24A1O60721 1099 aa14.16□□□□□ -0.14
SHROOM4-204ENST00000483955 CFAP43Q8NDM7 1665 aa14.15□□□□□ -0.14
SHROOM4-204ENST00000483955 APLP2Q06481 763 aa14.15□□□□□ -0.14
SHROOM4-204ENST00000483955 EPRSP07814 1512 aaKnown RBP14.15□□□□□ -0.14
SHROOM4-204ENST00000483955 ATP1B4Q9UN42 357 aaPredicted RBP14.14□□□□□ -0.15
SHROOM4-204ENST00000483955 ADCY10Q96PN6 1610 aa14.14□□□□□ -0.15
SHROOM4-204ENST00000483955 DNAJC5Q9H3Z4 198 aa14.13□□□□□ -0.15
SHROOM4-204ENST00000483955 TIAM1Q13009 1591 aa14.13□□□□□ -0.15
SHROOM4-204ENST00000483955 KDM5BQ9UGL1 1544 aa14.11□□□□□ -0.15
SHROOM4-204ENST00000483955 LRRIQ1Q96JM4 1722 aa14.11□□□□□ -0.15
SHROOM4-204ENST00000483955 CYB5RLQ6IPT4 315 aa14.1□□□□□ -0.15
SHROOM4-204ENST00000483955 CDK13Q14004 1512 aaKnown RBP14.1□□□□□ -0.15
SHROOM4-204ENST00000483955 ZCCHC11Q5TAX3 1644 aaKnown RBP14.09□□□□□ -0.15
SHROOM4-204ENST00000483955 ATP10BO94823 1461 aa14.09□□□□□ -0.15
SHROOM4-204ENST00000483955 CDK11AQ9UQ88 783 aaPredicted RBP14.08□□□□□ -0.16
SHROOM4-204ENST00000483955 EHBP1L1Q8N3D4 1523 aa14.07□□□□□ -0.16
SHROOM4-204ENST00000483955 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.06□□□□□ -0.16
SHROOM4-204ENST00000483955 NPM1P06748 294 aaKnown RBP eCLIP14.06□□□□□ -0.16
SHROOM4-204ENST00000483955 HNRNPUL2Q1KMD3 747 aaKnown RBP14.06□□□□□ -0.16
SHROOM4-204ENST00000483955 LRRC9Q6ZRR7 1453 aa14.06□□□□□ -0.16
SHROOM4-204ENST00000483955 MTUS2Q5JR59 1369 aa14.05□□□□□ -0.16
SHROOM4-204ENST00000483955 RNF39Q9H2S5 420 aa14.04□□□□□ -0.16
SHROOM4-204ENST00000483955 ARID3CA6NKF2 412 aa14.03□□□□□ -0.16
SHROOM4-204ENST00000483955 TROQ12816 1431 aaPredicted RBP14.03□□□□□ -0.16
SHROOM4-204ENST00000483955 MAPKBP1O60336 1514 aa14.02□□□□□ -0.16
SHROOM4-204ENST00000483955 PLEKHD1A6NEE1 506 aa14.01□□□□□ -0.17
SHROOM4-204ENST00000483955 MAGI3Q5TCQ9 1506 aa14□□□□□ -0.17
SHROOM4-204ENST00000483955 WDR7Q9Y4E6 1490 aa14□□□□□ -0.17
SHROOM4-204ENST00000483955 KIF14Q15058 1648 aa14□□□□□ -0.17
SHROOM4-204ENST00000483955 SUPT6HQ7KZ85 1726 aaKnown RBP13.99□□□□□ -0.17
SHROOM4-204ENST00000483955 ASXL2Q76L83 1435 aa13.98□□□□□ -0.17
SHROOM4-204ENST00000483955 DCAF8L1A6NGE4 600 aa13.98□□□□□ -0.17
SHROOM4-204ENST00000483955 KANK4Q5T7N3 995 aaPredicted RBP13.98□□□□□ -0.17
SHROOM4-204ENST00000483955 NCOA2Q15596 1464 aa13.94□□□□□ -0.18
SHROOM4-204ENST00000483955 ITSN2Q9NZM3 1697 aa13.91□□□□□ -0.18
SHROOM4-204ENST00000483955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.9□□□□□ -0.18
SHROOM4-204ENST00000483955 ABCC10Q5T3U5 1492 aa13.9□□□□□ -0.18
SHROOM4-204ENST00000483955 ABCA9Q8IUA7 1624 aa13.9□□□□□ -0.19
SHROOM4-204ENST00000483955 HOXD11P31277 338 aaPredicted RBP13.89□□□□□ -0.19
SHROOM4-204ENST00000483955 PPARGC1BQ86YN6 1023 aaKnown RBP13.89□□□□□ -0.19
SHROOM4-204ENST00000483955 GLI2P10070 1586 aa13.88□□□□□ -0.19
SHROOM4-204ENST00000483955 TTC37Q6PGP7 1564 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms