RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 LAMC3Q9Y6N6 1575 aa18.33■□□□□ 0.52
LINC00477-201ENST00000483544 FHAD1B1AJZ9 1412 aa18.3■□□□□ 0.52
LINC00477-201ENST00000483544 TOPBP1Q92547 1522 aa18.29■□□□□ 0.52
LINC00477-201ENST00000483544 TIAM1Q13009 1591 aa18.28■□□□□ 0.52
LINC00477-201ENST00000483544 RANGAP1P46060 587 aaPredicted RBP18.28■□□□□ 0.52
LINC00477-201ENST00000483544 EFCAB5A4FU69 1503 aa18.27■□□□□ 0.51
LINC00477-201ENST00000483544 CFAP43Q8NDM7 1665 aa18.24■□□□□ 0.51
LINC00477-201ENST00000483544 CCNB3Q8WWL7 1395 aa18.24■□□□□ 0.51
LINC00477-201ENST00000483544 KANK4Q5T7N3 995 aaPredicted RBP18.23■□□□□ 0.51
LINC00477-201ENST00000483544 POLA1P09884 1462 aaPredicted RBP18.23■□□□□ 0.51
LINC00477-201ENST00000483544 CTTNBP2Q8WZ74 1663 aa18.22■□□□□ 0.51
LINC00477-201ENST00000483544 WDR97A6NE52 1622 aa18.22■□□□□ 0.51
LINC00477-201ENST00000483544 AQRO60306 1485 aaKnown RBP eCLIP18.2■□□□□ 0.5
LINC00477-201ENST00000483544 DHX57Q6P158 1386 aaKnown RBP18.2■□□□□ 0.5
LINC00477-201ENST00000483544 LRRC9Q6ZRR7 1453 aa18.17■□□□□ 0.5
LINC00477-201ENST00000483544 FYCO1Q9BQS8 1478 aa18.16■□□□□ 0.5
LINC00477-201ENST00000483544 DAXXQ9UER7 740 aaPredicted RBP18.15■□□□□ 0.5
LINC00477-201ENST00000483544 PDS5BQ9NTI5 1447 aa18.13■□□□□ 0.49
LINC00477-201ENST00000483544 RAD54L2Q9Y4B4 1467 aa18.13■□□□□ 0.49
LINC00477-201ENST00000483544 ABCA5Q8WWZ7 1642 aa18.12■□□□□ 0.49
LINC00477-201ENST00000483544 ERCC6Q03468 1493 aa18.11■□□□□ 0.49
LINC00477-201ENST00000483544 PCF11O94913 1555 aaKnown RBP18.11■□□□□ 0.49
LINC00477-201ENST00000483544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.11■□□□□ 0.49
LINC00477-201ENST00000483544 CASKIN1Q8WXD9 1431 aa18.1■□□□□ 0.49
LINC00477-201ENST00000483544 NESP48681 1621 aa18.1■□□□□ 0.49
LINC00477-201ENST00000483544 URB2Q14146 1524 aaKnown RBP18.09■□□□□ 0.49
LINC00477-201ENST00000483544 FMN1Q68DA7 1419 aa18.08■□□□□ 0.48
LINC00477-201ENST00000483544 KIF21AQ7Z4S6 1674 aa18.06■□□□□ 0.48
LINC00477-201ENST00000483544 THOC2Q8NI27 1593 aaKnown RBP18.05■□□□□ 0.48
LINC00477-201ENST00000483544 SAMD9Q5K651 1589 aa18.03■□□□□ 0.48
LINC00477-201ENST00000483544 SETD5Q9C0A6 1442 aa18.02■□□□□ 0.48
LINC00477-201ENST00000483544 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
LINC00477-201ENST00000483544 PHLDB1Q86UU1 1377 aa17.98■□□□□ 0.47
LINC00477-201ENST00000483544 FHOD3Q2V2M9 1422 aa17.98■□□□□ 0.47
LINC00477-201ENST00000483544 RAB3GAP2Q9H2M9 1393 aa17.98■□□□□ 0.47
LINC00477-201ENST00000483544 TARBP1Q13395 1621 aaKnown RBP17.96■□□□□ 0.47
LINC00477-201ENST00000483544 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
LINC00477-201ENST00000483544 TIMELESSQ9UNS1 1208 aa17.94■□□□□ 0.46
LINC00477-201ENST00000483544 MAPKBP1O60336 1514 aa17.91■□□□□ 0.46
LINC00477-201ENST00000483544 PBRM1Q86U86 1689 aa17.91■□□□□ 0.46
LINC00477-201ENST00000483544 MIER1Q8N108 512 aa17.89■□□□□ 0.46
LINC00477-201ENST00000483544 UBE2Q2Q8WVN8 375 aa17.89■□□□□ 0.46
LINC00477-201ENST00000483544 GRIN2BQ13224 1484 aa17.89■□□□□ 0.45
LINC00477-201ENST00000483544 EHBP1L1Q8N3D4 1523 aa17.88■□□□□ 0.45
LINC00477-201ENST00000483544 SUPT6HQ7KZ85 1726 aaKnown RBP17.88■□□□□ 0.45
LINC00477-201ENST00000483544 CCDC18Q5T9S5 1454 aa17.87■□□□□ 0.45
LINC00477-201ENST00000483544 FGD6Q6ZV73 1430 aa17.87■□□□□ 0.45
LINC00477-201ENST00000483544 TDRD9Q8NDG6 1382 aaKnown RBP17.87■□□□□ 0.45
LINC00477-201ENST00000483544 EIF5BO60841 1220 aaKnown RBP17.86■□□□□ 0.45
LINC00477-201ENST00000483544 P3H3Q8IVL6 736 aa17.85■□□□□ 0.45
LINC00477-201ENST00000483544 FAM50AQ14320 339 aaKnown RBP17.84■□□□□ 0.45
LINC00477-201ENST00000483544 MTUS2Q5JR59 1369 aa17.84■□□□□ 0.45
LINC00477-201ENST00000483544 MRC2Q9UBG0 1479 aa17.84■□□□□ 0.45
LINC00477-201ENST00000483544 LRRIQ1Q96JM4 1722 aa17.84■□□□□ 0.45
LINC00477-201ENST00000483544 ITGAEP38570 1179 aa17.84■□□□□ 0.45
LINC00477-201ENST00000483544 ADAMTS12P58397 1594 aa17.82■□□□□ 0.44
LINC00477-201ENST00000483544 HECW1Q76N89 1606 aa17.82■□□□□ 0.44
LINC00477-201ENST00000483544 IQGAP2Q13576 1575 aa17.8■□□□□ 0.44
LINC00477-201ENST00000483544 ATP1B4Q9UN42 357 aaPredicted RBP17.8■□□□□ 0.44
LINC00477-201ENST00000483544 MYOM3Q5VTT5 1437 aa17.8■□□□□ 0.44
LINC00477-201ENST00000483544 ARHGEF11O15085 1522 aa17.79■□□□□ 0.44
LINC00477-201ENST00000483544 MYT1LQ9UL68 1186 aa17.78■□□□□ 0.44
LINC00477-201ENST00000483544 HFM1A2PYH4 1435 aa17.78■□□□□ 0.44
LINC00477-201ENST00000483544 NCOA2Q15596 1464 aa17.77■□□□□ 0.43
LINC00477-201ENST00000483544 UGGT2Q9NYU1 1516 aa17.77■□□□□ 0.43
LINC00477-201ENST00000483544 IFT140Q96RY7 1462 aa17.76■□□□□ 0.43
LINC00477-201ENST00000483544 TCOF1Q13428 1488 aaKnown RBP17.74■□□□□ 0.43
LINC00477-201ENST00000483544 PTPN23Q9H3S7 1636 aa17.73■□□□□ 0.43
LINC00477-201ENST00000483544 UACAQ9BZF9 1416 aa17.72■□□□□ 0.43
LINC00477-201ENST00000483544 WDR62O43379 1518 aa17.72■□□□□ 0.43
LINC00477-201ENST00000483544 AKNAQ7Z591 1439 aa17.72■□□□□ 0.43
LINC00477-201ENST00000483544 TSHZ2Q9NRE2 1034 aa17.72■□□□□ 0.43
LINC00477-201ENST00000483544 ERICH6BQ5W0A0 696 aa17.69■□□□□ 0.42
LINC00477-201ENST00000483544 MIA2Q96PC5 1412 aa17.68■□□□□ 0.42
LINC00477-201ENST00000483544 GCC2Q8IWJ2 1684 aa17.68■□□□□ 0.42
LINC00477-201ENST00000483544 EPRSP07814 1512 aaKnown RBP17.66■□□□□ 0.42
LINC00477-201ENST00000483544 YTHDC1Q96MU7 727 aaKnown RBP17.66■□□□□ 0.42
LINC00477-201ENST00000483544 NAIPQ13075 1403 aa17.65■□□□□ 0.42
LINC00477-201ENST00000483544 KIAA0586Q9BVV6 1533 aa17.65■□□□□ 0.42
LINC00477-201ENST00000483544 PPP1R15AO75807 674 aaPredicted RBP17.63■□□□□ 0.41
LINC00477-201ENST00000483544 MAGI3Q5TCQ9 1506 aa17.62■□□□□ 0.41
LINC00477-201ENST00000483544 PTPRKQ15262 1439 aa17.62■□□□□ 0.41
LINC00477-201ENST00000483544 KIAA0556O60303 1618 aa17.6■□□□□ 0.41
LINC00477-201ENST00000483544 ANO8Q9HCE9 1232 aaPredicted RBP17.58■□□□□ 0.41
LINC00477-201ENST00000483544 SIN3AQ96ST3 1273 aa17.58■□□□□ 0.4
LINC00477-201ENST00000483544 TONSLQ96HA7 1378 aa17.57■□□□□ 0.4
LINC00477-201ENST00000483544 MAGI1Q96QZ7 1491 aaPredicted RBP17.57■□□□□ 0.4
LINC00477-201ENST00000483544 AEBP2Q6ZN18 517 aaPredicted RBP17.57■□□□□ 0.4
LINC00477-201ENST00000483544 GRIN2AQ12879 1464 aa17.55■□□□□ 0.4
LINC00477-201ENST00000483544 EIF4G3O43432 1585 aaKnown RBP17.55■□□□□ 0.4
LINC00477-201ENST00000483544 RAPGEF6Q8TEU7 1601 aa17.55■□□□□ 0.4
LINC00477-201ENST00000483544 ROCK1Q13464 1354 aa17.53■□□□□ 0.4
LINC00477-201ENST00000483544 DISP1Q96F81 1524 aa17.53■□□□□ 0.4
LINC00477-201ENST00000483544 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.4
LINC00477-201ENST00000483544 CDK13Q14004 1512 aaKnown RBP17.51■□□□□ 0.39
LINC00477-201ENST00000483544 CDK11AQ9UQ88 783 aaPredicted RBP17.5■□□□□ 0.39
LINC00477-201ENST00000483544 DNMT1P26358 1616 aaKnown RBP17.5■□□□□ 0.39
LINC00477-201ENST00000483544 ITSN2Q9NZM3 1697 aa17.48■□□□□ 0.39
LINC00477-201ENST00000483544 SYNJ2O15056 1496 aa17.47■□□□□ 0.39
LINC00477-201ENST00000483544 CCER2I3L3R5 266 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms