RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 AQRO60306 1485 aaKnown RBP eCLIP7.76□□□□□ -1.17
HDAC9-224ENST00000483142 TRIM41Q8WV44 630 aa7.76□□□□□ -1.17
HDAC9-224ENST00000483142 RUSC2Q8N2Y8 1516 aa7.76□□□□□ -1.17
HDAC9-224ENST00000483142 SYNJ2O15056 1496 aa7.75□□□□□ -1.17
HDAC9-224ENST00000483142 TDRD9Q8NDG6 1382 aaKnown RBP7.75□□□□□ -1.17
HDAC9-224ENST00000483142 DMRT2Q9Y5R5 561 aa7.75□□□□□ -1.17
HDAC9-224ENST00000483142 FHAD1B1AJZ9 1412 aa7.75□□□□□ -1.17
HDAC9-224ENST00000483142 CHD1O14646 1710 aa7.75□□□□□ -1.17
HDAC9-224ENST00000483142 IGF1RP08069 1367 aa7.73□□□□□ -1.17
HDAC9-224ENST00000483142 HOXD11P31277 338 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-224ENST00000483142 GRIN2AQ12879 1464 aa7.73□□□□□ -1.17
HDAC9-224ENST00000483142 NUP160Q12769 1436 aa7.72□□□□□ -1.17
HDAC9-224ENST00000483142 CTTNBP2Q8WZ74 1663 aa7.72□□□□□ -1.17
HDAC9-224ENST00000483142 CLASP1Q7Z460 1538 aa7.72□□□□□ -1.17
HDAC9-224ENST00000483142 RAPGEF2Q9Y4G8 1499 aa7.71□□□□□ -1.18
HDAC9-224ENST00000483142 CEP170Q5SW79 1584 aa7.7□□□□□ -1.18
HDAC9-224ENST00000483142 SHROOM2Q13796 1616 aa7.7□□□□□ -1.18
HDAC9-224ENST00000483142 GOLGA3Q08378 1498 aa7.69□□□□□ -1.18
HDAC9-224ENST00000483142 CARMIL1Q5VZK9 1371 aa7.68□□□□□ -1.18
HDAC9-224ENST00000483142 IQGAP2Q13576 1575 aa7.65□□□□□ -1.18
HDAC9-224ENST00000483142 SAMD9Q5K651 1589 aa7.64□□□□□ -1.19
HDAC9-224ENST00000483142 KIAA0586Q9BVV6 1533 aa7.64□□□□□ -1.19
HDAC9-224ENST00000483142 UGGT2Q9NYU1 1516 aa7.64□□□□□ -1.19
HDAC9-224ENST00000483142 FOXD4L1Q9NU39 408 aa7.64□□□□□ -1.19
HDAC9-224ENST00000483142 EFCAB5A4FU69 1503 aa7.62□□□□□ -1.19
HDAC9-224ENST00000483142 SLC4A2P04920 1241 aa7.62□□□□□ -1.19
HDAC9-224ENST00000483142 KIAA0556O60303 1618 aa7.61□□□□□ -1.19
HDAC9-224ENST00000483142 TNIKQ9UKE5 1360 aa7.59□□□□□ -1.2
HDAC9-224ENST00000483142 DISP1Q96F81 1524 aa7.57□□□□□ -1.2
HDAC9-224ENST00000483142 CHMP7Q8WUX9 453 aaPredicted RBP7.56□□□□□ -1.2
HDAC9-224ENST00000483142 ARHGEF11O15085 1522 aa7.54□□□□□ -1.2
HDAC9-224ENST00000483142 ARHGAP35Q9NRY4 1499 aa7.54□□□□□ -1.2
HDAC9-224ENST00000483142 ERCC6L2Q5T890 1561 aa7.54□□□□□ -1.2
HDAC9-224ENST00000483142 CEP162Q5TB80 1403 aa7.52□□□□□ -1.2
HDAC9-224ENST00000483142 RIMBP3CA6NJZ7 1639 aa7.52□□□□□ -1.2
HDAC9-224ENST00000483142 RIMBP3BA6NNM3 1639 aa7.52□□□□□ -1.2
HDAC9-224ENST00000483142 RIMBP3Q9UFD9 1639 aa7.52□□□□□ -1.2
HDAC9-224ENST00000483142 ARAP1Q96P48 1450 aa7.52□□□□□ -1.21
HDAC9-224ENST00000483142 FAM9AQ8IZU1 332 aaPredicted RBP7.52□□□□□ -1.21
HDAC9-224ENST00000483142 CLIP1P30622 1438 aa7.51□□□□□ -1.21
HDAC9-224ENST00000483142 ABCA8O94911 1581 aa7.5□□□□□ -1.21
HDAC9-224ENST00000483142 OSCARQ8IYS5 282 aa7.5□□□□□ -1.21
HDAC9-224ENST00000483142 CARMIL2Q6F5E8 1435 aa7.5□□□□□ -1.21
HDAC9-224ENST00000483142 PRG4Q92954 1404 aaPredicted RBP7.5□□□□□ -1.21
HDAC9-224ENST00000483142 PCF11O94913 1555 aaKnown RBP7.49□□□□□ -1.21
HDAC9-224ENST00000483142 UHRF1BP1LA0JNW5 1464 aa7.49□□□□□ -1.21
HDAC9-224ENST00000483142 FBLN2P98095 1184 aa7.48□□□□□ -1.21
HDAC9-224ENST00000483142 HECW1Q76N89 1606 aa7.48□□□□□ -1.21
HDAC9-224ENST00000483142 RAPGEF6Q8TEU7 1601 aa7.48□□□□□ -1.21
HDAC9-224ENST00000483142 CFAP43Q8NDM7 1665 aa7.47□□□□□ -1.21
HDAC9-224ENST00000483142 ABCC2Q92887 1545 aa7.47□□□□□ -1.21
HDAC9-224ENST00000483142 FHOD3Q2V2M9 1422 aa7.47□□□□□ -1.21
HDAC9-224ENST00000483142 FMN1Q68DA7 1419 aa7.47□□□□□ -1.21
HDAC9-224ENST00000483142 FYCO1Q9BQS8 1478 aa7.47□□□□□ -1.21
HDAC9-224ENST00000483142 VPS8Q8N3P4 1428 aa7.46□□□□□ -1.21
HDAC9-224ENST00000483142 ADCY10Q96PN6 1610 aa7.46□□□□□ -1.21
HDAC9-224ENST00000483142 JPH4Q96JJ6 628 aa7.46□□□□□ -1.22
HDAC9-224ENST00000483142 LRRIQ1Q96JM4 1722 aa7.44□□□□□ -1.22
HDAC9-224ENST00000483142 CASKIN1Q8WXD9 1431 aa7.44□□□□□ -1.22
HDAC9-224ENST00000483142 NUP153P49790 1475 aaKnown RBP7.43□□□□□ -1.22
HDAC9-224ENST00000483142 MAP3K1Q13233 1512 aa7.43□□□□□ -1.22
HDAC9-224ENST00000483142 KDM5BQ9UGL1 1544 aa7.43□□□□□ -1.22
HDAC9-224ENST00000483142 UBTFP17480 764 aaKnown RBP7.43□□□□□ -1.22
HDAC9-224ENST00000483142 MAPKBP1O60336 1514 aa7.42□□□□□ -1.22
HDAC9-224ENST00000483142 UACAQ9BZF9 1416 aa7.42□□□□□ -1.22
HDAC9-224ENST00000483142 CCDC18Q5T9S5 1454 aa7.42□□□□□ -1.22
HDAC9-224ENST00000483142 PLB1Q6P1J6 1458 aa7.42□□□□□ -1.22
HDAC9-224ENST00000483142 ZCCHC11Q5TAX3 1644 aaKnown RBP7.41□□□□□ -1.22
HDAC9-224ENST00000483142 PTPRGP23470 1445 aa7.41□□□□□ -1.22
HDAC9-224ENST00000483142 TIAM1Q13009 1591 aa7.41□□□□□ -1.22
HDAC9-224ENST00000483142 EPRSP07814 1512 aaKnown RBP7.39□□□□□ -1.23
HDAC9-224ENST00000483142 LOC105371045A0A1W2PR82 267 aa7.39□□□□□ -1.23
HDAC9-224ENST00000483142 MYCNP04198 464 aaPredicted RBP7.39□□□□□ -1.23
HDAC9-224ENST00000483142 EHBP1L1Q8N3D4 1523 aa7.38□□□□□ -1.23
HDAC9-224ENST00000483142 ATXN8OSP0DMR3 200 aa7.38□□□□□ -1.23
HDAC9-224ENST00000483142 DNAJC5Q9H3Z4 198 aa7.38□□□□□ -1.23
HDAC9-224ENST00000483142 CDK13Q14004 1512 aaKnown RBP7.37□□□□□ -1.23
HDAC9-224ENST00000483142 MAGI3Q5TCQ9 1506 aa7.36□□□□□ -1.23
HDAC9-224ENST00000483142 ATP10BO94823 1461 aa7.35□□□□□ -1.23
HDAC9-224ENST00000483142 GLI2P10070 1586 aa7.34□□□□□ -1.23
HDAC9-224ENST00000483142 DIP2BQ9P265 1576 aa7.34□□□□□ -1.23
HDAC9-224ENST00000483142 WDR7Q9Y4E6 1490 aa7.34□□□□□ -1.23
HDAC9-224ENST00000483142 KIF14Q15058 1648 aa7.34□□□□□ -1.24
HDAC9-224ENST00000483142 ABCA9Q8IUA7 1624 aa7.34□□□□□ -1.24
HDAC9-224ENST00000483142 ARAP3Q8WWN8 1544 aa7.33□□□□□ -1.24
HDAC9-224ENST00000483142 TROQ12816 1431 aaPredicted RBP7.33□□□□□ -1.24
HDAC9-224ENST00000483142 LRRC9Q6ZRR7 1453 aa7.32□□□□□ -1.24
HDAC9-224ENST00000483142 SUPT6HQ7KZ85 1726 aaKnown RBP7.32□□□□□ -1.24
HDAC9-224ENST00000483142 ABCC10Q5T3U5 1492 aa7.31□□□□□ -1.24
HDAC9-224ENST00000483142 MAP3K4Q9Y6R4 1608 aa7.31□□□□□ -1.24
HDAC9-224ENST00000483142 TTC37Q6PGP7 1564 aa7.31□□□□□ -1.24
HDAC9-224ENST00000483142 KIF13AQ9H1H9 1805 aa7.31□□□□□ -1.24
HDAC9-224ENST00000483142 ITSN2Q9NZM3 1697 aa7.31□□□□□ -1.24
HDAC9-224ENST00000483142 PREX2Q70Z35 1606 aa7.3□□□□□ -1.24
HDAC9-224ENST00000483142 ASXL2Q76L83 1435 aa7.3□□□□□ -1.24
HDAC9-224ENST00000483142 ATF5Q9Y2D1 282 aaPredicted RBP7.3□□□□□ -1.24
HDAC9-224ENST00000483142 PPRC1Q5VV67 1664 aaKnown RBP7.29□□□□□ -1.24
HDAC9-224ENST00000483142 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.29□□□□□ -1.24
HDAC9-224ENST00000483142 P3H3Q8IVL6 736 aa7.29□□□□□ -1.24
HDAC9-224ENST00000483142 MYO5CQ9NQX4 1742 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms