RNA–Protein interactions for RNA: ENST00000483115.1

FUNDC1-202, Transcript of FUN14 domain containing 1, humanhuman

TSL 2

Gene FUNDC1, Length 1,069 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUNDC1-202ENST00000483115 TOP2AP11388 1531 aaKnown RBP11.43□□□□□ -0.58
FUNDC1-202ENST00000483115 FXR2P51116 673 aaKnown RBP eCLIP11.41□□□□□ -0.58
FUNDC1-202ENST00000483115 PIP4P2Q8N4L2 257 aa11.41□□□□□ -0.58
FUNDC1-202ENST00000483115 PRR29P0C7W0 189 aa11.33□□□□□ -0.6
FUNDC1-202ENST00000483115 STAG3Q9UJ98 1225 aa11.32□□□□□ -0.6
FUNDC1-202ENST00000483115 PRKAR2AP13861 404 aaKnown RBP11.26□□□□□ -0.61
FUNDC1-202ENST00000483115 VASPP50552 380 aaPredicted RBP11.26□□□□□ -0.61
FUNDC1-202ENST00000483115 CCDC88BA6NC98 1476 aa11.24□□□□□ -0.61
FUNDC1-202ENST00000483115 CHADLQ6NUI6 762 aa11.19□□□□□ -0.62
FUNDC1-202ENST00000483115 LAMC3Q9Y6N6 1575 aa11.19□□□□□ -0.62
FUNDC1-202ENST00000483115 PRDM2Q13029 1718 aa11.18□□□□□ -0.62
FUNDC1-202ENST00000483115 CADPSQ9ULU8 1353 aa11.14□□□□□ -0.63
FUNDC1-202ENST00000483115 CREBZFQ9NS37 354 aa11.12□□□□□ -0.63
FUNDC1-202ENST00000483115 HAX1O00165 279 aa11.11□□□□□ -0.63
FUNDC1-202ENST00000483115 CFTRP13569 1480 aa11.11□□□□□ -0.63
FUNDC1-202ENST00000483115 PDS5BQ9NTI5 1447 aa11.1□□□□□ -0.63
FUNDC1-202ENST00000483115 IFNLR1Q8IU57 520 aaPredicted RBP11.1□□□□□ -0.63
FUNDC1-202ENST00000483115 ERCC6Q03468 1493 aa11.1□□□□□ -0.63
FUNDC1-202ENST00000483115 NESP48681 1621 aa11.09□□□□□ -0.63
FUNDC1-202ENST00000483115 FARP1Q9Y4F1 1045 aaPredicted RBP11.08□□□□□ -0.64
FUNDC1-202ENST00000483115 KIF21AQ7Z4S6 1674 aa11.06□□□□□ -0.64
FUNDC1-202ENST00000483115 CEP164Q9UPV0 1460 aa11.06□□□□□ -0.64
FUNDC1-202ENST00000483115 FANCD2Q9BXW9 1451 aa11.05□□□□□ -0.64
FUNDC1-202ENST00000483115 C19orf67A6NJJ6 358 aa11.03□□□□□ -0.64
FUNDC1-202ENST00000483115 KLHL34Q8N239 644 aa11.01□□□□□ -0.65
FUNDC1-202ENST00000483115 PLCD3Q8N3E9 789 aa11.01□□□□□ -0.65
FUNDC1-202ENST00000483115 EVX2Q03828 476 aa10.99□□□□□ -0.65
FUNDC1-202ENST00000483115 SP7Q8TDD2 431 aaPredicted RBP10.98□□□□□ -0.65
FUNDC1-202ENST00000483115 PLEKHG5O94827 1062 aa10.97□□□□□ -0.65
FUNDC1-202ENST00000483115 MNX1P50219 401 aaPredicted RBP10.97□□□□□ -0.65
FUNDC1-202ENST00000483115 MIER1Q8N108 512 aa10.97□□□□□ -0.65
FUNDC1-202ENST00000483115 MRC2Q9UBG0 1479 aa10.96□□□□□ -0.65
FUNDC1-202ENST00000483115 SPOCK2Q92563 424 aa10.96□□□□□ -0.65
FUNDC1-202ENST00000483115 ABCC8Q09428 1581 aa10.95□□□□□ -0.66
FUNDC1-202ENST00000483115 NPM1P06748 294 aaKnown RBP eCLIP10.95□□□□□ -0.66
FUNDC1-202ENST00000483115 WRNQ14191 1432 aaPredicted RBP eCLIP10.93□□□□□ -0.66
FUNDC1-202ENST00000483115 SLC24A1O60721 1099 aa10.93□□□□□ -0.66
FUNDC1-202ENST00000483115 DNMBPQ6XZF7 1577 aa10.93□□□□□ -0.66
FUNDC1-202ENST00000483115 THOC2Q8NI27 1593 aaKnown RBP10.92□□□□□ -0.66
FUNDC1-202ENST00000483115 CD44P16070 742 aaKnown RBP10.92□□□□□ -0.66
FUNDC1-202ENST00000483115 ZBTB47Q9UFB7 747 aaPredicted RBP10.92□□□□□ -0.66
FUNDC1-202ENST00000483115 WDR62O43379 1518 aa10.89□□□□□ -0.67
FUNDC1-202ENST00000483115 BIVM-ERCC5R4GMW8 1640 aa10.89□□□□□ -0.67
FUNDC1-202ENST00000483115 URB2Q14146 1524 aaKnown RBP10.88□□□□□ -0.67
FUNDC1-202ENST00000483115 TOPBP1Q92547 1522 aa10.88□□□□□ -0.67
FUNDC1-202ENST00000483115 TOP2BQ02880 1626 aa10.87□□□□□ -0.67
FUNDC1-202ENST00000483115 TRIM41Q8WV44 630 aa10.87□□□□□ -0.67
FUNDC1-202ENST00000483115 CUX1P39880 1505 aa10.87□□□□□ -0.67
FUNDC1-202ENST00000483115 SYNJ1O43426 1573 aa10.86□□□□□ -0.67
FUNDC1-202ENST00000483115 PKD2Q13563 968 aa10.86□□□□□ -0.67
FUNDC1-202ENST00000483115 CUX2O14529 1486 aa10.83□□□□□ -0.68
FUNDC1-202ENST00000483115 FGD5Q6ZNL6 1462 aa10.83□□□□□ -0.68
FUNDC1-202ENST00000483115 ZRANB1Q9UGI0 708 aa10.82□□□□□ -0.68
FUNDC1-202ENST00000483115 PAK3O75914 559 aaPredicted RBP10.81□□□□□ -0.68
FUNDC1-202ENST00000483115 POLA1P09884 1462 aaPredicted RBP10.8□□□□□ -0.68
FUNDC1-202ENST00000483115 ZNF579Q8NAF0 562 aaKnown RBP10.79□□□□□ -0.68
FUNDC1-202ENST00000483115 SOGA1O94964 1423 aa10.78□□□□□ -0.68
FUNDC1-202ENST00000483115 GABBR2O75899 941 aa10.78□□□□□ -0.68
FUNDC1-202ENST00000483115 IFT140Q96RY7 1462 aa10.78□□□□□ -0.68
FUNDC1-202ENST00000483115 ECM2O94769 699 aaPredicted RBP10.77□□□□□ -0.69
FUNDC1-202ENST00000483115 CLCN6P51797 869 aa10.77□□□□□ -0.69
FUNDC1-202ENST00000483115 WDR97A6NE52 1622 aa10.74□□□□□ -0.69
FUNDC1-202ENST00000483115 TARBP1Q13395 1621 aaKnown RBP10.73□□□□□ -0.69
FUNDC1-202ENST00000483115 RAD54L2Q9Y4B4 1467 aa10.73□□□□□ -0.69
FUNDC1-202ENST00000483115 NUBP1P53384 320 aa10.72□□□□□ -0.69
FUNDC1-202ENST00000483115 RASEFQ8IZ41 740 aa10.72□□□□□ -0.69
FUNDC1-202ENST00000483115 TSPYL2Q9H2G4 693 aaPredicted RBP10.72□□□□□ -0.69
FUNDC1-202ENST00000483115 CIZ1Q9ULV3 898 aaPredicted RBP10.72□□□□□ -0.69
FUNDC1-202ENST00000483115 KIF27Q86VH2 1401 aa10.71□□□□□ -0.69
FUNDC1-202ENST00000483115 ABCA10Q8WWZ4 1543 aa10.71□□□□□ -0.69
FUNDC1-202ENST00000483115 EIF4G3O43432 1585 aaKnown RBP10.7□□□□□ -0.7
FUNDC1-202ENST00000483115 PBRM1Q86U86 1689 aa10.69□□□□□ -0.7
FUNDC1-202ENST00000483115 EEA1Q15075 1411 aa10.68□□□□□ -0.7
FUNDC1-202ENST00000483115 PHF12Q96QT6 1004 aa10.68□□□□□ -0.7
FUNDC1-202ENST00000483115 CCDC61Q9Y6R9 512 aa10.68□□□□□ -0.7
FUNDC1-202ENST00000483115 ABCA5Q8WWZ7 1642 aa10.67□□□□□ -0.7
FUNDC1-202ENST00000483115 GSE1Q14687 1217 aa10.67□□□□□ -0.7
FUNDC1-202ENST00000483115 GAPVD1Q14C86 1478 aa10.67□□□□□ -0.7
FUNDC1-202ENST00000483115 TDRD9Q8NDG6 1382 aaKnown RBP10.65□□□□□ -0.7
FUNDC1-202ENST00000483115 ZNF608Q9ULD9 1512 aaPredicted RBP10.64□□□□□ -0.71
FUNDC1-202ENST00000483115 CUL7Q14999 1698 aa10.64□□□□□ -0.71
FUNDC1-202ENST00000483115 GRIN2BQ13224 1484 aa10.64□□□□□ -0.71
FUNDC1-202ENST00000483115 FAM9AQ8IZU1 332 aaPredicted RBP10.64□□□□□ -0.71
FUNDC1-202ENST00000483115 FAM212AQ96EL1 285 aa10.64□□□□□ -0.71
FUNDC1-202ENST00000483115 AQRO60306 1485 aaKnown RBP eCLIP10.63□□□□□ -0.71
FUNDC1-202ENST00000483115 PLCB2Q00722 1185 aa10.63□□□□□ -0.71
FUNDC1-202ENST00000483115 ERICH3Q5RHP9 1530 aa10.63□□□□□ -0.71
FUNDC1-202ENST00000483115 RGL2O15211 777 aa10.61□□□□□ -0.71
FUNDC1-202ENST00000483115 GALR2O43603 387 aaPredicted RBP10.61□□□□□ -0.71
FUNDC1-202ENST00000483115 KIF12Q96FN5 646 aa10.6□□□□□ -0.71
FUNDC1-202ENST00000483115 MAGI1Q96QZ7 1491 aaPredicted RBP10.6□□□□□ -0.71
FUNDC1-202ENST00000483115 SNAPC4Q5SXM2 1469 aa10.59□□□□□ -0.71
FUNDC1-202ENST00000483115 DCAF8Q5TAQ9 597 aa10.58□□□□□ -0.72
FUNDC1-202ENST00000483115 RUSC2Q8N2Y8 1516 aa10.58□□□□□ -0.72
FUNDC1-202ENST00000483115 ADAMTS12P58397 1594 aa10.57□□□□□ -0.72
FUNDC1-202ENST00000483115 MS4A3Q96HJ5 214 aa10.56□□□□□ -0.72
FUNDC1-202ENST00000483115 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.56□□□□□ -0.72
FUNDC1-202ENST00000483115 CHMP7Q8WUX9 453 aaPredicted RBP10.55□□□□□ -0.72
FUNDC1-202ENST00000483115 BBXQ8WY36 941 aaPredicted RBP10.55□□□□□ -0.72
FUNDC1-202ENST00000483115 DCBLD2Q96PD2 775 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms