RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 BCANQ96GW7 911 aa13.49□□□□□ -0.25
TVP23B-203ENST00000482741 EFCAB5A4FU69 1503 aa13.47□□□□□ -0.25
TVP23B-203ENST00000482741 UGGT2Q9NYU1 1516 aa13.45□□□□□ -0.26
TVP23B-203ENST00000482741 MAP3K1Q13233 1512 aa13.45□□□□□ -0.26
TVP23B-203ENST00000482741 CHD1O14646 1710 aa13.44□□□□□ -0.26
TVP23B-203ENST00000482741 DNAJC5BQ9UF47 199 aa13.41□□□□□ -0.26
TVP23B-203ENST00000482741 NUP160Q12769 1436 aa13.41□□□□□ -0.26
TVP23B-203ENST00000482741 CFAP43Q8NDM7 1665 aa13.39□□□□□ -0.27
TVP23B-203ENST00000482741 ADCY10Q96PN6 1610 aa13.39□□□□□ -0.27
TVP23B-203ENST00000482741 AQRO60306 1485 aaKnown RBP eCLIP13.37□□□□□ -0.27
TVP23B-203ENST00000482741 GRIN2BQ13224 1484 aa13.37□□□□□ -0.27
TVP23B-203ENST00000482741 SYNJ2O15056 1496 aa13.31□□□□□ -0.28
TVP23B-203ENST00000482741 CEP170Q5SW79 1584 aa13.31□□□□□ -0.28
TVP23B-203ENST00000482741 FHAD1B1AJZ9 1412 aa13.29□□□□□ -0.28
TVP23B-203ENST00000482741 LRRIQ1Q96JM4 1722 aa13.27□□□□□ -0.28
TVP23B-203ENST00000482741 KIF27Q86VH2 1401 aa13.26□□□□□ -0.29
TVP23B-203ENST00000482741 GAPVD1Q14C86 1478 aa13.24□□□□□ -0.29
TVP23B-203ENST00000482741 KIAA0556O60303 1618 aa13.23□□□□□ -0.29
TVP23B-203ENST00000482741 KDM5BQ9UGL1 1544 aa13.23□□□□□ -0.29
TVP23B-203ENST00000482741 UHRF1BP1LA0JNW5 1464 aa13.23□□□□□ -0.29
TVP23B-203ENST00000482741 IQGAP2Q13576 1575 aa13.22□□□□□ -0.29
TVP23B-203ENST00000482741 FBLN2P98095 1184 aa13.21□□□□□ -0.29
TVP23B-203ENST00000482741 DNAJC5Q9H3Z4 198 aa13.21□□□□□ -0.29
TVP23B-203ENST00000482741 GRIN2AQ12879 1464 aa13.21□□□□□ -0.29
TVP23B-203ENST00000482741 RAPGEF2Q9Y4G8 1499 aa13.2□□□□□ -0.3
TVP23B-203ENST00000482741 ABCA8O94911 1581 aa13.18□□□□□ -0.3
TVP23B-203ENST00000482741 ARXQ96QS3 562 aa13.18□□□□□ -0.3
TVP23B-203ENST00000482741 SOGA1O94964 1423 aa13.17□□□□□ -0.3
TVP23B-203ENST00000482741 GOLGA3Q08378 1498 aa13.17□□□□□ -0.3
TVP23B-203ENST00000482741 ARHGEF11O15085 1522 aa13.17□□□□□ -0.3
TVP23B-203ENST00000482741 KIAA0586Q9BVV6 1533 aa13.17□□□□□ -0.3
TVP23B-203ENST00000482741 BCORL1Q5H9F3 1711 aa13.16□□□□□ -0.3
TVP23B-203ENST00000482741 ARAP3Q8WWN8 1544 aa13.16□□□□□ -0.3
TVP23B-203ENST00000482741 FOXD4L1Q9NU39 408 aa13.15□□□□□ -0.3
TVP23B-203ENST00000482741 IGF1RP08069 1367 aa13.14□□□□□ -0.31
TVP23B-203ENST00000482741 KDM2AQ9Y2K7 1162 aa13.12□□□□□ -0.31
TVP23B-203ENST00000482741 GTF3C3Q9Y5Q9 886 aa13.11□□□□□ -0.31
TVP23B-203ENST00000482741 TNIKQ9UKE5 1360 aa13.1□□□□□ -0.31
TVP23B-203ENST00000482741 PODXL2Q9NZ53 605 aa13.1□□□□□ -0.31
TVP23B-203ENST00000482741 ERCC6Q03468 1493 aa13.09□□□□□ -0.31
TVP23B-203ENST00000482741 GLI2P10070 1586 aa13.09□□□□□ -0.31
TVP23B-203ENST00000482741 SNAPC4Q5SXM2 1469 aa13.08□□□□□ -0.32
TVP23B-203ENST00000482741 DISP1Q96F81 1524 aa13.07□□□□□ -0.32
TVP23B-203ENST00000482741 ZNF608Q9ULD9 1512 aaPredicted RBP13.07□□□□□ -0.32
TVP23B-203ENST00000482741 RAD54L2Q9Y4B4 1467 aa13.06□□□□□ -0.32
TVP23B-203ENST00000482741 HECW1Q76N89 1606 aa13.04□□□□□ -0.32
TVP23B-203ENST00000482741 FYCO1Q9BQS8 1478 aa13.03□□□□□ -0.32
TVP23B-203ENST00000482741 FOXD1Q16676 465 aa13.02□□□□□ -0.33
TVP23B-203ENST00000482741 HOMEZQ8IX15 550 aa13.02□□□□□ -0.33
TVP23B-203ENST00000482741 MAPKBP1O60336 1514 aa13.02□□□□□ -0.33
TVP23B-203ENST00000482741 RAPGEF6Q8TEU7 1601 aa13.02□□□□□ -0.33
TVP23B-203ENST00000482741 CROCC2H7BZ55 1655 aa13.02□□□□□ -0.33
TVP23B-203ENST00000482741 SUPT5HO00267 1087 aaKnown RBP12.98□□□□□ -0.33
TVP23B-203ENST00000482741 ARAP1Q96P48 1450 aa12.96□□□□□ -0.33
TVP23B-203ENST00000482741 CFAP74Q9C0B2 1584 aa12.96□□□□□ -0.33
TVP23B-203ENST00000482741 RANGAP1P46060 587 aaPredicted RBP12.96□□□□□ -0.34
TVP23B-203ENST00000482741 KLHL34Q8N239 644 aa12.96□□□□□ -0.34
TVP23B-203ENST00000482741 MAP3K4Q9Y6R4 1608 aa12.95□□□□□ -0.34
TVP23B-203ENST00000482741 ITSN2Q9NZM3 1697 aa12.95□□□□□ -0.34
TVP23B-203ENST00000482741 MAST1Q9Y2H9 1570 aa12.94□□□□□ -0.34
TVP23B-203ENST00000482741 CCDC18Q5T9S5 1454 aa12.94□□□□□ -0.34
TVP23B-203ENST00000482741 ABCA9Q8IUA7 1624 aa12.93□□□□□ -0.34
TVP23B-203ENST00000482741 ABCC2Q92887 1545 aa12.91□□□□□ -0.34
TVP23B-203ENST00000482741 ARHGAP35Q9NRY4 1499 aa12.91□□□□□ -0.34
TVP23B-203ENST00000482741 FAM135AQ9P2D6 1515 aa12.9□□□□□ -0.34
TVP23B-203ENST00000482741 TIAM1Q13009 1591 aa12.9□□□□□ -0.34
TVP23B-203ENST00000482741 REREQ9P2R6 1566 aa12.89□□□□□ -0.35
TVP23B-203ENST00000482741 CFAP44Q96MT7 982 aa12.89□□□□□ -0.35
TVP23B-203ENST00000482741 PPRC1Q5VV67 1664 aaKnown RBP12.89□□□□□ -0.35
TVP23B-203ENST00000482741 WDR7Q9Y4E6 1490 aa12.89□□□□□ -0.35
TVP23B-203ENST00000482741 CASKIN1Q8WXD9 1431 aa12.88□□□□□ -0.35
TVP23B-203ENST00000482741 PREX2Q70Z35 1606 aa12.88□□□□□ -0.35
TVP23B-203ENST00000482741 PCF11O94913 1555 aaKnown RBP12.88□□□□□ -0.35
TVP23B-203ENST00000482741 C14orf37Q86TY3 774 aa12.88□□□□□ -0.35
TVP23B-203ENST00000482741 ZCCHC11Q5TAX3 1644 aaKnown RBP12.88□□□□□ -0.35
TVP23B-203ENST00000482741 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.87□□□□□ -0.35
TVP23B-203ENST00000482741 RIMBP3CA6NJZ7 1639 aa12.87□□□□□ -0.35
TVP23B-203ENST00000482741 RIMBP3BA6NNM3 1639 aa12.87□□□□□ -0.35
TVP23B-203ENST00000482741 RIMBP3Q9UFD9 1639 aa12.87□□□□□ -0.35
TVP23B-203ENST00000482741 CARMIL1Q5VZK9 1371 aa12.87□□□□□ -0.35
TVP23B-203ENST00000482741 EHBP1L1Q8N3D4 1523 aa12.85□□□□□ -0.35
TVP23B-203ENST00000482741 ADGBQ8N7X0 1667 aa12.84□□□□□ -0.35
TVP23B-203ENST00000482741 TCOF1Q13428 1488 aaKnown RBP12.84□□□□□ -0.35
TVP23B-203ENST00000482741 ARHGEF5Q12774 1597 aa12.83□□□□□ -0.36
TVP23B-203ENST00000482741 KIF13AQ9H1H9 1805 aa12.83□□□□□ -0.36
TVP23B-203ENST00000482741 CDC42BPAQ5VT25 1732 aa12.82□□□□□ -0.36
TVP23B-203ENST00000482741 VSIG10Q8N0Z9 540 aa12.82□□□□□ -0.36
TVP23B-203ENST00000482741 GCC2Q8IWJ2 1684 aa12.81□□□□□ -0.36
TVP23B-203ENST00000482741 SUPT6HQ7KZ85 1726 aaKnown RBP12.8□□□□□ -0.36
TVP23B-203ENST00000482741 PAXIP1Q6ZW49 1069 aaPredicted RBP12.79□□□□□ -0.36
TVP23B-203ENST00000482741 MYO5CQ9NQX4 1742 aa12.79□□□□□ -0.36
TVP23B-203ENST00000482741 PLXNC1O60486 1568 aa12.77□□□□□ -0.36
TVP23B-203ENST00000482741 NEURL4Q96JN8 1562 aa12.77□□□□□ -0.36
TVP23B-203ENST00000482741 EIF2AK4Q9P2K8 1649 aaKnown RBP12.77□□□□□ -0.37
TVP23B-203ENST00000482741 VPS8Q8N3P4 1428 aa12.77□□□□□ -0.37
TVP23B-203ENST00000482741 FMN1Q68DA7 1419 aa12.76□□□□□ -0.37
TVP23B-203ENST00000482741 TMEM132AQ24JP5 1023 aa12.76□□□□□ -0.37
TVP23B-203ENST00000482741 ZMYM4Q5VZL5 1548 aa12.76□□□□□ -0.37
TVP23B-203ENST00000482741 CDC42BPBQ9Y5S2 1711 aa12.75□□□□□ -0.37
TVP23B-203ENST00000482741 PIAS4Q8N2W9 510 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms