RNA–Protein interactions for RNA: ENST00000481897.1

RAB3IP-206, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 3,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-206ENST00000481897 SHROOM2Q13796 1616 aa4.73□□□□□ -1.65
RAB3IP-206ENST00000481897 KIF21BO75037 1637 aa4.73□□□□□ -1.65
RAB3IP-206ENST00000481897 SYNJ2O15056 1496 aa4.72□□□□□ -1.65
RAB3IP-206ENST00000481897 TRIM41Q8WV44 630 aa4.72□□□□□ -1.65
RAB3IP-206ENST00000481897 RNF39Q9H2S5 420 aa4.72□□□□□ -1.65
RAB3IP-206ENST00000481897 CLASP1Q7Z460 1538 aa4.72□□□□□ -1.65
RAB3IP-206ENST00000481897 FHAD1B1AJZ9 1412 aa4.71□□□□□ -1.66
RAB3IP-206ENST00000481897 SOGA1O94964 1423 aa4.71□□□□□ -1.66
RAB3IP-206ENST00000481897 KIF27Q86VH2 1401 aa4.71□□□□□ -1.66
RAB3IP-206ENST00000481897 GAPVD1Q14C86 1478 aa4.7□□□□□ -1.66
RAB3IP-206ENST00000481897 CTTNBP2Q8WZ74 1663 aa4.7□□□□□ -1.66
RAB3IP-206ENST00000481897 CHD1O14646 1710 aa4.69□□□□□ -1.66
RAB3IP-206ENST00000481897 NUP160Q12769 1436 aa4.69□□□□□ -1.66
RAB3IP-206ENST00000481897 RUSC2Q8N2Y8 1516 aa4.68□□□□□ -1.66
RAB3IP-206ENST00000481897 PPP4R3CPQ6ZMV5 832 aa4.68□□□□□ -1.66
RAB3IP-206ENST00000481897 EFCAB5A4FU69 1503 aa4.67□□□□□ -1.66
RAB3IP-206ENST00000481897 GRIN2AQ12879 1464 aa4.67□□□□□ -1.66
RAB3IP-206ENST00000481897 UGGT2Q9NYU1 1516 aa4.66□□□□□ -1.66
RAB3IP-206ENST00000481897 PRXQ9BXM0 1461 aa4.66□□□□□ -1.66
RAB3IP-206ENST00000481897 SNAPC4Q5SXM2 1469 aa4.65□□□□□ -1.67
RAB3IP-206ENST00000481897 KIAA0586Q9BVV6 1533 aa4.65□□□□□ -1.67
RAB3IP-206ENST00000481897 GOLGA3Q08378 1498 aa4.65□□□□□ -1.67
RAB3IP-206ENST00000481897 RAPGEF2Q9Y4G8 1499 aa4.64□□□□□ -1.67
RAB3IP-206ENST00000481897 SAMD9Q5K651 1589 aa4.63□□□□□ -1.67
RAB3IP-206ENST00000481897 IQGAP2Q13576 1575 aa4.63□□□□□ -1.67
RAB3IP-206ENST00000481897 ZNF608Q9ULD9 1512 aaPredicted RBP4.63□□□□□ -1.67
RAB3IP-206ENST00000481897 UHRF1BP1LA0JNW5 1464 aa4.62□□□□□ -1.67
RAB3IP-206ENST00000481897 CEP170Q5SW79 1584 aa4.62□□□□□ -1.67
RAB3IP-206ENST00000481897 RAD54L2Q9Y4B4 1467 aa4.62□□□□□ -1.67
RAB3IP-206ENST00000481897 SUPT5HO00267 1087 aaKnown RBP4.61□□□□□ -1.67
RAB3IP-206ENST00000481897 IGF1RP08069 1367 aa4.6□□□□□ -1.67
RAB3IP-206ENST00000481897 FBXO41Q8TF61 875 aa4.6□□□□□ -1.67
RAB3IP-206ENST00000481897 AQRO60306 1485 aaKnown RBP eCLIP4.59□□□□□ -1.67
RAB3IP-206ENST00000481897 KIAA0556O60303 1618 aa4.59□□□□□ -1.67
RAB3IP-206ENST00000481897 MAPK8IP2Q13387 824 aaPredicted RBP4.59□□□□□ -1.67
RAB3IP-206ENST00000481897 MAPKBP1O60336 1514 aa4.58□□□□□ -1.68
RAB3IP-206ENST00000481897 CARMIL1Q5VZK9 1371 aa4.58□□□□□ -1.68
RAB3IP-206ENST00000481897 CARMIL2Q6F5E8 1435 aa4.58□□□□□ -1.68
RAB3IP-206ENST00000481897 SP7Q8TDD2 431 aaPredicted RBP4.58□□□□□ -1.68
RAB3IP-206ENST00000481897 MAP3K1Q13233 1512 aa4.57□□□□□ -1.68
RAB3IP-206ENST00000481897 RIMBP3CA6NJZ7 1639 aa4.57□□□□□ -1.68
RAB3IP-206ENST00000481897 RIMBP3BA6NNM3 1639 aa4.57□□□□□ -1.68
RAB3IP-206ENST00000481897 RIMBP3Q9UFD9 1639 aa4.57□□□□□ -1.68
RAB3IP-206ENST00000481897 GLI2P10070 1586 aa4.57□□□□□ -1.68
RAB3IP-206ENST00000481897 ARHGEF11O15085 1522 aa4.56□□□□□ -1.68
RAB3IP-206ENST00000481897 ARAP3Q8WWN8 1544 aa4.56□□□□□ -1.68
RAB3IP-206ENST00000481897 OSCARQ8IYS5 282 aa4.55□□□□□ -1.68
RAB3IP-206ENST00000481897 ABCA8O94911 1581 aa4.55□□□□□ -1.68
RAB3IP-206ENST00000481897 CFAP74Q9C0B2 1584 aa4.55□□□□□ -1.68
RAB3IP-206ENST00000481897 HECW1Q76N89 1606 aa4.55□□□□□ -1.68
RAB3IP-206ENST00000481897 ABCC2Q92887 1545 aa4.55□□□□□ -1.68
RAB3IP-206ENST00000481897 ADCY10Q96PN6 1610 aa4.54□□□□□ -1.68
RAB3IP-206ENST00000481897 KDM5BQ9UGL1 1544 aa4.54□□□□□ -1.68
RAB3IP-206ENST00000481897 TDRD9Q8NDG6 1382 aaKnown RBP4.54□□□□□ -1.68
RAB3IP-206ENST00000481897 CCDC18Q5T9S5 1454 aa4.54□□□□□ -1.68
RAB3IP-206ENST00000481897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.54□□□□□ -1.68
RAB3IP-206ENST00000481897 HNRNPUL2Q1KMD3 747 aaKnown RBP4.54□□□□□ -1.68
RAB3IP-206ENST00000481897 TNIKQ9UKE5 1360 aa4.53□□□□□ -1.68
RAB3IP-206ENST00000481897 DISP1Q96F81 1524 aa4.53□□□□□ -1.68
RAB3IP-206ENST00000481897 CFAP43Q8NDM7 1665 aa4.53□□□□□ -1.68
RAB3IP-206ENST00000481897 FMN1Q68DA7 1419 aa4.53□□□□□ -1.68
RAB3IP-206ENST00000481897 RAPGEF6Q8TEU7 1601 aa4.52□□□□□ -1.69
RAB3IP-206ENST00000481897 PHLDB1Q86UU1 1377 aa4.52□□□□□ -1.69
RAB3IP-206ENST00000481897 FYCO1Q9BQS8 1478 aa4.52□□□□□ -1.69
RAB3IP-206ENST00000481897 CSRNP3Q8WYN3 585 aa4.51□□□□□ -1.69
RAB3IP-206ENST00000481897 FAM9AQ8IZU1 332 aaPredicted RBP4.51□□□□□ -1.69
RAB3IP-206ENST00000481897 CHMP7Q8WUX9 453 aaPredicted RBP4.51□□□□□ -1.69
RAB3IP-206ENST00000481897 PLB1Q6P1J6 1458 aa4.51□□□□□ -1.69
RAB3IP-206ENST00000481897 ARAP1Q96P48 1450 aa4.51□□□□□ -1.69
RAB3IP-206ENST00000481897 FAM135AQ9P2D6 1515 aa4.49□□□□□ -1.69
RAB3IP-206ENST00000481897 PRG4Q92954 1404 aaPredicted RBP4.49□□□□□ -1.69
RAB3IP-206ENST00000481897 ABCA9Q8IUA7 1624 aa4.49□□□□□ -1.69
RAB3IP-206ENST00000481897 ZCCHC11Q5TAX3 1644 aaKnown RBP4.48□□□□□ -1.69
RAB3IP-206ENST00000481897 MAP3K4Q9Y6R4 1608 aa4.48□□□□□ -1.69
RAB3IP-206ENST00000481897 UACAQ9BZF9 1416 aa4.48□□□□□ -1.69
RAB3IP-206ENST00000481897 ITSN2Q9NZM3 1697 aa4.48□□□□□ -1.69
RAB3IP-206ENST00000481897 CASKIN1Q8WXD9 1431 aa4.48□□□□□ -1.69
RAB3IP-206ENST00000481897 SPATA31D1Q6ZQQ2 1576 aa4.48□□□□□ -1.69
RAB3IP-206ENST00000481897 WDR7Q9Y4E6 1490 aa4.47□□□□□ -1.69
RAB3IP-206ENST00000481897 DIP2BQ9P265 1576 aa4.47□□□□□ -1.69
RAB3IP-206ENST00000481897 EHBP1L1Q8N3D4 1523 aa4.47□□□□□ -1.69
RAB3IP-206ENST00000481897 RBAK-RBAKDNI3L0D1 243 aa4.47□□□□□ -1.69
RAB3IP-206ENST00000481897 MAGI3Q5TCQ9 1506 aa4.46□□□□□ -1.69
RAB3IP-206ENST00000481897 TEX14Q8IWB6 1497 aa4.46□□□□□ -1.69
RAB3IP-206ENST00000481897 REREQ9P2R6 1566 aa4.46□□□□□ -1.7
RAB3IP-206ENST00000481897 KIF13AQ9H1H9 1805 aa4.46□□□□□ -1.7
RAB3IP-206ENST00000481897 ARHGAP35Q9NRY4 1499 aa4.45□□□□□ -1.7
RAB3IP-206ENST00000481897 KIF14Q15058 1648 aa4.45□□□□□ -1.7
RAB3IP-206ENST00000481897 DCAF8L1A6NGE4 600 aa4.45□□□□□ -1.7
RAB3IP-206ENST00000481897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.45□□□□□ -1.7
RAB3IP-206ENST00000481897 PTPRGP23470 1445 aa4.45□□□□□ -1.7
RAB3IP-206ENST00000481897 ABCC10Q5T3U5 1492 aa4.45□□□□□ -1.7
RAB3IP-206ENST00000481897 NEO1Q92859 1461 aa4.45□□□□□ -1.7
RAB3IP-206ENST00000481897 JPH4Q96JJ6 628 aa4.45□□□□□ -1.7
RAB3IP-206ENST00000481897 BCORL1Q5H9F3 1711 aa4.45□□□□□ -1.7
RAB3IP-206ENST00000481897 MYO5CQ9NQX4 1742 aa4.44□□□□□ -1.7
RAB3IP-206ENST00000481897 PREX2Q70Z35 1606 aa4.44□□□□□ -1.7
RAB3IP-206ENST00000481897 PLEKHH2Q8IVE3 1493 aa4.44□□□□□ -1.7
RAB3IP-206ENST00000481897 ACIN1Q9UKV3 1341 aaKnown RBP4.44□□□□□ -1.7
RAB3IP-206ENST00000481897 ZMYM4Q5VZL5 1548 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms