RNA–Protein interactions for RNA: ENST00000481110.6

FGFR3-208, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best) BASIC

Gene FGFR3, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-208ENST00000481110 FKBP8Q14318 412 aa22.91■■□□□ 1.26
FGFR3-208ENST00000481110 TSPY4P0CV99 314 aa22.9■■□□□ 1.26
FGFR3-208ENST00000481110 TSPY10P0CW01 314 aa22.9■■□□□ 1.26
FGFR3-208ENST00000481110 HNRNPUQ00839 825 aaKnown RBP eCLIP22.9■■□□□ 1.263e-6■■■□□ 14.8
FGFR3-208ENST00000481110 FAM9BQ8IZU0 186 aa22.89■■□□□ 1.25
FGFR3-208ENST00000481110 KCNH8Q96L42 1107 aa22.88■■□□□ 1.25
FGFR3-208ENST00000481110 SENP3-EIF4A1A0A087X0R7 540 aa22.85■■□□□ 1.25
FGFR3-208ENST00000481110 PLEKHD1A6NEE1 506 aa22.82■■□□□ 1.24
FGFR3-208ENST00000481110 CFDP1Q9UEE9 299 aaPredicted RBP22.81■■□□□ 1.24
FGFR3-208ENST00000481110 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
FGFR3-208ENST00000481110 FHAD1B1AJZ9 1412 aa22.79■■□□□ 1.24
FGFR3-208ENST00000481110 SALL2Q9Y467 1007 aaPredicted RBP22.78■■□□□ 1.24
FGFR3-208ENST00000481110 EIF4G1Q04637 1599 aaKnown RBP22.78■■□□□ 1.24
FGFR3-208ENST00000481110 CHGAP10645 457 aaKnown RBP22.77■■□□□ 1.24
FGFR3-208ENST00000481110 EIF4G2P78344 907 aaKnown RBP eCLIP22.73■■□□□ 1.23
FGFR3-208ENST00000481110 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
FGFR3-208ENST00000481110 RGL3Q3MIN7 710 aa22.71■■□□□ 1.23
FGFR3-208ENST00000481110 FHOD3Q2V2M9 1422 aa22.7■■□□□ 1.22
FGFR3-208ENST00000481110 MRS2Q9HD23 443 aa22.69■■□□□ 1.22
FGFR3-208ENST00000481110 CLSPNQ9HAW4 1339 aa22.68■■□□□ 1.22
FGFR3-208ENST00000481110 IRX6P78412 446 aaPredicted RBP22.67■■□□□ 1.22
FGFR3-208ENST00000481110 FOXD1Q16676 465 aa22.67■■□□□ 1.22
FGFR3-208ENST00000481110 RAB3GAP2Q9H2M9 1393 aa22.66■■□□□ 1.22
FGFR3-208ENST00000481110 PDS5BQ9NTI5 1447 aa22.65■■□□□ 1.22
FGFR3-208ENST00000481110 NPM1P06748 294 aaKnown RBP eCLIP22.65■■□□□ 1.22
FGFR3-208ENST00000481110 BCL11AQ9H165 835 aa22.63■■□□□ 1.21
FGFR3-208ENST00000481110 SETD5Q9C0A6 1442 aa22.62■■□□□ 1.21
FGFR3-208ENST00000481110 IGF1RP08069 1367 aa22.61■■□□□ 1.21
FGFR3-208ENST00000481110 PLPPR3Q6T4P5 718 aa22.61■■□□□ 1.21
FGFR3-208ENST00000481110 DAXXQ9UER7 740 aaPredicted RBP22.6■■□□□ 1.21
FGFR3-208ENST00000481110 SUPT16HQ9Y5B9 1047 aaKnown RBP22.6■■□□□ 1.21
FGFR3-208ENST00000481110 FANCD2Q9BXW9 1451 aa22.6■■□□□ 1.21
FGFR3-208ENST00000481110 TMC1Q8TDI8 760 aa22.59■■□□□ 1.21
FGFR3-208ENST00000481110 RTL5Q5HYW3 569 aaPredicted RBP22.58■■□□□ 1.2
FGFR3-208ENST00000481110 ANP32EQ9BTT0 268 aa22.58■■□□□ 1.2
FGFR3-208ENST00000481110 NCAPD3P42695 1498 aa22.56■■□□□ 1.2
FGFR3-208ENST00000481110 ARHGAP35Q9NRY4 1499 aa22.55■■□□□ 1.2
FGFR3-208ENST00000481110 RAD54L2Q9Y4B4 1467 aa22.53■■□□□ 1.2
FGFR3-208ENST00000481110 SYNJ1O43426 1573 aa22.52■■□□□ 1.2
FGFR3-208ENST00000481110 FGD5Q6ZNL6 1462 aa22.5■■□□□ 1.19
FGFR3-208ENST00000481110 FMN1Q68DA7 1419 aa22.48■■□□□ 1.19
FGFR3-208ENST00000481110 DHX57Q6P158 1386 aaKnown RBP22.46■■□□□ 1.19
FGFR3-208ENST00000481110 CARD11Q9BXL7 1154 aa22.43■■□□□ 1.18
FGFR3-208ENST00000481110 STAG3Q9UJ98 1225 aa22.4■■□□□ 1.18
FGFR3-208ENST00000481110 KIF21BO75037 1637 aa22.39■■□□□ 1.18
FGFR3-208ENST00000481110 BICRAQ9NZM4 1560 aa22.39■■□□□ 1.18
FGFR3-208ENST00000481110 PPP1R15AO75807 674 aaPredicted RBP22.39■■□□□ 1.17
FGFR3-208ENST00000481110 NBR1Q14596 966 aa22.38■■□□□ 1.17
FGFR3-208ENST00000481110 MPHOSPH9Q99550 1183 aa22.38■■□□□ 1.17
FGFR3-208ENST00000481110 DNAJC5BQ9UF47 199 aa22.37■■□□□ 1.17
FGFR3-208ENST00000481110 HSPA5P11021 654 aaKnown RBP22.36■■□□□ 1.17
FGFR3-208ENST00000481110 CANXP27824 592 aaKnown RBP22.36■■□□□ 1.17
FGFR3-208ENST00000481110 PKD2Q13563 968 aa22.36■■□□□ 1.17
FGFR3-208ENST00000481110 DCAF11Q8TEB1 546 aa22.35■■□□□ 1.17
FGFR3-208ENST00000481110 NESP48681 1621 aa22.35■■□□□ 1.17
FGFR3-208ENST00000481110 TIMELESSQ9UNS1 1208 aa22.35■■□□□ 1.17
FGFR3-208ENST00000481110 CFTRP13569 1480 aa22.34■■□□□ 1.17
FGFR3-208ENST00000481110 ARAP1Q96P48 1450 aa22.34■■□□□ 1.17
FGFR3-208ENST00000481110 JPH4Q96JJ6 628 aa22.33■■□□□ 1.17
FGFR3-208ENST00000481110 NPM2Q86SE8 214 aaKnown RBP22.3■■□□□ 1.16
FGFR3-208ENST00000481110 TSHZ2Q9NRE2 1034 aa22.3■■□□□ 1.16
FGFR3-208ENST00000481110 ESF1Q9H501 851 aaKnown RBP22.3■■□□□ 1.16
FGFR3-208ENST00000481110 L3MBTL2Q969R5 705 aa22.29■■□□□ 1.16
FGFR3-208ENST00000481110 CCDC136Q96JN2 1154 aa22.28■■□□□ 1.16
FGFR3-208ENST00000481110 PHLDB1Q86UU1 1377 aa22.27■■□□□ 1.16
FGFR3-208ENST00000481110 SLC24A1O60721 1099 aa22.26■■□□□ 1.15
FGFR3-208ENST00000481110 HNRNPMP52272 730 aaKnown RBP eCLIP22.26■■□□□ 1.155e-6■■□□□ 13.2
FGFR3-208ENST00000481110 GAPVD1Q14C86 1478 aa22.25■■□□□ 1.15
FGFR3-208ENST00000481110 CUX1P39880 1505 aa22.24■■□□□ 1.15
FGFR3-208ENST00000481110 AQRO60306 1485 aaKnown RBP eCLIP22.23■■□□□ 1.152e-7■■■■□ 19.6
FGFR3-208ENST00000481110 PRXQ9BXM0 1461 aa22.23■■□□□ 1.15
FGFR3-208ENST00000481110 CARMIL2Q6F5E8 1435 aa22.22■■□□□ 1.15
FGFR3-208ENST00000481110 WDR43Q15061 677 aaKnown RBP eCLIP22.22■■□□□ 1.151e-6■■■■■ 28.4
FGFR3-208ENST00000481110 NUP155O75694 1391 aa22.19■■□□□ 1.14
FGFR3-208ENST00000481110 ZNF644Q9H582 1327 aaPredicted RBP22.19■■□□□ 1.14
FGFR3-208ENST00000481110 ANP32AP39687 249 aaKnown RBP22.16■■□□□ 1.14
FGFR3-208ENST00000481110 RBM19Q9Y4C8 960 aaKnown RBP22.16■■□□□ 1.14
FGFR3-208ENST00000481110 NEFMP07197 916 aa22.15■■□□□ 1.14
FGFR3-208ENST00000481110 CC2D1BQ5T0F9 858 aaKnown RBP22.15■■□□□ 1.14
FGFR3-208ENST00000481110 TOP2BQ02880 1626 aa22.14■■□□□ 1.13
FGFR3-208ENST00000481110 PLEKHG5O94827 1062 aa22.11■■□□□ 1.13
FGFR3-208ENST00000481110 LRRC9Q6ZRR7 1453 aa22.09■■□□□ 1.13
FGFR3-208ENST00000481110 KNSTRNQ9Y448 316 aa22.09■■□□□ 1.13
FGFR3-208ENST00000481110 CC2D2AQ9P2K1 1620 aa22.09■■□□□ 1.13
FGFR3-208ENST00000481110 CCER2I3L3R5 266 aa22.08■■□□□ 1.13
FGFR3-208ENST00000481110 HMGXB3Q12766 1538 aa22.07■■□□□ 1.12
FGFR3-208ENST00000481110 ANKRD30AQ9BXX3 1397 aa22.06■■□□□ 1.12
FGFR3-208ENST00000481110 ERICH3Q5RHP9 1530 aa22.06■■□□□ 1.12
FGFR3-208ENST00000481110 CCDC18Q5T9S5 1454 aa22.06■■□□□ 1.12
FGFR3-208ENST00000481110 TNNT2P45379 298 aaPredicted RBP22.05■■□□□ 1.12
FGFR3-208ENST00000481110 GGT6Q6P531 493 aa22.04■■□□□ 1.12
FGFR3-208ENST00000481110 FGD6Q6ZV73 1430 aa22.04■■□□□ 1.12
FGFR3-208ENST00000481110 POLA1P09884 1462 aaPredicted RBP22.04■■□□□ 1.12
FGFR3-208ENST00000481110 EIF5BO60841 1220 aaKnown RBP22.03■■□□□ 1.12
FGFR3-208ENST00000481110 NEUROD2Q15784 382 aa22.02■■□□□ 1.12
FGFR3-208ENST00000481110 EFCAB2Q5VUJ9 269 aa22.02■■□□□ 1.12
FGFR3-208ENST00000481110 B4GALNT3Q6L9W6 998 aa22.02■■□□□ 1.12
FGFR3-208ENST00000481110 TOPBP1Q92547 1522 aa22.01■■□□□ 1.11
FGFR3-208ENST00000481110 UNC13AQ9UPW8 1703 aa22■■□□□ 1.11
FGFR3-208ENST00000481110 SAFB2Q14151 953 aaKnown RBP eCLIP21.95■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms